Basic Information

Insect: Lasioglossum zephyrum
Gene Symbol: stc
Assembly: GCA_028455615.1
Location: CM052333.1:1673801-1678715[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2e+04 -4.4 1.6 15 19 571 575 570 575 0.81

2 13 0.086 8.7e+02 0.3 0.4 4 10 604 610 603 610 0.95

3 13 2.1e-05 0.22 11.8 13.9 4 18 621 635 619 636 0.94

4 13 1.3e-07 0.0014 18.8 17.7 1 18 672 689 672 690 0.97

5 13 1.4 1.4e+04 -3.6 0.8 6 10 718 722 717 722 0.88

6 13 5.9e-10 6e-06 26.4 12.5 1 19 728 746 728 746 0.98

7 13 1.3e-05 0.13 12.5 11.1 4 18 793 807 786 808 0.86

8 13 2 2e+04 -4.7 1.6 5 10 837 842 837 842 0.90

9 13 0.0006 6.1 7.2 8.4 1 11 848 858 848 859 0.97

10 13 1.2e-10 1.3e-06 28.5 14.3 1 19 875 893 875 893 0.98

11 13 2 2e+04 -6.7 8.9 10 19 940 950 929 950 0.77

12 13 6.7e-07 0.0068 16.6 12.6 1 16 986 1001 986 1012 0.85

13 13 2.5e-05 0.26 11.5 11.2 1 19 1018 1037 1018 1037 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2e+04	-4.4	1.6	15	19	571	575	570	575	0.81
2	13	0.086	8.7e+02	0.3	0.4	4	10	604	610	603	610	0.95
3	13	2.1e-05	0.22	11.8	13.9	4	18	621	635	619	636	0.94
4	13	1.3e-07	0.0014	18.8	17.7	1	18	672	689	672	690	0.97
5	13	1.4	1.4e+04	-3.6	0.8	6	10	718	722	717	722	0.88
6	13	5.9e-10	6e-06	26.4	12.5	1	19	728	746	728	746	0.98
7	13	1.3e-05	0.13	12.5	11.1	4	18	793	807	786	808	0.86
8	13	2	2e+04	-4.7	1.6	5	10	837	842	837	842	0.90
9	13	0.0006	6.1	7.2	8.4	1	11	848	858	848	859	0.97
10	13	1.2e-10	1.3e-06	28.5	14.3	1	19	875	893	875	893	0.98
11	13	2	2e+04	-6.7	8.9	10	19	940	950	929	950	0.77
12	13	6.7e-07	0.0068	16.6	12.6	1	16	986	1001	986	1012	0.85
13	13	2.5e-05	0.26	11.5	11.2	1	19	1018	1037	1018	1037	0.95

Sequence Information

Coding Sequence: ATGGCTACATGGGATGGTTCGTATTCTGAGCCGGATGATCAACATTTTTATTTGTACTCTGATCAAAATGTTGCTGCTTCTACGACCGGAAGCTGGACATTTTTTCCTAACGATGTAAGTAACGATTATACACGAGAAAATCGAGAATTTTATGTGCAAAATGATTCTGTGTTCCACCAAAATTGTCCAAGTACTTTATATCATTCGAATACGAATGTAATGGCCAACATTGTGACTAGTGGTCGTAGTTATCAGGGACATTTAAGAAATGCCTCAAATAATTCGGAAACGTCCACTGATATGCAACACTTGCCAAAAAATGTAAAACCAGAAAATTGCTTTGTACCTGCTGTTGATTATTGGAGCAACGATTACGATGCCAACGAGACCAAGATTAAACATAGTTATGCAAAAGGAACTAAACAAGTTGCAACCGTTGTGAAAAAAGAGTCAAACTTACATGCTACTGCTCGAGAATTTGTACCGAATCTGAATTCCAAGTCTGCTAATAGAAGACAGGATTCGCAAAATATGGAGCTTCCTTGTTCCATCGACCGCTGTTACACTGCTGACTGTTATACCAGAGATACAAAACTTACAGAAGAAGAAACAACCGCCGATAGATATTCAATGTCGATCGATAATGTAAATAAATGCGAACAAAAACAATATGAAAACAAAAGAAATTATAAACTCAAAGAAGGACAACAAGATCATCAATTTTATAGAAAAAACAGATATACCAACTCGTATCATCAAAGAGGCAGAAATTCTTACAAGTTTCAAGGTAATAAATATTATACTAATAAACATTATTCGGACAGATTGCAAGCAGATATACAAGATGTATCTAGCTTAAACAAGGAAGAACTGTATTCTAGTACGGATATAAATCTGCATAGGAATAAAAAGTTTGAAAAATCGATTGAAAACAAGGATAGAAGAAACACTATTACCAAAGACAATAACATAGAGTCTAATGGCATAAAGCAGTCTAACAATCAAGACAAAGAATTTACATATTCTAGTTCAGGTTCAGGTTCAGGGTCGAAACAATCGAATACATACCATAAAAACGCAAGGAAATATCCATATAATGCTAGACATAATAGGGAGGAATACAATTACAAAGAAAGAAAACATAATTATCAAGGGCAGAATGGAACTTGGCAAGGTTGTACCATGGAAGACAAGCAGCAATCGGATAGAAACGAACAAACATGCAATCGAAGAGATTCTAATGAAGCTAAGCAAGATATTAGCGAAGAAACTGTGGTAAATAAAGCTGTGGTAAAAGAAACCAAAGAAAGAGCATACAATTATCAAGGACGCAACGGATTCAAAGAACACAGAAAAGGAGAGAAAACTGAAGCGTACAAAGAGAGGGATAGAAGCAAGAATAGTATATTCGATAATAAAGAAAAGGAAAATGAAAATTGGAGGAATAAGGGAGAAATCGGTGAAAAGGGCAGTGAAAAAGGCAGTATTCAAAAACGAATACAACATAGAAGATCTCCGCTCGATGACGATGCGAGTCAAAGGGAAAGACTAGCCGATCAATTAAACAGAGGACAGCTGGAATGTTTAGTATGTTGCGAGTGGATTAGACAGAACGACTATATTTGGTCGTGTTCTAATTGCTATCATGTTTTACACCTGAAATGTGTGAAAAAATGGGCAAAATCTTCGCAAGCAGATAACGGTTGGAGATGTCCAGCATGTCAGAATGTAAGTATAACGATTCCCGACGAGTATTTCTGCTTCTGCGGTAAGACAAGAGCTCCAGAATGGAATCGTAGAGATGTTGCGCATTCTTGCGGAGAAGTTTGTGGCAGAACATTATCAAAAAATACTTGTCCTCACAAGTGTACTCTTCTCTGTCATCCTGGATCTTGTCCGCAATGCGTAGCAATGGTTACCAGATATTGTGGCTGTGGTAAAACATCGCAAACGGTACAATGTAGTGCGCACAAGCTATTGTTGTGCGACGATACGTGCGATAAGGATTTAAATTGTGGCACGCATAAATGCGAGAAAAAGTGTCATCACGGAGAATGTCAAAGTTGCGAGAAAACAGTTGAGCAAGAATGTTATTGTGGTAAAGACAAAAGAAAAATAACTTGTCAAAGTAATATTTCGCTTACGTACTCTTGCAAAAGCGTCTGCGGTAAATTATTAGATTGTGGTAATCATACGTGCGCCAAGCTTTGCCATCCAGGTGTCTGCGATCCATGTAGTTTGACCCCGGAGAAAGTAACGACGTGTTGCTGCGGCCAAACACCGTTGACAGAGGAACGACAAACTTGTTTAGACCCAATTCCGGTTTGCGACAAAGTATGTTCGAAAAGTCTAAAATGTGGTCAACCGAATAATCCCCACATATGCAAAGCAACGTGTCACGAAGGGGATTGTCCTATTTGCGATTTAACTACAGACGTTAAGTGTCGTTGTGGAAACATGGACAGAGAAATAGCTTGTAAGGATTTAATATCAAAAGCTGACGATGCTCGATGTGAAAAACGATGCACAAAGAAACGATCCTGTGGCAAACATAAATGTAACCAGCTGTGTTGCATAGAAGTAGAACACGTTTGTCCTTTGATGTGTAGTAAAACTTTGAGTTGCGGTAAACACAAATGTGAACAAACTTGTCATAAAGGAAGGTGTCAACCTTGTTGGCGTAGCAGCTTTGAAGAATTATATTGCGAATGTGGAGCTGCCGTGATATATCCTCCAGTGCCCTGTGGTACTAGAAGACCCGTTTGCGATAGGTCTTGTTCTCGTCAGCATTCCTGTGGGCACGAGGTGTTTCATAATTGTCATAACGAGCCTACATGTCCTCCCTGTACCGTCCTTACGCAGAGGTGGTGTCACGGTAAACACGAGCTTCGTAAAGCTGTACCGTGTCACTTTAATGGAATTTCGTGCGGTTTACCGTGTAACAAGCCTATTTCTTGCGGTCGACACAAATGTCTTGCAATTTGTCATCCTGGTCAGTGTGAAAAACCTGGACAACAATGTTCCCAACCGTGTACTATTCCAAGAGAAATGTGTGGACACATTTGCGCCGCTCCGTGTCATGACGGCAAATGCCTAGACACACCGTGCAAAGAAATGGTCAAGgtaacatgtcagtgcggacatagaactacatctcgtgcttgtgcagagaattcgaaagagtatcaaagaatagcgagcagcatattagctagtaaaatggctgatatgcaactaggtcattccgttgatttggaagaagtgtttggtcaaggtgcaaaaaaacagaatcagttgaaaacgctagaatgtaatgacgaatgcaaactgatagaacgaaatcgaagattagcactaggtttgcaaattgtaaacccggatttgagtggaaaattaatgcccagatatagtgaTTTCATGAAGCAGTGGGCTAAAAAGGATCCACTCTTTTGTCAAATGGTCCATGAAAAATTGACAGAATTAGTTCAATTGGCAAAGACCTCGAAGCAAAAATCGCGCAGTTATTCGTTCGATAGCATGAACAAAGATAGACGTCATTTCATTCACGAATCCTGCGAGCATTTTGGGTGTGAAAGTCAAGCATACGATCAGGAGCCTAAAAGAAATGTTGTTGCCACTGCTGTGAAAGATAAGTGTTGGTTGCCGAGCTACAGTTTATTAGAAATCGTGCAACGAAATAATGGTCAGAGAAAAGTTCCTGGTCCAATGTTGAATACTTCGAAAGCTAACGGATCTGTAAAGACGATATTGTCACTGCCTACGAAAAAGAACCAAAAAGTAGAAATACAGTCTAATACAAAAATGCCGGAACCAGAACCAGAACTAGAACCAGAAATAGACTACTTTGattacaaaggttaa
Protein Sequence: MATWDGSYSEPDDQHFYLYSDQNVAASTTGSWTFFPNDVSNDYTRENREFYVQNDSVFHQNCPSTLYHSNTNVMANIVTSGRSYQGHLRNASNNSETSTDMQHLPKNVKPENCFVPAVDYWSNDYDANETKIKHSYAKGTKQVATVVKKESNLHATAREFVPNLNSKSANRRQDSQNMELPCSIDRCYTADCYTRDTKLTEEETTADRYSMSIDNVNKCEQKQYENKRNYKLKEGQQDHQFYRKNRYTNSYHQRGRNSYKFQGNKYYTNKHYSDRLQADIQDVSSLNKEELYSSTDINLHRNKKFEKSIENKDRRNTITKDNNIESNGIKQSNNQDKEFTYSSSGSGSGSKQSNTYHKNARKYPYNARHNREEYNYKERKHNYQGQNGTWQGCTMEDKQQSDRNEQTCNRRDSNEAKQDISEETVVNKAVVKETKERAYNYQGRNGFKEHRKGEKTEAYKERDRSKNSIFDNKEKENENWRNKGEIGEKGSEKGSIQKRIQHRRSPLDDDASQRERLADQLNRGQLECLVCCEWIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVSITIPDEYFCFCGKTRAPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCVAMVTRYCGCGKTSQTVQCSAHKLLLCDDTCDKDLNCGTHKCEKKCHHGECQSCEKTVEQECYCGKDKRKITCQSNISLTYSCKSVCGKLLDCGNHTCAKLCHPGVCDPCSLTPEKVTTCCCGQTPLTEERQTCLDPIPVCDKVCSKSLKCGQPNNPHICKATCHEGDCPICDLTTDVKCRCGNMDREIACKDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHVCPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCDRSCSRQHSCGHEVFHNCHNEPTCPPCTVLTQRWCHGKHELRKAVPCHFNGISCGLPCNKPISCGRHKCLAICHPGQCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPLFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRNNGQRKVPGPMLNTSKANGSVKTILSLPTKKNQKVEIQSNTKMPEPEPELEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00866397; iTF_00184290; iTF_00863650; iTF_00861576; iTF_00860812; iTF_00862253; iTF_00862966; iTF_00763582; iTF_00864330; iTF_00966351; iTF_00762933; iTF_00183646; iTF_00865696; iTF_00024966; iTF_01071316;
90% Identity: iTF_00863650;
80% Identity: -