Gpyr014930.1
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- lov
- Assembly
- GCA_947859175.1
- Location
- OX401866.1:7342740-7350303[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-18 9.7e-16 57.4 0.0 1 44 66 109 66 110 0.96
Sequence Information
- Coding Sequence
- ATGTCTAAAGGAGTGTTCGGGCTCGATTCGCCCCTGGGACTGTTCCCACCGGGCATGGAGCACAAGATGTACCCACTGATGGACGTGGACCACCGCGGCCCGCCATTAGACTCACAACTATTCACTAGTGTCAAAAAGAAATGGCGACCGAAAGGGCAACACAGCGCGCCGCGCGGTGGCCCACCTCGATCCTGGACAAATGCAGAACTAACGGAAGCTCTCCAACACGTGTGGAACAAGAAAATGACGACAAGCCAAGCCTCAAGAATCTTCGGCATCCCTTACAACTCTCTACTGATGTACGTTCGCGGCAAGTACGGTAAAAGCCTCAAGCTGGAGCAGCTGAGGAAGGACTGCATCGGCGGCCCGCTCGACGTACTGAACCTCAACTCCGGAAACAACAACAACAACCACCCCAGCAAGCACCAACACGACAAGGAAGACCACCACAACGCAAGCCAAAGACCGTCGAGCTCCGAGCCGGACATCACGTCGAACCCGATGTTCAATCCGTTCCAACAAGGGTTCTATCCGGAGTTTCCGCCCGGTTTTCCGATGCCGCTGAACATGCTGCACCTGCTACCGCCGAGTGACAAAGCGAGGGAGCTGTACCAGTCGATGCCGATGGCTCTAGACTCGCTGTCGGGGGTTACCAAGGAGGAGGACTGCAAGAGCGACCGTTCCAACGAGAAGTCTGCGGACGAGGAAGGCGACTCGTACCGCACGCCCTCGCACCCGACGCACACGCCCGACAACCGCCAGCTGCTACACCACAACGGACAGGACTAA
- Protein Sequence
- MSKGVFGLDSPLGLFPPGMEHKMYPLMDVDHRGPPLDSQLFTSVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNHPSKHQHDKEDHHNASQRPSSSEPDITSNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPSDKARELYQSMPMALDSLSGVTKEEDCKSDRSNEKSADEEGDSYRTPSHPTHTPDNRQLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115635;
- 90% Identity
- iTF_00994288;
- 80% Identity
- -