Mror007566.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanophora roralis
Gene Symbol
sip1
Assembly
GCA_963583895.1
Location
OY757188.1:8372621-8375490[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-95 4.3e-91 306.4 14.7 1 275 422 692 422 692 0.99
2 2 0.61 1.1e+04 -3.3 0.0 245 265 707 727 704 735 0.68

Sequence Information

Coding Sequence
atgtctgATAATGAATATGAACGTTTTGAAATTACCGACTATGATTTGGATAACGAATTTAACCCGAATAGGATAAGgaagaagcaaacaaaacatCATCAAATTTACGgaatttggGCTGATGATAGCGACAATGATGATGAAGAGTCTTCTAGCAGGCGGCGTGGTGGTCGAAAAGGGCGCATGGGCTTGGGATCCTCCGGCAGCCGCAGTAATGATTACACCGCCCCCGTAAGCTTTGTGGCCGGTGGCATACAGCAGTCGGgaaaaaagaaagataaaaagggcGGAGATGATGTAACACAAGGAAGCGACGAAGAGAATCCCATAACagatgaagaagaagaagaatcaAACACCCGCCCTGGTTTTGGTATTGGTGCTAAGAATACTCTTATGGATGCAGAATCGCCTCAAACAAGCGATAATTCGGATGAAGATAATTATTCTAAAACAGCGCGAAAACCCCAACCAAAACCTTCATATTTTAAACCTAATCAAGCAGGTAATTCCAAAGTGGGAGCCTGGGAACAGCACACCCGCGGTATAGGAGCCAAATTATTGTTACAAATGGGTTACAAGCCTGGTATGGGCTTGGGTAAAGACCTACAAGGTATTTCACAACCAGTAGAGGCACACGTACGTAAGGGTAGAGGTGCTATTGGTGCGTATGGTCCAGAAACGGCTGCTAGTGTGGGTGGAAAGGgaCATAAGCCCCAAATAGATGAAGATGTTATTGAGGCTAAGGagtttaaagaaaagttaaacAAGTGGAAGAAGGCAGGAGATGCAAAACAGGACAAAAGCACTAAACGTTATTATTACCGATCGGTGGAGGAAGTTTTGGAAAAAGGCAAAAACTCCAATTATATTATAAGCGACAAAATAAGcaaaaaacttgGCAATGTTCCCGTTATCGACATGACAGGCCCAGAAAAACGTGTGTTTAGTGGTTATCATGCAATTGGCCAGTCTAAAGTAATAGAAGAAGATTTGTACGATCTTGAGCAACAGAAAAAATCAACTACAGCCTTTGCTTTACCCGAACTGATGCATAATCTTACGCTTATAGTTAATATGTGTGAACAGGATATTATATCTTTGGACTCGGCTCAAAACACAGCCATCGAGCGGCAGCAGTCTCTTGAGCAGGAAAAGAAACAACTTGAAGAGATTGTCAAGCTAGAAAGCAATCACATTAATACATTGGATAAAGTCTTGTTGTTAGTGGATGAATTGACCAGTAATGAATCTGAGTTGAATTTAGATCGAGCtgaaaaaatattcctagaactgCAGCAAGACTACACAGCTGAGTATAAACAATTTGGTTTGGGCGATTTGGCTGCCGGAATTATTGCTCCCCTGCTGAGGAATCATCTTAAGGATTGGATACCTTTGGAAAATCCTACGATGTATGTGGATCTAATAAAGAAATGGCGCACCATTTTAGAATGTAATAATGATACACAAACCGAAATACGTTCCAATATATTCGATCCGTATTCTTCTCTTGTTTGGGCTGGTGTTATACCCAGTTTTCGTTCTTGTGCTGAATTTTGGGATCCAAAACATTATCAGTCTATGGCTGCTTTACTGGACTGTTGGGCTCCTATGTTTCCCACTTGGATTTTAGATTCGGTCTTGGAACAACTTATATTACCGCGTTTAAGTACAGCAGTACGCAATTGGGATCCTCTTACGGATACTGTGCCTATACACATATGGATTTTACCGTGGAATACTATATTGGGCCATAAAATGGAAGAATTTATATTTcctactataagagaaaaattaggcAGTGCTTTGCAAGCTTGGATGCCTCAAGATCGTTCAGCCAGAGCAATGTTAACACCCTGGAAGGGTGCATTTGATGATAGTGAAATGCAAGTTTTCTTAATGCAGCATATCATACCCAAATTACAAATGGTTTTGGCAGAATTTATTATAAATCCGCTGCAGCAAGATTTAgAACCCTGGAATCAAGTCTGGGAATGGCAGGAACTTATACCCTCTATGCAAATGGCGCAACTTTTGGATAAACATTTCTTTCCCAAATGGATGCAAGTACTTGTTATGTGGCTAAATCAGTCACCGGACTATGGGGAAATATCCCGCTGGTATACCGGCTGGAAAAGTATGTTCTCCGAAGAGATCCTTAGAGAACCCAGTGTTAAGGAACATTTGCGTAGGGCTTTAGAAATTATGCATCGTGCCACTGATCAGATAGCATCAACAGTACCATTGGCAGGTGCCGCTACTATGGGGCCGACTATAACAGCAACACCTGTACCACCGCCACCTCAGCCACCGCCACCTCCCTCTCTAATGGATCTACAAGTACCAGCCCCCGCTCAATTAGAATTCAAAGAGTTGGTTTCTCGTAAATGTGCTGAAAGAGGTGTCTTGTTTGCTCCTATTCCCGGACGACGAGAGCTGGGCAAACAAATCTTTCGCGTGGGAAAACTATACTGTTACATTGATCGTAATGTTTGTATGTTAAGTGATGGTACTTTTAAGAACTGGATACCCACACCGTTGCAGCCAATGATCGAGCGAGCTATAACGGGCATTTTAAATTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNPNRIRKKQTKHHQIYGIWADDSDNDDEESSSRRRGGRKGRMGLGSSGSRSNDYTAPVSFVAGGIQQSGKKKDKKGGDDVTQGSDEENPITDEEEEESNTRPGFGIGAKNTLMDAESPQTSDNSDEDNYSKTARKPQPKPSYFKPNQAGNSKVGAWEQHTRGIGAKLLLQMGYKPGMGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVGGKGHKPQIDEDVIEAKEFKEKLNKWKKAGDAKQDKSTKRYYYRSVEEVLEKGKNSNYIISDKISKKLGNVPVIDMTGPEKRVFSGYHAIGQSKVIEEDLYDLEQQKKSTTAFALPELMHNLTLIVNMCEQDIISLDSAQNTAIERQQSLEQEKKQLEEIVKLESNHINTLDKVLLLVDELTSNESELNLDRAEKIFLELQQDYTAEYKQFGLGDLAAGIIAPLLRNHLKDWIPLENPTMYVDLIKKWRTILECNNDTQTEIRSNIFDPYSSLVWAGVIPSFRSCAEFWDPKHYQSMAALLDCWAPMFPTWILDSVLEQLILPRLSTAVRNWDPLTDTVPIHIWILPWNTILGHKMEEFIFPTIREKLGSALQAWMPQDRSARAMLTPWKGAFDDSEMQVFLMQHIIPKLQMVLAEFIINPLQQDLEPWNQVWEWQELIPSMQMAQLLDKHFFPKWMQVLVMWLNQSPDYGEISRWYTGWKSMFSEEILREPSVKEHLRRALEIMHRATDQIASTVPLAGAATMGPTITATPVPPPPQPPPPPSLMDLQVPAPAQLEFKELVSRKCAERGVLFAPIPGRRELGKQIFRVGKLYCYIDRNVCMLSDGTFKNWIPTPLQPMIERAITGILN