Ltes014870.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Linnaemya tessellans
Gene Symbol
sip1
Assembly
GCA_951800035.1
Location
OX637533.1:14715529-14718884[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-95 3.7e-91 307.3 15.3 1 275 417 687 417 687 0.99
2 2 0.54 1.7e+04 -3.2 0.0 246 268 703 725 699 730 0.71

Sequence Information

Coding Sequence
ATGTCAGATAATGAATACGAACGGTTCGAAATAACTGATTATGATTTGGACAATGAATTCAATCCAAATAGGCCTAGGAAAAAGCAAACCAAGCATCAACAGATATATGGTATTTGGGCTGACGATAGTGATGAAGATGATGAATCTTGTAGCCGACTACGTGGAGGACGTAAAGGACGTATGGGCTTGGGTTCCTCAGGCAGCCGGAGCAAAGACTATACGGCTCCTGTCAGTTTTGTAGCTGGTGGTATACAGCAGTCGGGCAAGAAAAAAGATAAAGTGGATAGTAACAATGATGACGATGAAGAAAACCCTATCACAGACGAAGATGAAGAGCAAAATGCTCATCCGGGCTTTGGTGCTGGTAGTAGACCAACTTTAATGGATGCAGATTCAGATCATAGTAGTGATGAATCGAATGAAGAAGATTCTCGAAGGTCACAGCAGATGCAACAGAAGCCttcttattttaagcaaaaTCAGATAGGTAATCCTAAAGTCGGATCCTGGGAACAGCACACGCGCGGGATAGGTGCAAAGCTGCTTTTACAGATGGGCTATAAACCAGGCAAAGGTTTGGGTAAAGATTTGCAAGGTATATCGCAACCTGTAGAGGCACATGTACGTAAGGGTAGAGGTGCCATAGGAGCTTATGGTCCCGAGACGGCGGCTAGTGTGGGAGGCAAAGGGCATAAGCCTCAAATCGATGAAGATGTGCGTGAAGCTAAagagtttaaagaaaaattaaataagtggAAGAAAGCGGGAGATGCTAAACAGGATAAAACTGCAAAACGTTATTATTATAAGACTGTAGAAGAAGTATTGGAAAAGGGCAAGAGTTCCAATTACATTATCAGCGATAAAATTAGcaaaaagttgGGTAATGTACCAGTTATTGACATGACAGGACCGGAAAAGCGTGTGCTAAGTGGGTACCATGCTATAGGTCAATCAAAAATAATCGACGAAGATTTTTATGAAGTTAGCGAAATGCCCAAAAAATCAACTACATCATTTGCTTTGCCGGAACTTATGCACAATCTTACACTAATAGTTAATATGTGCGAACAGGATATAATATCGCTAGATTCATCCCAGAATGCTGCATTTGAAAGACAATTATCACTCGAGCAAGAGAGAAGTCAACTTGAAGAAATTGTTCAATTAGAAAATGCCCATATTAATACTTTGGATAAAGTTTTGTCTCTGGTGGATGAGTTGACCAGCAATGAAACTGATTTGACTTTAGAACGAGCTGAGAAAATATTCCTAGAATTACAGCAAGATTACATAGCCGAGTATAAACAATTCGGCTTGGGTGACCTGGCCGCTGGCATTATAGCGCCCTTGCTGAAAAATCATCTCTGTGATTGGAAACCTTTGGAAAATCCCACCATGTATGTggagttaattaaaaaatggcgCTCAATCTTAGAAAGCCAAAACGATGCACCAACAGAAACACGTTCTAATGTATTTGATCCTTATTCTTCGCTGGTATGGGCAGGGGTAATTCCAAGTTTTCGTTCTTGTGCAGAGTTTTGGGATCCTAAACATCATCAATCAATGGCAGCTCTGTTAGACTGTTGGGCACCACTTTTTCCCACATGGATTTTGGATTCTGTACTAGAGCAGTTAATATTGACGCGTTTGAGTACGGCGGTACGTAATTGGGATCCTCTAACTGATACTGTGCCCATACATATCTGGATATTACCGTGGAATTCTATTTTGGGTCATAAAATGGAGGAATTCATATTTCCTACTATAAGAGAAAAATTGGGTAACGCTTTGCAAGCCTGGATGCCTCAAGATCGTTCCGCACGCGCTATGCTAACGCCTTGGAAGGGAGCATTCGATGAGAGTGAAATGCAAGTTTTCCTACTGCAGCATATTATACCAAAACTACAGATGGTTTTGACAGAATTTGTTATAAATCCATTGCAGCAAGAATTGGAACCTTGGAATCAAGTATGGGAATGGCATGAGCTTGTAccctccatacagatggcacAACTGTTGGACAAACATTTCTTTCCAAAATGGATGCAAGTTTTGGTTTTATGGCTCAATCAATCACCGGATTATGGGGAAATTTCACGCTGGTATTCTGGATGGAAAAGTATGTTTCCCGAGGACATTTTAAGAGAGCCCATGATTAAAGAACACTTACGTAGAGCTCTAGACATAATGCATCGTGCTACAGATCAGACTGCAGCTACACCCTTAACAACTGGCAATAATATGGGGGCGACACCGGTGCCACCGCCTCCtcaaccaccaccaccaccctCCCTCATGGATCTACAAGTGCCAGTTCCAACCCAATTGGACTTTAAGGAACTCGTATCGCGTAAATGTGCTGAGAAGGGTGTACTATTTGCACCACTGCCCGGACGCCGTGAACTTGGCAAACAAATCTATCGTGTGGGCAAGCTGTATTGTTATATTGACCGTAATGTTTGTATGCTAAGTGATGGATCATTTAAGAATTGGATGCCGACGCCATTACAATCGATGATAGAACGCGCTGTTACGGgcattttaaattaa
Protein Sequence
MSDNEYERFEITDYDLDNEFNPNRPRKKQTKHQQIYGIWADDSDEDDESCSRLRGGRKGRMGLGSSGSRSKDYTAPVSFVAGGIQQSGKKKDKVDSNNDDDEENPITDEDEEQNAHPGFGAGSRPTLMDADSDHSSDESNEEDSRRSQQMQQKPSYFKQNQIGNPKVGSWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVGGKGHKPQIDEDVREAKEFKEKLNKWKKAGDAKQDKTAKRYYYKTVEEVLEKGKSSNYIISDKISKKLGNVPVIDMTGPEKRVLSGYHAIGQSKIIDEDFYEVSEMPKKSTTSFALPELMHNLTLIVNMCEQDIISLDSSQNAAFERQLSLEQERSQLEEIVQLENAHINTLDKVLSLVDELTSNETDLTLERAEKIFLELQQDYIAEYKQFGLGDLAAGIIAPLLKNHLCDWKPLENPTMYVELIKKWRSILESQNDAPTETRSNVFDPYSSLVWAGVIPSFRSCAEFWDPKHHQSMAALLDCWAPLFPTWILDSVLEQLILTRLSTAVRNWDPLTDTVPIHIWILPWNSILGHKMEEFIFPTIREKLGNALQAWMPQDRSARAMLTPWKGAFDESEMQVFLLQHIIPKLQMVLTEFVINPLQQELEPWNQVWEWHELVPSIQMAQLLDKHFFPKWMQVLVLWLNQSPDYGEISRWYSGWKSMFPEDILREPMIKEHLRRALDIMHRATDQTAATPLTTGNNMGATPVPPPPQPPPPPSLMDLQVPVPTQLDFKELVSRKCAEKGVLFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDGSFKNWMPTPLQSMIERAVTGILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00975603;
90% Identity
iTF_00900578;
80% Identity
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