Mpay004580.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000006.1:12261164-12270012[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.11 9.1 7.4 1.3 3 23 211 232 210 232 0.92 2 23 0.24 19 6.4 0.3 1 22 609 630 609 630 0.95 3 23 4.7 3.8e+02 2.3 0.3 1 22 672 693 672 695 0.82 4 23 0.031 2.5 9.2 0.7 3 21 706 724 704 725 0.94 5 23 0.47 38 5.4 0.3 2 23 733 755 732 755 0.89 6 23 0.0042 0.34 11.9 0.1 3 23 776 797 774 797 0.96 7 23 0.0013 0.11 13.5 2.5 1 23 803 826 803 826 0.95 8 23 0.088 7.1 7.7 0.0 1 23 852 875 852 875 0.90 9 23 0.0039 0.31 12.0 3.5 1 23 880 902 880 902 0.97 10 23 0.0074 0.6 11.1 0.3 1 23 908 931 908 931 0.95 11 23 0.0016 0.13 13.2 1.3 1 23 945 967 945 967 0.97 12 23 0.00012 0.01 16.7 1.8 1 23 1016 1039 1016 1039 0.97 13 23 0.0034 0.27 12.2 1.7 1 23 1099 1122 1099 1122 0.96 14 23 0.00077 0.063 14.2 2.1 2 23 1144 1166 1143 1166 0.95 15 23 0.061 4.9 8.2 0.1 2 23 1172 1194 1171 1194 0.93 16 23 0.007 0.56 11.2 0.2 1 21 1237 1257 1237 1258 0.95 17 23 0.00029 0.024 15.5 1.0 1 23 1268 1290 1268 1290 0.93 18 23 6.2e-05 0.005 17.7 0.3 2 23 1381 1403 1381 1403 0.93 19 23 1.3e-07 1e-05 26.1 1.1 3 23 1410 1430 1409 1430 0.98 20 23 0.0041 0.33 11.9 0.5 2 23 1450 1471 1449 1472 0.94 21 23 0.085 6.8 7.8 0.0 1 23 1492 1514 1492 1514 0.97 22 23 0.0084 0.68 10.9 0.4 1 23 1520 1543 1520 1543 0.95 23 23 0.00018 0.014 16.2 0.4 1 23 1551 1574 1551 1574 0.96
Sequence Information
- Coding Sequence
- atgagtGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATTGAAAATTAGGGATTGTGTGTCTATAGAGaTAAACGAAGATGACGACCTGCCAACGAATGTTTGCAGAAAATGCTGTGACAATGTGAATAACTGGCACATTTTTAAGGATGTATGTGAAAGGGCACAAAACAAACTTCAGACTCTCATTAAAAATGATGGCAGCCAACTAGAAGAGGTGCAAATTAAAAGTGAACCTCTTTCTGATGAGGCTTATGATGATGGAGTGGTTATTGAAGCATCATACCCTGACCTTGAGTGTGCATCTTCATCCAGTAAAGTTCAACCAGAAGGCCCTCCTATCTTGGCTTCGCTGGGTCTCACACCAAGGAGTGATAAGGGAATGGAGAGCGAAAATAATGAAGAAGAAGATGAAGACATGAATGATGATGAGTTGAACGAAACGGGGCAGCCATTTCCCAATGTACCCAGTATGCCGGAGGTCTCCATCACTGTCATGCGTCCTTCTGGTGAGACTTTGCAGTCACGTCAAGGAATACAACAACTAGCTTCTAAGGATTGCCTCGTGTGCAGTCGTTCCTATAGGTATTCTCATAATGCCAGACGTCACGAACTCAATGCTCATAATTTTGACAggtacacaaacaaaataagtgGCAAAAAATCACATAATCACCTTCCTAAACTTAGACCCAACCCATTCAATCCCAAAGCAAGGCTCATGCCAAATCCTATAAGTCATAAAATGCAGTTAATTCCTAAGGGAATTAATGCAAAAATCATTCagaataataaagttattgctCCACCAAAACCCATACCAATTAAAACACCAAAGGGCACTCAGAATAATTTACCATATCCGCTTCGTATTAAAGCGCTTAAAGATttacaaattaagaaaaaagaaCCGCAAATACTTAAAACCTTGTTGACAACAAAACCCGAAGTTTTGGTATCTGAACCGGAAATCCTTAATTCTGGCCCTGAAAGTCCAGAAACATTGATATCTGAGCCGGAAATAGCATCGTTCCAAGTAGAAACTATCCTCTCGGAACCAGATACTTATATTAATCAAGATGATGAAGATGTAGATGGTGATATGCAAAACAATCAAGGGCAAAATTATGACACTGTTGACATGGATTCTGATAATGAGATTGAAATTGCTCGCCAGCAAGAAGGTGCTGTTGAAGATGCCGATGACGGCGATGATCATCTCGTTAATAACGAAGGGGATGAAGGTATGGATCCATTAGATAATGACGATGAAAATCACATGGAAAGAAATCAAAGTGATAATGACAATGATCATGTTGATGATAATGGCGATAGTCAAGACGAGTTGCACATTGTCAACGATACAGGAGGTAGAGATGAAACCAAAGAAGGCGAAGAAGTTAATGACGAAAGAGATGATGAACAGCTGGAATACAATCACGATGATGATGACGACGATTTGCCTCCTATAGCTCCGGTCGTTGAAATTAATGAAGATCTGCAAAATTCTTACAGCAACGAAGTAAACGAAGAGGAGCTCGATGAAACAGCAGACCCTAATGACACGGCCGATCTTAAAGAACTTGATCCTGACAAGTTGTATGTAACCAAGACACAAAGAGATTTCATACACAAATATCGCGATGTTATTGAACAGATCAATACCAAAAGATGCCTTTGTTGCGATAGAGAACATCCACGTCGCAAAGCTGTCATACAACATTTACAGAAAAACGGACAAAAGGTTCCGAAACATACATGTTACAATTGCGTTGTTACGTTCGGTCATATAGGCGCTTTACTGAGTCATATGCGGTCCAATACCTGCACGGACCTATGGAAGATTATTTACAATGAAAATGGAATCACCGACGATTTAGTTTTGGAGGATGAACCCAAAGATACCAAAGTCcaatataaagatatttttaatgctAGGTCATATGCGTGCAAATTGTGTCCGGCGAAATTCCAATTGAAACAGTTTATTATGAAACATGTGTTAGACGTGCACGAGGATGGCCAGTCCCGTGTGCAGCTTGCGTGTGTACACTGTAGTTCCAGATTTAAAGATAAGGCGATGTGGAAGAAACACATCCGTAACGGGGAATGTACGGTTTACATTTCGTGTGATTTATGTTCCGAGAGATTCGGCAACATGCAACATTTCAATGACCACGCGTTAGCTGTACATGCGGGAAGCTTCGACCAGTCTGATAATCAGAACAAGTGTGTCGACGGACGGCCGACGGACTGTCCTATTTGCGGGAAGAAGAATAGCAGCTATCCAAATTTAGTTAAACATTTGAAGATTATACACAGCGAGGAGAAACCTCATTACTGCCAACATTGTGATTCTAAATTTGAACAAGCTGCTGACTTAAATAAACACATCTATATGGAACATTCTGATAGAACGTTGGGCATGCAGAGCCACGAGCCCGACATGTCACTCGTCAAAGAAGAAACCGAGGAATACCATTATTCCTGCACAGAATGTAATGCCATATTTGAGACCGTCGACGCTTGGACAGATCATCAGGTGGCTGAACACAATCAAGTTGCTCATCATTGTGATCAATGCGACAAGAAATTTTTAAGACCATCTGAACTCGCGGAGCACAAAAATACGCATTTAAGAGTTAAATTCTATCCTTGCAGTATTTGCTCTAATTCCTACAGCACTCCTCAAAAACTTTCCGAACACGTACAGCAAAATCACCCAGGAGCATCGGGAACATTTATGCCCGTAGACTATGATTTCTTCTGTGACATTTGTATTAGGTCATTCAAAAGCCGCCAGGCCTACTCAAACCATATGCGTATACACGCCAAAGTACCAACTACGAATAGAAAACCCGGCGATCCCAAGGGCTTCGCACCGCAAATTGTTGGGAAACCCATTAGATCGTTTTCGATGGTTCAACCTAGTTTTCTTTCATTCAAACCTAATTGTAATGTCCCCAATGCGCCTTATTCGTGTGACATCTGCGGTAAAGGTTTCATGCACAAGAAAAACATCTGGAAGCATAAAAAAGTTCTCCATGCCGATCATAGTGGTGATAGAATCGATAGTGAAGAGAATACAATGCAAGCTTCCACTGAAGAGGATGATTATAATTTAGACGAAAACGGGGCCATTCTGTCCACACCGCAGTTCAATAGTTTTAACTTCACTaacttaacaaataatttacaaCAACAGCCTCAAGACCCTACACCTTATTCTTGTGAATTATGTTTTAAACGGTTTCCACTTAGAACAAGCTTGTGGAAACATAAACGCGCCAAGCATGGCATCATTAACGCCAGTGCCAGCGGCCACTCTGACTCACCGGTAGGGGAAAGCGGTAGATCTAGTTGCACGATTTGTAAAATCACGTTTTCAGACAAGAAATCGTATTACCGTCATAGAAAAAATGTCCACAAGTCGTCGGCACAAATGTGCAAAATTTGCGGGAAACCTCTTAATTCTACATTGGAATTATACGAGCACCTTAAAGCCGCTCACGCTAGAGAACTACTGGGCTACAATGCGAGCCAAACTTCAACTAAACAGGAAGTTGTCCAAGAATTGGAAGTGGAGTATGAAGGCGACCAGGATTCAGTAGATCCTACTGCGGAATATCAAGCCCGATATCCGTGCGACACATGTGGCAAACAGTTCGTGGGTTTACTCGCGTTGCAAAACCATCAATGCATAAACCAACTACAGTCATCATCTCAAACGTTCGATTGCGAAATTTGCCACAAAAGCTACACATCTATATCCGCGTTAAAGAGTCACCGCGGCTGGCATTTGCGTTCCCCGGACGGGAAAGCGGCTGCTAACAATTCTGGCCTCTGGATGCCTCAGCATAAAGTTACCAGCAAAGTCAGCAAACACGAGGTCGTCGACCCTTCCCAACTCGCGCGGGTCACTCATTCAACACCTCTCAGCGTCGTCGCTAAGAGGAGACTGCCGCCGGAAGTGGAAGTGACTGTCGTCAATCCCAACAAGAAAATGCGTTCCGACGATTCCGTAGAACTAGAACAGCAGAACAATTCATCTACCGGACCTGACGACAGATATTGCAACATATGTGATAAGGAGTTCACTAAGCGAGCTGCTTATCAACGCCATATGGACGAAGTGCACCAACCCAATTCCGTATTCTGCCCAGTTTGTGATAAGAGTTTCACCCGTAAATCAACATTGATTGTGCATATGAAGAAACATTACGACTCTGGTGAGGGAAGTTCCACCGCCGCAGATCAGATGGACGACGATTGCATTCCATGCGACGTTTGCGGAGTGCAGTGTGATAACGAAAGCGCCCTAAGATCCCACCAAGCGATGCACCACGGTGACGATTCAGGCGAGTCTGAAGATGATGGGACCAGCGTGCCCCCTCCTGGCGAATTCACGTGCGGGCAGTGCGGTGATGGTGTTGCCACGCCTCGTGACTTGATCGCTCACCGTACTATGCACTCGACTCCAACAAAATTCTTTTGTAACATATGCAAAGTGTACTTTGCGAGGGCGATAGACCTGTCGTCCCATACACGAGCGAGACATGCTGACAATGAGAAAGTATTCTTTCCGTGTGCGATGTGCGATAGATTTTATATGAACAAAAAGAGTCTACAACGGCACATTGAGATGGCCCATTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLALKIRDCVSIEINEDDDLPTNVCRKCCDNVNNWHIFKDVCERAQNKLQTLIKNDGSQLEEVQIKSEPLSDEAYDDGVVIEASYPDLECASSSSKVQPEGPPILASLGLTPRSDKGMESENNEEEDEDMNDDELNETGQPFPNVPSMPEVSITVMRPSGETLQSRQGIQQLASKDCLVCSRSYRYSHNARRHELNAHNFDRYTNKISGKKSHNHLPKLRPNPFNPKARLMPNPISHKMQLIPKGINAKIIQNNKVIAPPKPIPIKTPKGTQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEILNSGPESPETLISEPEIASFQVETILSEPDTYINQDDEDVDGDMQNNQGQNYDTVDMDSDNEIEIARQQEGAVEDADDGDDHLVNNEGDEGMDPLDNDDENHMERNQSDNDNDHVDDNGDSQDELHIVNDTGGRDETKEGEEVNDERDDEQLEYNHDDDDDDLPPIAPVVEINEDLQNSYSNEVNEEELDETADPNDTADLKELDPDKLYVTKTQRDFIHKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGQKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVQLACVHCSSRFKDKAMWKKHIRNGECTVYISCDLCSERFGNMQHFNDHALAVHAGSFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQSHEPDMSLVKEETEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQNHPGASGTFMPVDYDFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIVGKPIRSFSMVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADHSGDRIDSEENTMQASTEEDDYNLDENGAILSTPQFNSFNFTNLTNNLQQQPQDPTPYSCELCFKRFPLRTSLWKHKRAKHGIINASASGHSDSPVGESGRSSCTICKITFSDKKSYYRHRKNVHKSSAQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQTSTKQEVVQELEVEYEGDQDSVDPTAEYQARYPCDTCGKQFVGLLALQNHQCINQLQSSSQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPLSVVAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNNSSTGPDDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDSGEGSSTAADQMDDDCIPCDVCGVQCDNESALRSHQAMHHGDDSGESEDDGTSVPPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01141080;
- 90% Identity
- -
- 80% Identity
- -