Basic Information

Insect: Lasioglossum vierecki
Gene Symbol: stc
Assembly: GCA_028455595.1
Location: CM052340.1:16822402-16826903[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.1e+04 -4.2 1.6 15 19 430 434 429 434 0.81

2 13 0.076 7.8e+02 0.4 0.4 4 10 463 469 462 469 0.95

3 13 1.9e-05 0.19 12.0 13.9 4 18 480 494 478 495 0.94

4 13 1.2e-07 0.0012 19.0 17.7 1 18 531 548 531 549 0.97

5 13 1.2 1.3e+04 -3.5 0.8 6 10 577 581 576 581 0.88

6 13 5.2e-10 5.3e-06 26.5 12.5 1 19 587 605 587 605 0.98

7 13 1.1e-05 0.12 12.6 11.1 4 18 652 666 645 667 0.86

8 13 2 2.1e+04 -4.5 1.6 5 10 696 701 696 701 0.90

9 13 0.00053 5.4 7.3 8.4 1 11 707 717 707 718 0.97

10 13 1.1e-10 1.1e-06 28.7 14.3 1 19 734 752 734 752 0.98

11 13 2 2.1e+04 -8.3 10.7 10 19 799 809 788 809 0.77

12 13 7e-07 0.0072 16.5 12.9 1 16 845 860 845 871 0.85

13 13 2.2e-05 0.23 11.7 11.2 1 19 877 896 877 896 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.1e+04	-4.2	1.6	15	19	430	434	429	434	0.81
2	13	0.076	7.8e+02	0.4	0.4	4	10	463	469	462	469	0.95
3	13	1.9e-05	0.19	12.0	13.9	4	18	480	494	478	495	0.94
4	13	1.2e-07	0.0012	19.0	17.7	1	18	531	548	531	549	0.97
5	13	1.2	1.3e+04	-3.5	0.8	6	10	577	581	576	581	0.88
6	13	5.2e-10	5.3e-06	26.5	12.5	1	19	587	605	587	605	0.98
7	13	1.1e-05	0.12	12.6	11.1	4	18	652	666	645	667	0.86
8	13	2	2.1e+04	-4.5	1.6	5	10	696	701	696	701	0.90
9	13	0.00053	5.4	7.3	8.4	1	11	707	717	707	718	0.97
10	13	1.1e-10	1.1e-06	28.7	14.3	1	19	734	752	734	752	0.98
11	13	2	2.1e+04	-8.3	10.7	10	19	799	809	788	809	0.77
12	13	7e-07	0.0072	16.5	12.9	1	16	845	860	845	871	0.85
13	13	2.2e-05	0.23	11.7	11.2	1	19	877	896	877	896	0.95

Sequence Information

Coding Sequence: CAAGTTGCAACCGTTGTGAAAAAAGAGTCAAACTTACATGCTACTGCTCGAGAATTTGTACCAAATCTGAATTCCAAGTCTGCTAATAGAAGGCAGGATTCGCAAAATATGGAGCTTCCTTGTTCCATCGACCGCTGTTACACTGCTGACTGTTATACCAGAGATACAAAACTTACAGAAGAAGAAACAACCGTCGATAGATATTCGACGTCGATCGATAATGTAAATAAATGCGAACAAAAACAATACGAAAACAAAAGAAATTATAAACTCAAAGAAGGACAACAAGATCATCAATTTTATAGAAAAAACAGATATACCAACTCGTATCATCAAAGAGGCAGAAGTTCTTACAAGTTTCAAGGTAATAAATATTATACTAATAAACATTATTCGGACAGATTGCAAGCAGATATACAAGATGTATCTAGCTTAAACAAGGAAGAACCGTATTCTAGTATGGATATAAATCTGCATAGGAATAAAAAGTTTGAAAAATCGATTGAAAACAAGGATAGAAGAAACACTATTACCAAAGACAATAACATAGAGTCTAACGGCATAAAGCAGTCTAACAATCAAGACAAAGAATTTACGTATTCTAGTTCAGGTTCAGGTTCAGGGTCGAAACAATCGAATACATACCATAAAAACGCAAGGAAATATCCATATAATGCTAGACATAATAGGGAGGAATACAATTACAAAGAAAGAAAACATAATTACCAAGGGCAGAATGGAACTTGGCAAGGTTGTACCATGGAAGACAAGCAGCAATCGGATAGAAACGAACAAACATGCAATCGAAAAGATTCTAATGAAGCTAAGCAAGATATTAGCGAAGAAACTGTGGTAAATAAAGCTGTGGTAAAAGGAACCAAAGAAAGAGCATACAATTATCAAGGACGGAACGGATTCAAAGAACACAGAAAAGGAGAGAAAACTGAAGCGTACAAAGAGAGGGATAGAAGCAAGAATAGTATATTCGACAATAAAGAAAAGGAAAATGAAAATTGGAGGAATAAGGGAGAAATCGGTGAAAAGTGCAGTGAAAAAGGCAGTATTCAAAAACGAATACAACATAGAAGATCTCCGCTCGATGACGACGCGAGTCAAAGGGAAAGACTAGCCGATCAATTAAACAGAGGACAGCTGGAATGTTTAGTATGTTGCGAGTGGATTAGACAGAACGATTATATTTGGTCGTGTTCTAATTGCTATCATGTTTTACACCTGAAGTGTGTGAAAAAATGGGCAAAATCTTCGCAAGCAGATAACGGTTGGAGATGTCCGGCATGTCAGAATGTAAGTATAACGATTCCCGACGAGTATTTCTGCTTCTGCGGTAAGACGAGAGCTCCAGAATGGAATCGTAGAGATGTTGCGCATTCTTGCGGAGAAGTTTGTGGCAGAACATTATCAAAAAATACTTGTCCTCACAAGTGTACTCTTCTCTGTCATCCTGGATCTTGTCCGCAATGCGTAGCAATGGTTACCAGATATTGTGGCTGTGGTAAAACATCGCAAACGGTACAATGTAGCGCGCACAAGCTATTGTTGTGCGACGATACGTGCGATAAGGATTTAAATTGTGGCACGCATAAATGCGAGAAAAAGTGTCATCACGGAGAATGTCAAAGTTGCGAAAAAACAGTTGAGCAAGAATGTTATTGTGGTAAAGACAAAAGAAAAATAACTTGTCAAAGTAATATTTCGCTTACGTACTCTTGCAAAAGCGTCTGCGGTAAATTATTAGATTGTGGTAATCATACGTGCGCCAAGCTTTGCCATCCAGGTGTCTGCGATCCATGTAGTTTGACCCCAGAGAAAGTGACGACGTGTTGCTGCGGACAAACACCGTTGACAGAGAAACGACAAACTTGTTTAGACCCAATTCCGGTTTGCGACAAAGTATGTTCGAAAAGTCTAAAATGTGGTCAACCGAATAATCCCCACATATGCAAAGCAACGTGTCACGAAGGTGATTGTCCTATTTGCGATTTAACTACAGACGTTAAGTGTCGTTGTGGAAACATGGACAGAGAAATAGCTTGTAAGGATTTAATATCAAAAGCTGACGATGCTCGATGTGAAAAACGATGCACAAAAAAACGATCCTGTGGCAAACATAAATGTAACCAGCTGTGTTGCATAGAAGTAGAACACGTTTGTCCTTTGATGTGTAGTAAAACTTTGAGCTGCGGTAAACACAAATGTGAACAAACTTGTCATAAAGGAAGGTGTCAACCTTGTTGGCGTAGCAGCTTTGAAGAATTATATTGCGAATGTGGAGCTGCCGTGATATATCCTCCAGTGCCCTGTGGTACTAGAAGACCCGTTTGCGATAGGTCTTGTTCTCGTCAGCATTCCTGTGGGCACGAGGTGTTTCATAATTGTCATAACGAGCCTACATGTCCTCCCTGTACCGTCCTTACGCAGAGGTGGTGTCACGGTAAACACGAGCTTCGTAAAGCTGTACCGTGTCACTTTAATGGAATTTCGTGCGGTTTACCGTGTAACAAGCCTATTTCTTGCGGTCGACACAAATGTCTTGCAATTTGTCATCCTGGTCAGTGTGAAAAACCTGGACAACAATGTTCCCAACCGTGTACTATTCCAAGAGAAATGTGTGGACACATTTGCGCCGCTCCGTGTCATGACGGCAAATGCCTAGACACGCCGTGCAAAGAAATGGTCAAGgtaacatgtcagtgcggacatagaactacatctcgtgcttgtgcagagaattcgaaagagtatcaaagaatagcgagcagcatattagctagtaaaatggctgatatgcaactaggtcattccgttgatttggaagaagtgtttggtcaaggtgcaaaaaaacagaatcagttgaaaacgctagaatgtaacgacgaatgcaaactgatagaacgaaatcgaagattagcactaggtttgcaaattgtaaacccggatttgagtggaaaattaatgcccagatatagtgaTTTCATGAAGCAGTGGGCTAAAAAGGATCCACTCTTTTGTCAAATGGTCCATGAAAAATTGACAGAATTAGTTCAATTGGCAAAGACCTCGAAGCAAAAATCGCGCAGTTATTCATTCGATAGCATGAACAAAGATAGACGTCATTTCATTCATGAATCCTGCGAGCATTTTGGATGTGAAAGTCAAGCATACGATCAGGAGCCTAAAAGAAATGTTGTTGCCACtgctgtgaaagataagTGTTGGTTGCCGAGCTATAGTTTATTAGAAATCGTGCAACGAAATAATGGTCAGAGAAAAGTTCCTGGTCCAATGTTGAATACTTCGAAAGCTAACGGATCTGTAAAGACGATATTGTCACTGCCTACGAAAAAGAACCAAAAAGTAGAAATACAGTCTAATACAAAAATGCCGGAACCAGAACCAGAACTAGAACCAGAAATAGACTACTTTGattacaaaggttaa
Protein Sequence: QVATVVKKESNLHATAREFVPNLNSKSANRRQDSQNMELPCSIDRCYTADCYTRDTKLTEEETTVDRYSTSIDNVNKCEQKQYENKRNYKLKEGQQDHQFYRKNRYTNSYHQRGRSSYKFQGNKYYTNKHYSDRLQADIQDVSSLNKEEPYSSMDINLHRNKKFEKSIENKDRRNTITKDNNIESNGIKQSNNQDKEFTYSSSGSGSGSKQSNTYHKNARKYPYNARHNREEYNYKERKHNYQGQNGTWQGCTMEDKQQSDRNEQTCNRKDSNEAKQDISEETVVNKAVVKGTKERAYNYQGRNGFKEHRKGEKTEAYKERDRSKNSIFDNKEKENENWRNKGEIGEKCSEKGSIQKRIQHRRSPLDDDASQRERLADQLNRGQLECLVCCEWIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVSITIPDEYFCFCGKTRAPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCVAMVTRYCGCGKTSQTVQCSAHKLLLCDDTCDKDLNCGTHKCEKKCHHGECQSCEKTVEQECYCGKDKRKITCQSNISLTYSCKSVCGKLLDCGNHTCAKLCHPGVCDPCSLTPEKVTTCCCGQTPLTEKRQTCLDPIPVCDKVCSKSLKCGQPNNPHICKATCHEGDCPICDLTTDVKCRCGNMDREIACKDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHVCPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCDRSCSRQHSCGHEVFHNCHNEPTCPPCTVLTQRWCHGKHELRKAVPCHFNGISCGLPCNKPISCGRHKCLAICHPGQCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPLFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRNNGQRKVPGPMLNTSKANGSVKTILSLPTKKNQKVEIQSNTKMPEPEPELEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: iTF_00863650;
80% Identity: -