Ppra035625.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudoips prasinana
Gene Symbol
lov
Assembly
GCA_951640165.1
Location
OX621250.1:10070467-10073029[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-17 3.3e-15 57.5 0.0 1 44 58 101 58 102 0.96

Sequence Information

Coding Sequence
ATGGACTCCCCTTTGGGCCTGTTTCCGCCAGGCATGGACCATAAGATGTACCCCCTTATGGACGTCGAACATCGAGCGCCGTTAGACGCGCAACTATTCACGaatgttaaaaagaaatGGAGGCCGAAGGGGCAGCACAGCGCGCCGCGCGGCGGGCCGCCTCGCTCGTGGACCAACGCGGAGCTGACAGAGGCGCTGCAGCACGTGTGGAACAAGAAGATGACCACGAGCCAGGCGTCGCGCATCTTCGGCATCCCCTACAACTCGCTGCTCATGTACGTGCGCGGCAAGTACGGCAAGAGCCTCAAGCTGGAGCAGCTGAGGAAAGACTGCATCGGCGGGCCGCTCGACGTGCTCAACCTCAACTCCGGCAACAATAACAACAACCAACCTCACAGCAAACACCACGATAAGGACGAGCACGGCTCGCAACGACCAGCGAGCTCAGAGCCCGACATCGCCTCGAACCCCATGTTTAACCCGTTCCCGCAAGGCTTCTACCCGGAGTTTCCACCCGGGTTCCCGATGCCTCTCAACATGCTTCATCTCTTACCACCCAACGAGAAAGCGCGGGAGCTGTATCAGTCGATGCCGATGGCTCTGGACTCGCTTTCGGGAGTAACGAAAGAGGAGGATTGTAAGAGTGACCGATCGAAGGAGAACTCTGCCGATGAGGAGGGCGAGTCGTACCGCGCGCCCGCGCACCCGCCGCACCCGCCCGACACGCGCACGCTGCTGCACCACAATGGACAGGACTAG
Protein Sequence
MDSPLGLFPPGMDHKMYPLMDVEHRAPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNQPHSKHHDKDEHGSQRPASSEPDIASNPMFNPFPQGFYPEFPPGFPMPLNMLHLLPPNEKARELYQSMPMALDSLSGVTKEEDCKSDRSKENSADEEGESYRAPAHPPHPPDTRTLLHHNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01220581; iTF_01075298; iTF_01335848; iTF_00001101; iTF_00186061; iTF_00185233; iTF_00677460; iTF_01152951; iTF_00824632; iTF_00281053; iTF_01148030; iTF_00327008; iTF_01076312; iTF_00197298; iTF_00931138; iTF_00932330; iTF_00302021; iTF_00037697; iTF_00951713; iTF_00952610; iTF_00124163; iTF_01085059; iTF_01093955; iTF_00041700; iTF_00301092; iTF_00622724; iTF_00685348; iTF_00809028; iTF_01094820; iTF_00711749; iTF_00924517; iTF_01361509; iTF_01439814; iTF_00726215; iTF_00928583; iTF_01062727; iTF_01339943; iTF_00040712; iTF_01063688; iTF_00121321; iTF_00122281; iTF_00177033; iTF_00363945; iTF_00445033; iTF_00851689; iTF_01030121; iTF_01338505; iTF_00123274; iTF_00172650; iTF_00237386; iTF_00758058; iTF_00071307; iTF_00373835; iTF_00448939; iTF_00745547; iTF_00446028; iTF_01084172; iTF_01064557; iTF_01061806; iTF_00850543; iTF_01031055; iTF_01531887; iTF_00043408; iTF_01230448; iTF_00147217; iTF_00425297; iTF_01532945; iTF_00042546; iTF_00906034; iTF_00973682; iTF_01029139; iTF_00831092; iTF_01027220; iTF_00771797; iTF_00120406; iTF_01533846; iTF_00907799; iTF_00888152; iTF_01246744; iTF_00375097; iTF_01028185; iTF_00906971; iTF_01526939; iTF_00273532; iTF_01534716; iTF_00038621; iTF_00039710; iTF_00274366; iTF_00300094; iTF_00809982; iTF_00036543; iTF_00667263; iTF_01525855; iTF_00171680; iTF_00447040; iTF_01025952; iTF_01092992; iTF_01192544; iTF_00832833; iTF_00778691; iTF_00782564; iTF_01119237; iTF_01117112; iTF_00111545; iTF_01440909; iTF_00647918; iTF_01118190; iTF_00775952; iTF_01561053; iTF_00775187; iTF_00695397; iTF_00146311; iTF_00720141; iTF_00869546; iTF_01435981; iTF_00967955; iTF_00007936; iTF_01547445; iTF_00034613; iTF_00035569;
90% Identity
iTF_01115635;
80% Identity
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