Pobe023785.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phasia obesa
Gene Symbol
sip1
Assembly
GCA_949628195.1
Location
OX451216.1:135067645-135070660[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-95 9.3e-91 305.9 14.4 1 275 420 690 420 690 0.99
2 2 0.92 1.7e+04 -3.3 0.0 245 265 705 725 702 733 0.68

Sequence Information

Coding Sequence
ATGTCTGATAATGAATACGAACGTTTTGAAATAACCGATTATGACTTGGACAATGAGTTTAATCCAAATAGAGCCAGAAGAAAGCAGACCAAGCAGCAGCAGATTTATGGTATTTGGGCTGATGACAGCGACAACGATGAAGAATCTACTGGATGCCGGCGAGGTGGTCGAAAGGGTCGCATGGGTTTGGGTTCCTCTGGCAGTCGTAGTAAAGATTACACTGCTCCGGTCAGCTTTGTAGCCGGTGGTATACAACAGGCTGGCAAGACGAAAGATAAAAAAGGAGACGACAGCATTAACGATGAGGACGAAGAAAATCCCATTACAGATGAGGAAGAAGAAATTAATGCGCGTCAAGGCTTTGGGACTGGTGGTAGGCCTACTTTAATGGATGTGGATTCGGCTCATACTAGCGATGAATCGGAAGAAGAACAGACAACAAGAAAGCCCCAACAAACCCAACAGAAGCCTtcgtattttaaacaaaaccaaaCGGGCAAGTCTAATGTAGGATCCTGGGAACAACACACACGAGGTATAGGAGCCAAGTTGCTTTTGCAAATGGGTTATAAACCTGGCAAAGGTTTGGGTAAAGATTTACAAGGTATATCTCAGCCCGTTGAGGCTCATGTACGTAAAGGTAGGGGTGCTATAGGTGCTTATGGTCCAGAAACGGCAGCCAGTGTCGGTGGTAAGGAGtttAAACCCCAAATCGATGAAGATGTACGCGAGGCTAAAGAGTTTAAAGAAAAGCTTAACAAGTGGAAGAAAGCGGGTGATGCCAAACAGGACAAAGCATCTAAACGTTATTATTATAGAAGCGTAGAGGAGGTATTGGAAAAGagtaaaaattctaattatatTATTGGCGATAAAATAAGTAAAAAGCTTGGAAATGTTCCTGTTATCGATATGACTGGCCCTGAAAAACGTGTCCTTAGTGGCTACCATGCTATAGGCCAATCAAAAGTAATAGAAGAAGATTTATATGACCTTAATGAGCAGCCGAAAAAATCCACTACTTCATTTGCACTACCCGAACTTATGCATAATCTTACACTTATAGTCAACATGTGTGAACAGGATATCATATCGTTAGATTCCGCCCAAAATACTGCCTGTGAAAGACAAGTTTCGCTCGAACAGGAGAAAAAACAGTTAGAAGAAATTGTTAAATTAGAAGACGACCATATTAATACTTTGGACAAAGTTCTATTGCTGGTTAATGAGCTGACTAGCAATGAGTCCGacataaatttagaaagagcagaaaaaatatttattgaattgcAGCAAGATTACATTTCTGAGTATAAACAATTCGGTTTAGGGGATTTGGCAGCCGGTATTATAGCTCCTTTGCTTAAAAATCATCTTTGTGATTGGAAACCTTTAGAAAATCCCACCATGTATGTGGAGTTGATTAAAAAATGGCGTTCAATTTTAGATAGTCAAAATGAGGCACCAACTGAAACACGTTCTAATATATTCGATCCATATTCGTCTCTGATATGGGCAGGTTTAATACCCAGTTTTCGTTCTTGTGCAGAATTTTGGGATCCCAAACATCACCAATCGATGGCTGCTTTATTGGACTGTTGGGCTCCACTATTTCCCACATGGATTTTAGATTCTGTACTAGAGCAATTGATATTGCCACGTTTAAGTACAGCGGTACGTAATTGGGATCCTTTAACTGATACTGTACCTATACATATCTGGATTTTACCTTGGAATTCTATTCTGGGTCATAAAATGGAAGAATTTATATTCCCTACTATTCGGGAAAAGTTGGGTAATGCTCTGCAAGCCTGGTTGCCACAAGATCGTTCTGCAAGGGCCATGTTGACACCTTGGAAGGGAGCATTTGATGACAGtgaaatgcaaatatttttaatgcaacaCATTATACCAAAATTGCAGTTGGTTTTGACGGAATTCATTATCAATCCTTTGCAGCAAGATTTGGAACCCTGGAATCAAGTTTGGGAATGGCAAGAACTTATACCCTCTATACAAATGGCTCAACTTTTAGACAAATATTTCTTTCCCAAATGGATGCAAGTACTTGTTTTATGGCTCAATCAATCACCTGATTATGGCGAAATATCCCGTTGGTATACTGGCTGGAAGAGTATGTTTTCGGAGGAAATTTTAAGAGAACCTAGTGTAAAAGAACACTTACGTCGAGCTCTAGAAATTATGCATCGTGCAACAGATCAGACTGCTTCACCACTAATAATGGGCAGCAATATGGGACCCAATATAACGGCTCAACCAGTACCACCACCACCTCAACCACCACCGCCTCCTTCCACTCTTATAGATCTACAAGTATCCGGTTCATCACAATTAGACTTTAAAGAGATGGTTTCTCGTAAGTGTGCGGAGAGGGGAGTGTTGTTTGCTCCTTTGCCGGGACGGCGAGAGTTGGGAAAACAAATTTATCGTGTGGGCAAGCTGTATTGTTATATTGATCGTAATGTGTGTATGTTAAGTGATGGAACCTTTAAGAATTGGATACCCACACCATTGCAACCGATGATAGAAAGAGCGGTAACGGGGATTTTGAACTaa
Protein Sequence
MSDNEYERFEITDYDLDNEFNPNRARRKQTKQQQIYGIWADDSDNDEESTGCRRGGRKGRMGLGSSGSRSKDYTAPVSFVAGGIQQAGKTKDKKGDDSINDEDEENPITDEEEEINARQGFGTGGRPTLMDVDSAHTSDESEEEQTTRKPQQTQQKPSYFKQNQTGKSNVGSWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVGGKEFKPQIDEDVREAKEFKEKLNKWKKAGDAKQDKASKRYYYRSVEEVLEKSKNSNYIIGDKISKKLGNVPVIDMTGPEKRVLSGYHAIGQSKVIEEDLYDLNEQPKKSTTSFALPELMHNLTLIVNMCEQDIISLDSAQNTACERQVSLEQEKKQLEEIVKLEDDHINTLDKVLLLVNELTSNESDINLERAEKIFIELQQDYISEYKQFGLGDLAAGIIAPLLKNHLCDWKPLENPTMYVELIKKWRSILDSQNEAPTETRSNIFDPYSSLIWAGLIPSFRSCAEFWDPKHHQSMAALLDCWAPLFPTWILDSVLEQLILPRLSTAVRNWDPLTDTVPIHIWILPWNSILGHKMEEFIFPTIREKLGNALQAWLPQDRSARAMLTPWKGAFDDSEMQIFLMQHIIPKLQLVLTEFIINPLQQDLEPWNQVWEWQELIPSIQMAQLLDKYFFPKWMQVLVLWLNQSPDYGEISRWYTGWKSMFSEEILREPSVKEHLRRALEIMHRATDQTASPLIMGSNMGPNITAQPVPPPPQPPPPPSTLIDLQVSGSSQLDFKEMVSRKCAERGVLFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDGTFKNWIPTPLQPMIERAVTGILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00975603;
90% Identity
-
80% Identity
-