Tsol006197.2
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- sip1
- Assembly
- GCA_947397855.1
- Location
- OX377611.1:73079930-73082818[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-93 2.3e-89 299.9 18.1 1 275 422 692 422 692 0.99 2 2 0.68 4.8e+03 -2.9 0.0 245 269 707 731 699 737 0.68
Sequence Information
- Coding Sequence
- ATGTCAGATAATGAATATGAGCGATTTGAAATAACCGACTACGATTTGGACAATGAATTCAATCCAAATAGGCCCAGAAAAAAGCATACCAAACAGCAACAAATTTATGGAATTTGGGCTGATGATAGTGACAATGATGACGATGAAGAATCTGGGCGACGACGTGGCGGACGAAAAGGCCGCATGGGCTTGGGTTCTACAGGCAGTCGTAGTAAAGATTACACAGCTCCAGTCAGTTTTGTGGCTGGTGGTATACAACAGTCTGGCAAAAAAAATAAGAGGAAAGATGAGGATGAGGATGAGGATGAAGATGAAGAAAATCCAATTACGGATGAAGAAGAAGAGGTAAATGCTCATCCAGGCTTTGGTACAGGTAGTAAAGCTACTTTGATGGATGTAGATTCCCCCCAGACAAGTGATGAATCGGAAGAAGAAGAAGCAACTAAAAAACCGCAACAAGTGCAACAGAAACCTTCGTATTTTAAAAATAATCAAGTAAGAAAATCTAAAGTAGGAGCGTGGGAACAACATACACGTGGTATAGGAGCGAAGTTGCTGCTGCAGATGGGTTATAAACCCGGTAAAGGCTTAGGTAAAGACTTACAAGGTATTTCGCAGCCAGTAGAGGCTCATGTGAGAAAAGGTAGAGGTGCAATAGGTGCTTATGGTCCGGAGACGGCTGCTAGTGTGGGAGGTACAGTGCAGCAAAAACCGGCAATCGATGAAGATGTTCGCGAGGCCAAAGAGTTTAAAGAAAAACTAAACAAATGGAAGAAAGGTGGAGATTCTAAGCTGGACAAGACAACGAAACGGTATTATTACAGAAGCGTTGAGGAGGTTTTGGAAAAGGGTAAAAACTCCAATTATATTATCAGTGATAAAATTAGTAAAAAGCTTGGCAATGTGCCAGTTATTGATATGACGGGCCCGGAAAAGCGAGTTCTTAGTGGCTACCACGCTATAGGTCAATCTAAAGTAATGGATGAAGATTTATATGATGTTACAGAACAGCCGAAAAAATCAACTACGTCATTTGCTTTACCGGAACTGATGCATAACCTTACACTTATAGTTAATATATGTGAACAGGACATTATATCGCTAGATTCAGCACAAAATGTAGCCTGTGAAAGGCAAATAGCTCTTGAGCAAGAGAAAAAACAGCTCGAAGAAATTGTTAAACTTGAAAGTGATCACATTAATACTTTGGATAAAGTTCTCTCTTTAGTTGATGAACTGACCAGCAATGAAGCTGAATTGAATTTGGAAAGAGCTGAAAAAATATTTCTTGAGTTGCAGCAAGATTATGTATCCGAATATAAACAGTTTGGCTTAGGAGATTTGGCTGCCAGCATTATAGCCCCCCTGCTGAAAATTCATCTTTCCGATTGGAAACCACTGGAAACTCCTACTATGTATGTGGATTTAATTAAAAAGTGGCGTTCAATTTTGGAAAGTCAAAATGATTCAAACACTGAAACTCGTTCCAACATATTTGATCCATATTCTTCTCTGGTATGGGCAGGAGTTATACCCAGTTTTCGTTCTTGCGCAGAATTTTGGGATCCGAAACATCATCAATCGATGGCTGCTTTATTAGACTGTTGGGCTCCATTGTTTCCCACTTGGATTCTAGATTCTGTCTTAGAGCAATTAATATTGCCCCGTTTAAGTACAGAAGTACGACTTTGGGATCCTTTAACTGATACTGTGCCCATACATATTTGGATTTTGCCATGGAATTCAATATTGGGTCATAAAATGGAAGAATTTATTTTTCCTACTATAAGAGAAAAATTAGGTAATGCTTTGCAAGCGTGGATGCCACAAGATCGTTCGGCTCGTGCCATGTTAACACCTTGGAAGGAATCGTTTGATGAGAGAGAAATGCAAGTTTTCTTATTACAACATATTATACCAAAATTGCAAATGGTTTTGAATGAATTTGTTGTAAGTCCTTTGCAACAAGATTTGGAACCGTGGAATCAAGTATGGGAATGGAATGAGCTTATACCATCCATGCAAATGGCACAACTTTTAGACAAGTATTTCTTTCCAAAATGGATGCAAGTACTGGTTTTATGGCTCAATCAATCACCAGATTATAGCGAAATATCGCGTTGGTATTCAGGCTGGAAAAGTATGTTTTCAGAAGAAATTTTAAGGGAGCCTGCCGTTAAAGAACACTTACGACGTGCTCTGGAAATAATGCATCGAGCTACAGATCAGACTGCCACACCATTACAAACTAGTAGCAATGTAGGCCCTAATTTAATGGCTACACCAGTACCGCCACCACCTCATCCACCTGTACCTCCATCACTTATGGACTTGCAAGTAACAGCGCCTGCTCAATTAGAGTTTAAAGAGTTGGTTTCACGTAAATGTGCCGAAAGGGGTGTATTATTTGCTCCTCTGCCGGGGCGTCGTGAACTTGGCAAACAAATCTATCGTGTGGGAAAATTGTATTGTTATATTGATCGTAATGTGTGTATGTTAAGTGATGGGACTTTTAAAAATTGGATACCCACACCGTTGCAACCGATGATTGAAAGAGCTTTAACGGGAGTTTTAAATTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNPNRPRKKHTKQQQIYGIWADDSDNDDDEESGRRRGGRKGRMGLGSTGSRSKDYTAPVSFVAGGIQQSGKKNKRKDEDEDEDEDEENPITDEEEEVNAHPGFGTGSKATLMDVDSPQTSDESEEEEATKKPQQVQQKPSYFKNNQVRKSKVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVGGTVQQKPAIDEDVREAKEFKEKLNKWKKGGDSKLDKTTKRYYYRSVEEVLEKGKNSNYIISDKISKKLGNVPVIDMTGPEKRVLSGYHAIGQSKVMDEDLYDVTEQPKKSTTSFALPELMHNLTLIVNICEQDIISLDSAQNVACERQIALEQEKKQLEEIVKLESDHINTLDKVLSLVDELTSNEAELNLERAEKIFLELQQDYVSEYKQFGLGDLAASIIAPLLKIHLSDWKPLETPTMYVDLIKKWRSILESQNDSNTETRSNIFDPYSSLVWAGVIPSFRSCAEFWDPKHHQSMAALLDCWAPLFPTWILDSVLEQLILPRLSTEVRLWDPLTDTVPIHIWILPWNSILGHKMEEFIFPTIREKLGNALQAWMPQDRSARAMLTPWKESFDEREMQVFLLQHIIPKLQMVLNEFVVSPLQQDLEPWNQVWEWNELIPSMQMAQLLDKYFFPKWMQVLVLWLNQSPDYSEISRWYSGWKSMFSEEILREPAVKEHLRRALEIMHRATDQTATPLQTSSNVGPNLMATPVPPPPHPPVPPSLMDLQVTAPAQLEFKELVSRKCAERGVLFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDGTFKNWIPTPLQPMIERALTGVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00975603;
- 90% Identity
- -
- 80% Identity
- -