Amor023607.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- lov
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000017.1:8613554-8621491[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-17 1.4e-14 54.9 0.0 2 44 72 114 71 115 0.94
Sequence Information
- Coding Sequence
- ATGTCACACTCAAAGATCGAAACGCTCATGTTCGGCCTGGACTCGCCGCTTGGCCTGTTTCCACCCGGCATGGACCACAAAATGTACCCCATGATGGACGTGGAACATCGGGGGCCTCCTCTCGACGCACAACTCTTCACTAATGTCAAAAAGAAATGGCGACCGAAGGGCCAACATAGTGCACCACGGGGTGGTCCGCCGCGATCGTGGACGAACTCCGAACTCACCGAAGCTTTACAACACGTCTGGAACAAAAAAATGACAACCAGCCAAGCATCAAGGGTATTTGGTATACCATACAACTCTTTACTCATGTACGTACGGGGCAAATACGGTAAGAGTCTAAAGCTAGAACAGCTGAGGAAAGATTGCATCGGTGGGCCCTTGGAGGTGCTAAATTTAAATTCCGGTAATAACAACAATAATCATCCTTCAAGCAAACATCACGATAAAGAAGACCAACACCAAAATGCGAGTCAGAGGCCCTCAAGTTCAGAGCCGGACATCTCTTCAAATCCTATGTTTAATCCATTCCAACAAGGTTTCTATCCAGAATTCCCTCCTGGATTCCCAATGCCATTAAATATGTTGCATTTGTTACCACCGAGTGAGAAGGCAAGGGAATTATATCAATCAATGCCGATGGCTTTAGATTCATTATCAGCGATGACAAAAGAAGAAGATTGCAAAAGTGATAGGTCAAAAGAGAATTCGGCAGATGAAGAAGGGGACACATATCGCGCCCCGGCGTTACCACCCCATCCGACAGACAATCGCACTCTACTACACCATAACGGTCAGGATTAA
- Protein Sequence
- MSHSKIETLMFGLDSPLGLFPPGMDHKMYPMMDVEHRGPPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRVFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLEVLNLNSGNNNNNHPSSKHHDKEDQHQNASQRPSSSEPDISSNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPSEKARELYQSMPMALDSLSAMTKEEDCKSDRSKENSADEEGDTYRAPALPPHPTDNRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115635;
- 90% Identity
- iTF_01017664;
- 80% Identity
- -