Nfer012895.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nowickia ferox
Gene Symbol
sip1
Assembly
GCA_936446695.1
Location
CAKZFO010000092.1:2484448-2487441[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-96 4.5e-92 309.6 13.8 1 275 419 689 419 689 0.99

Sequence Information

Coding Sequence
atgTCCGACAATGAATATGAACGTTTTGAAGTAACTGATTACGACTTAGATAATGAATTCAATCCGAATAGGGCCAGAAAAAAGCAAACCAAACATCAACAAATTTACgGTATTTGGGCTGATGATAGCGATAACGACGAAGACGAAGAACCTACTGGACGACGGCGTGGAGGAAGAAAGGGCCGTATGGGCTTAGGGTCCTCAGGTAGTCGTAGTAAAGATTACACTGCCCCTGTCAGTTTTGTAGCCGGTGGAATACAACAGTCtggcaagaaaaaagatattgatgatgAGGAGGATGAGGAAAATCCGATCACagatgaagaagaagaaataaTTACTCGTCCTGGCTTTGGTACAGGAGGTAGTAAGCCAACTTTAATGGATGTTGATTCGGCTCATACTAGTGATGAATCgaatgaagaagaagaagacttAAGAAAGCCACAACAAACGCAACATAAGCCTTCGTACTTCAAGCAAAATCAAGCAGGCAATTCTAATGTAGGTGCTTGGGAGCAGCATACCCGTGGTATCGGAGCCAAGTTGCTCTTTCAGATGGGCTATAAACCAGGTAAAGGTTTGGGGAAAGACCTACAAGGTATATCGCAGCCTGTTGAAGCTCATGTGCGTAAAGGTAGAGGAGCCATAGGAGCTTATGGTCCAGAGACGGCTGCCAGTGTGGGAGGAAAAGCGCCTATACCTCAAATAGATGAAGATGTACGCGAGGCTAAAGAGTTCaaggaaaaactaaacaaatggaGGAAAGCAGGAGATGCTAAACAGGACAAGACTGCGAAACGTTATTATTACAAAACCGTAGAAGAAGTGCTGGAAAAGGGGAAAAACTCTAATTATATTATAAACGATAAAAttagcaaaaagctTGGCAATGTGCCTGTTATCGACATGACTGGCCCAGAGAAACGTGTACTCAGCGGCTATCATGCCATAGGCCAGTCGAAAGTAATCGAGGAGGATTTGTATGAGCTGAATgaacaaccgaaaaaatcaacTAAATCATTTGCGCTACCCGAACTCATGCACAATCTAACTCTTATAGTTAATATGTGTGAACAGGATATAATATCGCTAGATTCAGCCGAGAACGCTGCCAGTGAAAGACAAGTAGCTCTCGAGCAGGAGAAAAGGCAGCTGGAGgaaattgttaaattagaaAGTGCTCACATTAATACGTTGGATAAAGTTCTATCTTTGGTTGATAAGTTGACCAATAATGAAAGtgatttaaatttagaaagagcTGAGAAAATATTCCTAGAATTACAGCAAAATTATATAGCTGAGTATAAACAATTTGGTTTGGGGGATTTGGCTGCTGGTATTATAGCTCCGTTGCTAAAGAACCATTTGTGTGATTGGAGACCTTTGGAAAACCCCACCCTGTATGTagacttaattaaaaaatggcGTGGAATTTTGGAAAATCAAAACGACTCGGCAGCGGAAACACGTTCCAATATATTTGATCCCTATTCTTCTCTGGTATGGGCAGGACTAATACCCAGTTTTCGTTCTTGTGCTGAATTTTGGGATCCTAAACATCATCAGTCGATGGCTGCATTGTTGGACTGTTGGGCTCCTCTTTTTCCCACCTGGATTTTGGATTCAGTGCTGGAGCAATTGGTATTGCCCCGCTTGAGTACCGCGGTACGCAATTGGGATCCTTTAACCGATACTGTGCCCATACATATCTGGATTTTGCCTTGGAATTCTATTCTTGGTCATAAAATGGAGGAATTTATATTCCCTACCATACGAGAAAAATTGGGTAATGCCTTGCAAGCGTGGATGCCTCAAGATCGTTCGGCTAGGGCCATGTTAACACCCTGGAAGGGAGCATTTGATGAGAGTGAAATGCAAATTTTCTTATTGCAGCATATTATACCAAAGTTGCAGATGGTATTGTCGGAATTTGTTATCAATCCCCTGCAGCAGGACTTGGAACCCTGGAATCAGGTATGGGAATGGCACGAACTTATACCAGCCATGCAGATGGCACAACTCTTAGACAAGCATTTCTTTCCGAAATGGATGCAAGTACTTGTTTTATGGCTCAATCAGTCACCAGACTATGGTGAAATCTCGCGCTGGTATACCGGTTGGAAAAGTATGTTTTCGGAGGAAATTTTAAGGGAACCCAATGTAAAAGAACATCTGCGCCGAGGCTTAGAAATTATGCATCGTGCTACAGATCAGACGGCTGGCAATAGTATGGGAGCTAATATTACCGCAACGCCGGTACCGCCACCTCTTCAGCCAACACCGGTGCCACCTCACTCCCTTCTGGACCTACAAGTATCAGCTCCCGTCCAATTAGATTTCAAGGAGTTAGTTTCACGTAAATGTGCTGATAGGGGTGTATTATTTGCTCCCTTGCCGGGACGTCGTGAACTGGGCAAACAGATCTATCGTGTGGGCAAGCTGTATTGTTATATTGATCGTAATGTGTGCATGCTAAGTGATGGCACTTTCAAAAATTGGATACCCACACCGCTGCAACCGATGATAGAGCGGGCTGTTACaggaattttaaattaa
Protein Sequence
MSDNEYERFEVTDYDLDNEFNPNRARKKQTKHQQIYGIWADDSDNDEDEEPTGRRRGGRKGRMGLGSSGSRSKDYTAPVSFVAGGIQQSGKKKDIDDEEDEENPITDEEEEIITRPGFGTGGSKPTLMDVDSAHTSDESNEEEEDLRKPQQTQHKPSYFKQNQAGNSNVGAWEQHTRGIGAKLLFQMGYKPGKGLGKDLQGISQPVEAHVRKGRGAIGAYGPETAASVGGKAPIPQIDEDVREAKEFKEKLNKWRKAGDAKQDKTAKRYYYKTVEEVLEKGKNSNYIINDKISKKLGNVPVIDMTGPEKRVLSGYHAIGQSKVIEEDLYELNEQPKKSTKSFALPELMHNLTLIVNMCEQDIISLDSAENAASERQVALEQEKRQLEEIVKLESAHINTLDKVLSLVDKLTNNESDLNLERAEKIFLELQQNYIAEYKQFGLGDLAAGIIAPLLKNHLCDWRPLENPTLYVDLIKKWRGILENQNDSAAETRSNIFDPYSSLVWAGLIPSFRSCAEFWDPKHHQSMAALLDCWAPLFPTWILDSVLEQLVLPRLSTAVRNWDPLTDTVPIHIWILPWNSILGHKMEEFIFPTIREKLGNALQAWMPQDRSARAMLTPWKGAFDESEMQIFLLQHIIPKLQMVLSEFVINPLQQDLEPWNQVWEWHELIPAMQMAQLLDKHFFPKWMQVLVLWLNQSPDYGEISRWYTGWKSMFSEEILREPNVKEHLRRGLEIMHRATDQTAGNSMGANITATPVPPPLQPTPVPPHSLLDLQVSAPVQLDFKELVSRKCADRGVLFAPLPGRRELGKQIYRVGKLYCYIDRNVCMLSDGTFKNWIPTPLQPMIERAVTGILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00975603;
90% Identity
iTF_01399447; iTF_01398479; iTF_01397426;
80% Identity
-