Sbel016571.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sturmia bella
Gene Symbol
sip1
Assembly
GCA_963662145.1
Location
OY759171.1:55526187-55529280[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-96 2.8e-92 309.6 13.7 1 275 422 692 422 692 0.99
2 2 0.24 2.9e+03 -2.0 0.0 245 265 707 727 697 741 0.50

Sequence Information

Coding Sequence
atgtcTGATAATGAATATGAACGTTTCGAAATAACCGATTATGATCTGGATAATGAATTCAACCCAAATAGGGCAAGGAAAAAGCAAACTAAACATCAACAAATTTatggaattTGGGCCGATGACAGTGACAACGAGGATGAGGAAGGATCTTCCGGACGTAGACGTGCTGGCAGAAAAGGACGCATGGGATTGGGCTCGTCGGGTGGCCGGAGTAAAGACTACACTGCTCCAGTAAGTTTTGTAGCCGGTGGCATACAACAGTCTGGCAAGCAGAAAGATAAAAAGGAGGAAGAAGACGATGAGGATGAAGATGAAGAAAATCCCATCACAGATGAAGAGGAAGAAATGAATATTCGTCCTGGCTTTGGCACGGGGAAGAAACCAACTTTAATGGATGTAGACTCTGCAGACACTAGTGATGAGTCGGACGACGAACGTATTACGAAGCAAACACAACAAATGCCACAAAAGCCCTCATATTTTAGGCATAATCAAGCAGGCGGTTCCCATGTAGGTGCTTGGGAGCAGCACACTCGGGGTATAGGAGCCAAATTGCTGTTACAGATGGGTTATAAACCAGGCAAAGGTTTGGGCAAGGATTTACAGGGTATATCGCAACCCGTAGAAGCTCACGTACGCAAGGGCCGGGGCGCTATAGGTGCTTACGGCCCGGAGACTGCTGCCAGTGTGGCAGGTGAAGCACCTAAACCCCAAGTCGATGAGGATGTACGTGAAGCCAAAGAATTTAGAGAAAAGTTGAATAAGTGGAAAAAAGCAGGAGATACCAAACAGGATAAGACCGCAAAACGTTATTATTATAGAAGCGTAGAAGAAGTCTTGGAGAAGGGAAAAAATGCCAATTATATTGTAACTGATAAAATGAGCAAAAAGCTGGGTAATGTACCCGTTATCGATATGACTGGACCGGAGAAGCGTGTATTAAGTGGCTATCATGCTATAGGTCAGTCCAAGATAAACGACGAAGATCTTTACGACCTTAATGAGCCCACTAAAAAATCCACTACAGTGTTTGCTCTACCCGAACTAATGCACAATTTAAATCTCATAGTTAATATGTGTGAACAAGACATCATAGCGCTGGACTCGGCTCAAAATTTTGCCAGTGAAAGGCAGACAAGTCTCGAACAGGAGAAGCAACAACTAGAGGAAATTGTTAAATTAGAAAGTGATCACATTAATACTTTGGATAAGGTTCTCTTACTGGTTGACGAGTTAACCAGCAATGAGAGCGACATAAATTTGGACAGAGCTGAGAAAATATTTCTGGATTTGCAGCATAACTACATGGCCGAATATAAACAATTTGGTTTGGGAGACTTGGCGGCTGGTATTATAGCGCCACTTTTGAAAAATCATCTATGTGATTGGAAGCCATTGGAAAACCCCACCATGTATGTGGAATTGATTAAAAAATGGCGTTCAATATTGGAGAGTCAAAATGAGTTGTCAGCCGAGACACGTGGCAATGTGTTTGATCCTTACTCTTCATTAATTTGGGCTGGCTTAATACCCAGTTTTCGATCTTGTGCTGAATTTTGGGACCCCAAACATCATCAGTCCATGGCCGCTCTTTTGGACTGTTGGGCTCCTCTGTTTCCCACTTGGATTTTAGATTCTGTGCTAGAACAGTTGATATTGCCACGCTTGAGCAAGGCTGTGCGCAGTTGGGATCCTTTAACTGACACTGTGCCCATACACATTTGGATATTACCTTGGAACTCTATATTGGGTCATAAAATGGAGGAATTCATATTCCCCACTATACGGGAGAAACTAGGCAATGCTTTGCAGGCTTGGATGCCACAAGATCGTTCCGCGCGTGCCATGTTAACGCCTTGGAAGGGGGCTTTCGATGACAGTGAGATGCAAGTTTTCCTCTTGCAGCATATCATACCGAAGCTACAAATGGTTTTGACGGAATTCATTATCAATCCTCTGCAACAAGATCTGGAACCCTGGAATCAAGTCTGGGATTGGCATGAACTTATACCCCCCATACAAATGGCTCAACTACTGGATAAATATTTCTTTCCCAAATGGATGCAAGTACTTGTTTTGTGGCTCAATCAATCACCAGACTATAGTGAAATTTCGCGCTGGTATTCCGCCTGGAAAAGTATGCTAACCGAGGAAGTTCTAAGAGAGCCAAGCGTGAAAGAACATTTGCGTAGAGCCCTAGAAATCATGCACCGGGCAACCGATCAAACAGCTTCAGCAATGCCGGTTGGCTCTAATATCAATGCAACGCCAGTACCACCACCGCCTCAGCCGCCACCACCTCTTCCCACGCTCTTAGACCTACAGGTGTCCGATCCCGTACAATTAGACTTCAAAGAATTGGTTTCGCGTAAATGCTCGGAGAGAGGTGTCCTATTTGCACCTCTACCAGGGCGTCGTGAATTGGGCAAACAAATTTATCGTGTTGGCAAGCTTTACTGTTATATAGATCGTAACGTGTGTATGCTCAGCGATGGCACATTTAAGAACTGGCTGCCCACACCGTTACAGCCCATGATAGAGAGAGCTATTACTGGTGTTTTAAATTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNPNRARKKQTKHQQIYGIWADDSDNEDEEGSSGRRRAGRKGRMGLGSSGGRSKDYTAPVSFVAGGIQQSGKQKDKKEEEDDEDEDEENPITDEEEEMNIRPGFGTGKKPTLMDVDSADTSDESDDERITKQTQQMPQKPSYFRHNQAGGSHVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVAGEAPKPQVDEDVREAKEFREKLNKWKKAGDTKQDKTAKRYYYRSVEEVLEKGKNANYIVTDKMSKKLGNVPVIDMTGPEKRVLSGYHAIGQSKINDEDLYDLNEPTKKSTTVFALPELMHNLNLIVNMCEQDIIALDSAQNFASERQTSLEQEKQQLEEIVKLESDHINTLDKVLLLVDELTSNESDINLDRAEKIFLDLQHNYMAEYKQFGLGDLAAGIIAPLLKNHLCDWKPLENPTMYVELIKKWRSILESQNELSAETRGNVFDPYSSLIWAGLIPSFRSCAEFWDPKHHQSMAALLDCWAPLFPTWILDSVLEQLILPRLSKAVRSWDPLTDTVPIHIWILPWNSILGHKMEEFIFPTIREKLGNALQAWMPQDRSARAMLTPWKGAFDDSEMQVFLLQHIIPKLQMVLTEFIINPLQQDLEPWNQVWDWHELIPPIQMAQLLDKYFFPKWMQVLVLWLNQSPDYSEISRWYSAWKSMLTEEVLREPSVKEHLRRALEIMHRATDQTASAMPVGSNINATPVPPPPQPPPPLPTLLDLQVSDPVQLDFKELVSRKCSERGVLFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDGTFKNWLPTPLQPMIERAITGVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00975603;
90% Identity
iTF_00655313;
80% Identity
-