Hvit007690.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- lov
- Assembly
- GCA_951804965.1
- Location
- OX638091.1:4579303-4585084[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-18 1.7e-15 57.3 0.0 1 44 85 128 85 129 0.96
Sequence Information
- Coding Sequence
- ATGATAAAGCAGCATTATAATGATAACCTAGATAATAGATTAACACTAAACTTAGAATCCGAAATGGTGGTGTTCGGACTGGACTCGCCCCTAGGCTTGTTCCCCCCGGGCATGGAGCACAAGATGTACCCCCTGATGGACGTGGAACACCGCGGGCCGCCGCTAGACTCACAATTATTCACTAGTGTCAAAAAGAAATGGCGACCGAAAGGGCAACACAGCGCGCCGCGCGGTGGCCCACCTCGATCCTGGACAAACGCAGAACTGACGGAAGCTCTCCAGCATGTGTGGAACAAGAAAATGACGACAAGCCAAGCCTCAAGGATCTTCGGCATCCCTTACAACTCTCTTCTAATGTATGTGCGCGGGAAGTACGGCAAGAGCCTCAAACTCGAACAACTGAGGAAAGACTGCATCGGCGGACCGTTAGACGTACTCAATCTGAACTCtggcaacaacaacaacaaccatcCGAGCAAGCATCAACACGACAAGGAAGATCATCACAACGTAAACCAAAGACCAGCGAGCTCCGAACCGGATATCACATCCAACCCGATGTTCAATCCTTTCCAGCAGGGTTTCTACCCGGAGTTCCCGCCTGGTTTCCCGATGCCGCTCAACATGTTGCACCTCCTGCCGCCGAGTGATAAAGCTAGAGAGCTGTACCAATCTATGCCGATGGCTCTTGACGCGCTGTCAGGGGTGGTGACTAAAGAGGAGGATTGCAAGAGCGACAGGTCGAACGAGAAATCCGCCGACGAGGAGGGAGAGTCGTACCGCGCGCCGTCACACGGCCCACATCCCCCCGACAACCGCCAGCTCTTACATCACAATGGACAGGACTAA
- Protein Sequence
- MIKQHYNDNLDNRLTLNLESEMVVFGLDSPLGLFPPGMEHKMYPLMDVEHRGPPLDSQLFTSVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNHPSKHQHDKEDHHNVNQRPASSEPDITSNPMFNPFQQGFYPEFPPGFPMPLNMLHLLPPSDKARELYQSMPMALDALSGVVTKEEDCKSDRSNEKSADEEGESYRAPSHGPHPPDNRQLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115635;
- 90% Identity
- iTF_00994288;
- 80% Identity
- -