Bbre004683.1
Basic Information
- Insect
- Baronia brevicornis
- Gene Symbol
- lov
- Assembly
- GCA_031353405.1
- Location
- JASFAT010001003.1:45546-56317[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-19 1.1e-15 57.2 0.0 1 44 97 140 97 141 0.96 2 2 1.8 3.3e+03 -2.0 0.0 17 25 184 192 181 197 0.77
Sequence Information
- Coding Sequence
- ATGATTATACCGACATTGCTCGGCAGCCAcagcctcgtctgttatctagcagggaacATCCGGTACCTAccgccgccgaagcgcgtgcagTGTTTCTCCTCGCCAGTGTTTGGAATCGACTCACCGTTGGGCCTGTTCCCGCCCGGGATGGAACACAAGATGTACCCGCTAATGGACGTCGAACACCGCGCGCCGCCCTTGGACGCGCAACTCTTCACGAACGTCAAAAAGAAATGGCGACCGAAAGGCCAACACAGCGCGCCACGTGGCGGCCCACCCAGGTCCTGGACGAACGCCGAATTGACAGAGGCTCTACAACACGTATGGAACAAAAAGATGACTACAAGCCAAGCATCAAGAATATTTGGAATACCCTACAACTCCCTGCTTATGTATGTGCGTGGTAAATACGGGAAGAGCCTGAAACTGGAACAACTCAGAAAAGACTGCATCGGCGGCCCATTGGACATGTTGAATTTGAGTTCTggtaacaacaacaacaaccatCCTCCAAACAAGCACCACGACAAGGACGATCACCAACAAAATATGAGCCAAAGACCTGCCAGCTCGGAGCCAGATATCGCATCGAATCCAATGTTCAATCCATTCCAACAGGGCTTCTATCCAGAATTCCCACCCGGGTTCCCAATGCCACTGAACATGCTTCACTTACTTCCGCCGAATGAGAAAGCGAGGGAACTATATCAGTCGATGCCGATGGCTCTGGATTCATTATCAGGCGTTACAAAAGAGGAGGATTGTAAAAGCGACCGGTCAAAAGAGAATTCAGCAGACGAGGAAGGTGACTCCTACCGAGCGCCCTCGCATCCTCCGCACCCGCCCGACAATCGTACGCTTCTACATCACAACGGGCAAGACTAA
- Protein Sequence
- MIIPTLLGSHSLVCYLAGNIRYLPPPKRVQCFSSPVFGIDSPLGLFPPGMEHKMYPLMDVEHRAPPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDMLNLSSGNNNNNHPPNKHHDKDDHQQNMSQRPASSEPDIASNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPNEKARELYQSMPMALDSLSGVTKEEDCKSDRSKENSADEEGDSYRAPSHPPHPPDNRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00855805;
- 90% Identity
- iTF_01115635;
- 80% Identity
- -