Flac011815.1
Basic Information
- Insect
- Falcaria lacertinaria
- Gene Symbol
- lov
- Assembly
- GCA_951449985.1
- Location
- OX602123.1:7194888-7203366[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-19 1.3e-15 57.2 0.0 1 44 104 147 104 148 0.96
Sequence Information
- Coding Sequence
- ATGAATGGGGTGAACTTTGACAAGTTGTGTACACATGGCCGCCGAAGGGTTGAGCCGAGTTGCGAACTAACTTCCGAGCGCTTTCGATTTCAACGCGTGTTGCATATGGGTCGAACGGGCATCGATCTGTTCGGCCTGGACTCCCCTCTGGGGCTGTTCCCGCCAGGCATGGAGCACAAGATGTACCCGCTGATGGACGTGGAACACCGCGCGCCGCCGCTCGACGCTCAACTCTTCACCAATGTCAAAAAGAAATGGCGACCGAAGGGCCAGCACAGCGCGCCGCGCGGCGGTCCACCTCGATCTTGGACCAATGCCGAGCTAACGGAGGCGCTGCAACACGTGTGGAACAAGAAAATGACAACAAGCCAAGCTTCGAGAATCTTCGGTATCCCATACAACTCGTTACTGATGTATGTACGCGGCAAGTATGGCAAGAGCCTAAAACTGGAACAGCTCAGGAAAGATTGTATCGGCGGACCACTGGATGTATTGAATCTTAATTCtggcaataacaataacaaccACCCATCAGTGAAACACCACGACAAGGACGACCACGGCGGGGGGCAGCGGCCGGCGAGCTCGGAGCCCGACATATCCTCGAACCCGATGTTCAATCCGTTCTCACAGGGCTTCTATCCAGAGTTCCCGCCTGGCTTCCCGATGCCTCTTAACATGCTGCACTTGTTACCACCGAGCGAGAAGGCGCGCGAGCTCTACCAGTCGATGCCGATGGCGCTGGACTCGCTGTCGGGCGCCAAAGAGGAGGACTGCAAGAGCGACCGCTCCAAGGAGAACTCCGCGGATGAGGAGGGCGATGCCTACCGCACGCCCCACCCCCCGCACCCGCCCGACACGCGCACCCTGCTCCACCATAACGGACAGGACTAA
- Protein Sequence
- MNGVNFDKLCTHGRRRVEPSCELTSERFRFQRVLHMGRTGIDLFGLDSPLGLFPPGMEHKMYPLMDVEHRAPPLDAQLFTNVKKKWRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPLDVLNLNSGNNNNNHPSVKHHDKDDHGGGQRPASSEPDISSNPMFNPFSQGFYPEFPPGFPMPLNMLHLLPPSEKARELYQSMPMALDSLSGAKEEDCKSDRSKENSADEEGDAYRTPHPPHPPDTRTLLHHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115635;
- 90% Identity
- iTF_01438820; iTF_00250385; iTF_00277286; iTF_01081514; iTF_00284454; iTF_00076391; iTF_01079818; iTF_01071563; iTF_00006220; iTF_01280109; iTF_00347410; iTF_00960859; iTF_00382492; iTF_00408316; iTF_00832833; iTF_01282149; iTF_01335848; iTF_01279184; iTF_00007936; iTF_00468112; iTF_00236564; iTF_01538657; iTF_00785127; iTF_01424967; iTF_00637417; iTF_00889101; iTF_00647918; iTF_00017263; iTF_01377391; iTF_01490064; iTF_00425297; iTF_00237386; iTF_00018098; iTF_01029139; iTF_01063688; iTF_01173205; iTF_01528205; iTF_00383545; iTF_01028185; iTF_00745547; iTF_00049823; iTF_01083227;
- 80% Identity
- -