Oale013663.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ornithoptera alexandrae
Gene Symbol
lov
Assembly
GCA_029030555.1
Location
JARDVY010000064.1:4759182-4766913[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.8e-19 1.7e-15 57.0 0.0 1 44 121 164 121 165 0.96

Sequence Information

Coding Sequence
ATGGCGGGCACGCGCGCCGGCCTGACCATAGACAACACGCGGCGACTCCCACACGAGCTGAGCGCGGTACGGCACGACACGTCACGGCGCTCTCCCGCCCGCGCCGTGTGTGTCCGCATCCGTATCGCAAAGTGTGTTCATTCAAACCCCGCAGGCAGCCCCCACCCCGCGCCGCAACTGTTCGGCATCGACTCTCCTCTGGGCCTATTCCCGCCGGGTATGGAGCACAAGATGTATCCGCTGATGGACGTGGAGCACCGCGCGCCGCCGCTGGATGCTCAGCTCTTCACCAATGTCAAGAAGAAATGGCGACCGAAGGGACAGCATAGCGCCCCGCGCGGCGGCCCGCCCCGCTCCTGGACGAATGCAGAGCTGACGGAGGCGCTACAGCACGTATGGAACAAGAAAATGACAACCAGCCAGGCGTCGAGGATTTTCGGCATACCGTACAATTCGCTGCTGATGTACGTGCGCGGCAAGTACGGCAAGAGTCTGAAACTCGAGCAGCTGCGGAAGGACTGCATCGGCGGCCCGCTGGACGTGCTTAAcctcaacactggcaacaacaacaacaatcaCCCCTCGAAACACTACGACAAAGACGACCACCAGAACACCAGCCAAAGACCGGCAAGCTCGGAACCCGACATCGCCTCCAACCCTATGTTCAATCCGTTCCAACAGGGCTTCTACCCGGAATTCCCGCCCGGGTTTCCGATGCCTCTTAACATGCTGCATCTCCTACCGCCCAACGATAAAGCCCGCGATCTCTACCAGTCTATGCCGATGGCCCTGGACTCTTTGTCGGGCGCCACGAAGGAGGAGGACTGCAAGAGCGATAGATCGAAAGAGAATTCCGCGGACGAGGAGGGTGACTCCTACCGCGCACCAGCTCACCCTCCGCATCCGCCCGACAACCGCACGCTCTTACATCACAATGGTCAAGATTAA
Protein Sequence
MAGTRAGLTIDNTRRLPHELSAVRHDTSRRSPARAVCVRIRIAKCVHSNPAGSPHPAPQLFGIDSPLGLFPPGMEHKMYPLMDVEHRAPPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNTGNNNNNHPSKHYDKDDHQNTSQRPASSEPDIASNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPNDKARDLYQSMPMALDSLSGATKEEDCKSDRSKENSADEEGDSYRAPAHPPHPPDNRTLLHHNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00819074; iTF_01496482; iTF_01494242; iTF_01245859; iTF_00858468; iTF_00063502; iTF_01010286; iTF_01173205; iTF_01388388; iTF_00341253; iTF_00683237; iTF_00681583; iTF_00751943; iTF_01494983; iTF_00157128; iTF_00364838; iTF_00345741; iTF_00706861; iTF_00794265; iTF_01502010; iTF_00279049; iTF_01081514; iTF_01386637; iTF_01387535; iTF_01385624; iTF_01125390; iTF_00960859; iTF_00287980; iTF_01359638; iTF_00025183; iTF_00935600; iTF_00649029; iTF_01502896; iTF_01071563; iTF_00947820; iTF_01503769; iTF_00432049; iTF_00433063; iTF_00457169; iTF_00744529; iTF_01569233; iTF_00411348; iTF_00410211; iTF_00871220; iTF_00409205; iTF_00256769; iTF_01336751; iTF_00009923; iTF_00008820; iTF_01464087; iTF_00144484; iTF_01135685; iTF_00462315; iTF_00156177; iTF_01134712; iTF_00325306; iTF_00155230; iTF_01437893; iTF_00660232; iTF_00656013; iTF_00772800; iTF_00658281; iTF_00659383; iTF_00657066; iTF_01463179; iTF_01317197; iTF_01316232; iTF_00112435; iTF_00113245; iTF_00021262; iTF_00289550; iTF_00791119; iTF_01072367; iTF_00895824; iTF_00913527; iTF_00634237; iTF_01172255; iTF_00654163; iTF_00787540; iTF_00148408; iTF_00149301; iTF_00255736; iTF_00342137; iTF_00290587; iTF_00412443; iTF_00680444; iTF_00044382; iTF_00826751; iTF_00926517; iTF_00696407; iTF_00027681; iTF_00702818; iTF_00700931; iTF_00267110; iTF_00697254; iTF_00810919; iTF_00856519; iTF_00119529; iTF_00632681; iTF_00704875; iTF_00737389; iTF_00701871; iTF_01428975; iTF_00686257; iTF_00026770; iTF_00661202; iTF_00698194; iTF_00700018; iTF_00703858; iTF_01161237; iTF_00705911; iTF_00699099; iTF_01312155; iTF_01099772; iTF_00663006; iTF_01170494; iTF_00377023; iTF_00361536; iTF_01182592; iTF_01145217; iTF_01282149; iTF_01341061; iTF_01509509; iTF_00284454; iTF_01302215; iTF_00275176; iTF_01403362; iTF_01501026; iTF_00844248; iTF_00682282; iTF_00006220; iTF_00638574; iTF_00355012; iTF_01219706; iTF_00468112; iTF_01279184; iTF_00318033; iTF_00674225; iTF_01401201; iTF_00321522; iTF_00347410; iTF_01020147; iTF_01139541; iTF_00806614; iTF_00011865; iTF_00909657; iTF_00382492; iTF_00150400; iTF_00723895; iTF_01082359; iTF_00166851; iTF_00795621; iTF_00971154; iTF_01438820; iTF_00277286; iTF_00985912; iTF_00736538; iTF_00408316; iTF_00212352; iTF_00213347;
90% Identity
iTF_00074403; iTF_00143005; iTF_00825513; iTF_00926517; iTF_00826751; iTF_00077410; iTF_01415746; iTF_01416694; iTF_01402655; iTF_00355012; iTF_00673413; iTF_00795621; iTF_01082359; iTF_00433063; iTF_00432049; iTF_00640199; iTF_00751943; iTF_00279049; iTF_01157577; iTF_01156201; iTF_00177994; iTF_00150400; iTF_01317197; iTF_01316232; iTF_00112435; iTF_00621147; iTF_00113245; iTF_01181821; iTF_01154932; iTF_01125390; iTF_01336751; iTF_01403362; iTF_00275176; iTF_00844248; iTF_01501026; iTF_01251664; iTF_00318033; iTF_00026770; iTF_00027681; iTF_00931138; iTF_00677460; iTF_00736538; iTF_01361509; iTF_00783349; iTF_00187064; iTF_01264319; iTF_00780960; iTF_00781759; iTF_00321522; iTF_00072660; iTF_00806614; iTF_01359638; iTF_00287980; iTF_01333655; iTF_00011865; iTF_00909657; iTF_01509509; iTF_00119529; iTF_00661202; iTF_01529118; iTF_00377023; iTF_00361536; iTF_00007003; iTF_00195101;
80% Identity
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