Pchl019727.1
Basic Information
- Insect
- Petrophora chlorosata
- Gene Symbol
- lov
- Assembly
- GCA_951640565.1
- Location
- OX621206.1:4482837-4485580[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-18 1.4e-15 57.5 0.0 1 44 59 102 59 103 0.96
Sequence Information
- Coding Sequence
- ATGGACTCCCCCCTGGGGCTGTTCCCCCCCGGCATGGAGCACAAGATGTACCCGCTGATGGACGTGGAACACCGCGCGCCGCCGCTCGACTCACAACTCTTTACGAACGTTAAAAAGAAATGGCGACCGAAAGGCCAGCACAGCGCGCCGCGCGGTGGTCCACCTCGATCGTGGACCAACGCGGAGCTAACGGAGGCTCTGCAGCACGTGTGGAACAAGAAAATGACGACGAGCCAAGCCTCGAGGATCTTCGGCATCCCTTACAACTCGCTGCTCATGTACGTGCGCGGCAAGTACGGGAAGAGCCTCAAATTGGAACAGCTGAGGAAAGACTGCATCGGGGGCCCGCTCGATGTGCTCAACTTAAATTCGgggaacaacaacaacaaccacCCTTCGAAGCACGTGAAGGAGGAGCATCAGAACCAGGGCCAGCGGCCGGCGAGCTCAGAACCGGACATAGCATCGAGCCCGATGTTCAACCCGTTCCAGCAAGGGTTCTACCCGGAGTTCCCGCCGGGTTTCCCGATGCCGCTGAACATGCTTCACCTGCTGCCGCCGAACGACAAAGCCCGGGAGCTGTACCAGTCGATGCCGATGGCGCTCGACTCGCTGTCGGGCGTCAGCAAGGAGGAGGATTGTAAGAGCGACCGGTCCAAGGAGAACTCTGCGGACGAGGAAGGAGATTCGTACCGCGCGCCGCACCCGCCGCACCCGCCCGACAGCCGCCAGCTCCTGCACCACAACGGACAAGATTAG
- Protein Sequence
- MDSPLGLFPPGMEHKMYPLMDVEHRAPPLDSQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNHPSKHVKEEHQNQGQRPASSEPDIASSPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPNDKARELYQSMPMALDSLSGVSKEEDCKSDRSKENSADEEGDSYRAPHPPHPPDSRQLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115635;
- 90% Identity
- iTF_00390305; iTF_00206921; iTF_01208035; iTF_01209129; iTF_00649029; iTF_01437893; iTF_00818281; iTF_00033742; iTF_00032828; iTF_00205980; iTF_00125070; iTF_00935600; iTF_00055318; iTF_00649938; iTF_00323415; iTF_00913527; iTF_01367613; iTF_00044382; iTF_00895824; iTF_00634237; iTF_00666431;
- 80% Identity
- -