Esuc005140.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epicampocera succincta
Gene Symbol
sip1
Assembly
GCA_932527255.1
Location
CAKOBP010000018.1:1527713-1530524[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-96 6.4e-92 308.1 13.9 1 275 421 691 421 691 0.99
2 2 0.13 1.3e+03 -1.1 0.0 245 266 706 727 696 740 0.54

Sequence Information

Coding Sequence
ATGTCCGATAATGAATACGAACGTTTTGAAATAACCGATTATGATCTGGAGAATGAATTCAATCCAAATAGGGCTAGAAAAAAACAAACTAAACATCAGCAAATTTACGGAATTTGGGCTGATGACAGTGACAACGATGATGTTGAAGAATCTTCTGGACGAAGGCGGGCTGGTAGAAAGGGACGTATGGGATTGGGCTCGGTGGGTGGCCGAAGTAAAGACTACTCGGCTCCGGTGAGCTTTGTAGCCGGTGGCATACAACAGTCTGGCAAACAGAAGGATAAAAAGGAAGATGACCCCGACGAGGATGAAGAAAATCCCATAACTGATGAGGAAGAAGAAATGAATTTCCGACCTGGTTTTGGTACAGCCAAAAGACAAACTTTAATGGATGTTGATTCTGCAGGTAGTAGTGATGAGTCGGACGAGGAACAATCAATTAAAATAGCGCAACAAAGCCAACAAAAACCTGCCTATTTAAAAAAAAACCAAGCCGGCGGTCCGAATGTGGGTGCATGGGAACAACACACACGTGGCATAGGAGCAAAACTCTTGTTACAAATGGGTTATAAGCCAGGAAAAGGCTTGGGTAAGGACTTACAAGGCATATCACAGCCGGTAGAGGCACACGTACGCAAAGGCCGGGGCGCTATAGGCGCTTATGGTCCAGAAACGGCTGCCAGTGTAGCTGGTGAAGGACATAAACCACCACAAGTCGATGAGGACGTGCGTGAAACTAAAGAATTCAAAGAAAAGTTGAATAAGTGGAAAAAAGCTGGAGACGCCAAACAGGATAAGGCTTCCAAACGTTATTATTATAAAAGTGTAGAGGAAGTCTTGGAGAAGGGCAAAAATTCCAATTATATTATAACCGATAAAATAAGTAAAAAGTTGGGTAATGTTCCGGTAATCGATATGACTGGACCTGAAAAGCGAGTTTTAAGTGGCTATCATGCTATAGGCCAGTCCAAGGTAATCGATGAAGATCTATACGATCTTAATGAGCCCACTAAGAAATCCACTACGGAATTTGCTTTGCCGGAACTGATGCACAACTTAAATCTCATAGTAAATATGTGTGAACAGGATATTATATCGCTGGATTCAGCCCAAAATGTTGCCAGTGAACGGCAGGCCGGTCTTGAACTCGAGAAGAAACAACTGCAGGAAATTGTTAAATTGGAAAGTGATCATATTAGTACATTGGATAAAGTTCTCGTGCTGGTTGATGAGTTGACCAGCAATGAAAGCGATATAAATTTGGACAGAGCCGAGAAAATATTCCTAGAATTGCAGCAAAACTACATGGCGGAATATAAGCAATTTTGTTTGGGAGATTTGGCTGCCGGTATTATTGCACCTCTTTTGAAAAATCATCTGTGTGATTGGAAACCTCTGGAAAACCCCACCATGTATGTGGACTTGATTAAAAAATGGCGCACCATATTGGAAACTCAAAATGACGCAAACACCGAGACACGTGGCAATGTTTTTGACCCGTACTCTTCATTGGTGTGGGCCGGCTTAATACCCAGTTTCCGTTCTTGCGCTGACTTTTGGGACCCCAAACATCATCAGTCAATGGCTGCTTTATTGGACTGTTGGGCTCCTCTGTTTCCTACCTGGATTTTGGATTCTGTGCTGGAACAATTGATATTGCCACGCTTAAGCAAAGCTGTACGCAATTGGGATCCTTTAACTGATACTGTACCCATTCACATTTGGATTTTGCCCTGGAACACTATCTTGGGTCATAAAATGGAGGAATTCATATTCCCTACTATACGAGAAAAGCTTGGCAATGCTTTGCATGCTTGGATGCCGCAAGATCGTTCGGCTCGCGCCATGTTAACACCCTGGAAGGGGGCTTTCGATGATAGCGAAATGCAAGTCTTCTTATTGCAGCACATTATACCGAAATTGCAAATGGTGTTGACGGAATTTGTTATCAATCCCCTGCAACAAGACTTAGAGCCCTGGAATCAGGTATGGGATTGGCATGAACTTATTCCCCCCATACAGATGGCTCAGCTTCTGGATAAATATTTCTTTCCCAAGTGGATGCAAGTACTTGTTTTGTGGCTCAATCAATCACCAGATTATAGTGAAATTTCCCGCTGGTATTCCGCCTGGAAGAGCATGCTATCCGAGGAAGTTTTGCGAGAGCCAAGTGTTAAAGAACATTTGCGTAGAGCCCTAGAAATAATGCATCGTGCAACCGACCAAACTGCTTCAACAATACCGGCCAATATCACCGCAACACCAGTGCCACCGCCACCACAGCCACCACCACCACTTCCCACGCTCCTAGACCTACAAGCATCCGATCCCGTTCAATTAGACTTCAAAGAATTGGTTTCACGCAAATGCTCGGACAGAGGTGTACTATTTGCCCCTCTGCCTGGCCGCCGTGAATTGGGCAAACAAATTTATCGTGTGGGCAAACTGTTCTGCTACATAGATCGCAACGTTTGTATGCTGAGCGACGGAAGTTTTCAGAACTGGACACCCACACCGTTACAGTCGATGATAGAACGAGCCATAACGGGTATTTTAAATTAA
Protein Sequence
MSDNEYERFEITDYDLENEFNPNRARKKQTKHQQIYGIWADDSDNDDVEESSGRRRAGRKGRMGLGSVGGRSKDYSAPVSFVAGGIQQSGKQKDKKEDDPDEDEENPITDEEEEMNFRPGFGTAKRQTLMDVDSAGSSDESDEEQSIKIAQQSQQKPAYLKKNQAGGPNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVAGEGHKPPQVDEDVRETKEFKEKLNKWKKAGDAKQDKASKRYYYKSVEEVLEKGKNSNYIITDKISKKLGNVPVIDMTGPEKRVLSGYHAIGQSKVIDEDLYDLNEPTKKSTTEFALPELMHNLNLIVNMCEQDIISLDSAQNVASERQAGLELEKKQLQEIVKLESDHISTLDKVLVLVDELTSNESDINLDRAEKIFLELQQNYMAEYKQFCLGDLAAGIIAPLLKNHLCDWKPLENPTMYVDLIKKWRTILETQNDANTETRGNVFDPYSSLVWAGLIPSFRSCADFWDPKHHQSMAALLDCWAPLFPTWILDSVLEQLILPRLSKAVRNWDPLTDTVPIHIWILPWNTILGHKMEEFIFPTIREKLGNALHAWMPQDRSARAMLTPWKGAFDDSEMQVFLLQHIIPKLQMVLTEFVINPLQQDLEPWNQVWDWHELIPPIQMAQLLDKYFFPKWMQVLVLWLNQSPDYSEISRWYSAWKSMLSEEVLREPSVKEHLRRALEIMHRATDQTASTIPANITATPVPPPPQPPPPLPTLLDLQASDPVQLDFKELVSRKCSDRGVLFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDGSFQNWTPTPLQSMIERAITGILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00975603;
90% Identity
iTF_01376632;
80% Identity
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