Basic Information

Insect: Nomia melanderi
Gene Symbol: stc
Assembly: GCA_003710045.1
Location: NW:1599863-1607812[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.31 1.4e+03 -1.5 0.5 4 8 392 396 391 397 0.82

2 13 2 9.1e+03 -4.4 1.6 15 19 550 554 549 554 0.81

3 13 0.084 3.8e+02 0.3 0.4 4 10 583 589 582 589 0.95

4 13 2.1e-05 0.094 11.8 13.9 4 18 600 614 598 615 0.94

5 13 1.8e-07 0.00081 18.4 18.0 1 18 651 668 651 669 0.97

6 13 2.1e-08 9.7e-05 21.4 9.2 1 19 707 725 707 725 0.98

7 13 3.8e-07 0.0017 17.4 12.3 4 18 772 786 765 787 0.86

8 13 2 9.1e+03 -4.7 1.6 5 10 816 821 816 821 0.90

9 13 0.00058 2.7 7.2 8.4 1 11 827 837 827 838 0.97

10 13 1.2e-10 5.5e-07 28.5 14.3 1 19 854 872 854 872 0.98

11 13 2 9.1e+03 -5.3 7.7 10 19 919 929 911 929 0.81

12 13 4.6e-07 0.0021 17.1 13.6 1 16 965 980 965 991 0.85

13 13 2.6e-05 0.12 11.5 11.7 1 19 997 1016 997 1016 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.31	1.4e+03	-1.5	0.5	4	8	392	396	391	397	0.82
2	13	2	9.1e+03	-4.4	1.6	15	19	550	554	549	554	0.81
3	13	0.084	3.8e+02	0.3	0.4	4	10	583	589	582	589	0.95
4	13	2.1e-05	0.094	11.8	13.9	4	18	600	614	598	615	0.94
5	13	1.8e-07	0.00081	18.4	18.0	1	18	651	668	651	669	0.97
6	13	2.1e-08	9.7e-05	21.4	9.2	1	19	707	725	707	725	0.98
7	13	3.8e-07	0.0017	17.4	12.3	4	18	772	786	765	787	0.86
8	13	2	9.1e+03	-4.7	1.6	5	10	816	821	816	821	0.90
9	13	0.00058	2.7	7.2	8.4	1	11	827	837	827	838	0.97
10	13	1.2e-10	5.5e-07	28.5	14.3	1	19	854	872	854	872	0.98
11	13	2	9.1e+03	-5.3	7.7	10	19	919	929	911	929	0.81
12	13	4.6e-07	0.0021	17.1	13.6	1	16	965	980	965	991	0.85
13	13	2.6e-05	0.12	11.5	11.7	1	19	997	1016	997	1016	0.95

Sequence Information

Coding Sequence: ATGGCCACCTGGGATGGTTCGTATTCTGAACCAGATGATCAGCATTATTATTTGTACTCTGATCAAAATGTTCCTGCTTCCACAACAGGAAGCTGGACGTTTTTTCCTAATAATGTAAATAGTGATTATAGAAGAGAAAATCATGAATTTTATGTACAAAATGATTCTATGTACCAACAAAATTGTCCGAATACTTTGTATCATTCAAATGCAAATGTTATGCCCACTGTCTTGTCTACAAGTAATAGTTATCAGGAGCATTTGAGGAATACCATAGACAACTCTCAGACTCAGACTAACGTGAAACATTTCCCCAAGAATGTTAAACCACAAAATTGCTTTGTACCTACTGTCGATTATTGGAGTAGCGATTATAACACAAACACAAGTAACATTAAGCATAATTATGTAAAAGGTACGAAAGATGTTAGGTCTGTCGTAACAAAAGGGTCAAATTTACATGCTACGGCCCAAGAATTTATACCAAGTAATTCTAAAGTAATCaataagaaagaagaattgcaACATATGGATGTTATTTCTTCGAATAACCACATGGATTGTTGTACCAAAGACGCAAAGGTTACAGGAAAAGCACCAAATGTTGATAAGTATCCTAtcgataatttaaataaatgtgaaCAAAAGCATGAgagtaaaaagaatataaattataaggtTAAAGAGGGGCAACAAGatcaattttacaaaaaaaatcgGTATACAAGCTCTTATCATCAGAGAGGCAGAAgttcttataaatttcagggtaataaatattatactaataaGCATTACTCTGATAAATTGCAACCGGATACACAAGATTTAGTAAATTTAAACGAGGAAGAACCATGCTCAAGcatgaatacaaatttgtataaaagtagaaaatcATCAACTGAGAATAAAGATAGAAGAAGTGTTGTTACCAAAGACAATAACTTACAGTCTAATGGCATAAAGCAGTCTAATAATCAAGATAAAGAATTTACTTATTACGATTCAGGATCAAAGCCATTATATACTTACcataaaaatacaagaaaatatcCGTACAATGCTAGATATAACAAGGAAGATTATAGTTATAGAGAAAGAAGACACAATTATCAGGGGTACAATGAAAGTTGGCAGAATTATGGCTCAGAAGATAAACAGGATAGAAATGAACACACGTGCAATCGTAAAGATTCTAATGAAACTAGACAAGGTTTTAGCGAAGAGGCTACAGTAGGAATAAAGGAAACTAAAGACAGAGGATATAATTATCAGGGACGTAATGGGTTCAGAGAACCTAAGAAAGGAGATAAAACTGAAACATTCAAGGAGAAGGATAGAAACAGAAGTAATACGTTTGATAATAAAGAGAAGGCAAATGAGAATTGGAggaataaaagagaaattaatgaaaagaatagTATTCAGAAACgagtacaaaataaaaagagcCCACTtgATGACGATGCAAGTCAAAGGGAAAGATTGACCGATCAGTTAAACAGGGGACAATTAGAATGTTTAGTATGTTGCGAATCTATCAGACAGAATGATTACATTTGGTCATGTTCTAATTGTTATCATGTTCTACATTTGAAGTGTGTTAAAAAATGGGCAAAATCTTCGCAAGCAGATAACGGTTGGAGATGTCCAGCATGTCAGAATGTAAGCTTAACAATACCTGACGATTACTTCTGTTTTTGTGGAAAGACAAAAACCCCTGAATGGAATCGTAGAGACGTTGCACATTCTTGCGGAGAAGTCTGCGGTAGAACGTTATCGAAGAATACTTGTCCCCACAAATGTACTCTTCTGTGTCATCCTGGATCTTGTCCCCAATGCGTAGCAATGGTAACAAGGTATTGCGGCTGTGGTAAAACATCGCAAACAGTACAATGTAGCACACACAAGTTATTGTTGTGCGATGCTACATGCGATAAGGATCTAAATTGCGGCACTCATAAATGTGAAAACAAATGTCATCACGGAGAATGCCCAAGTTGCGAGAAGACAATTGAACAAAaGTGTTATTGCGGTAAAAACAAGAGGGAGATAATTTGTCAGAATAATGTTTCGCTTACGTATTCTTGTGGAAATATTTGCGGTAAACTATTAGACTGTGGTAATCACACTTGCGCAAAGTTGTGTCATCTGGATGCCTGTGAACCTTGTAGTTTGAACCCGGAGAAAGTTACAACCTGTTGTTGTGGACAGACACCGTTGACAGAAGAAAGACAAACTTGTTTAGACCCAATTCCAGTTTGCGATAAAATATGTTCTAAAAATCTGAAATGTGGTCAACCTAATAATCCTCACACCTGCAAAGCCAAATGTCACGAAGGAGATTGCCCTGTTTGCGATTTGACCACAGATGTTAAGTGTCGTTGCGGAAACATGGATAGAGAAATTGCTTGTAAAGACTTAGTATCGAAAGCCGACGATGCTCGATGTGAAAAACGGTGCACAAAGAAAAGGTCTTGCGGCAAGCATAAGTGTAATCAGTTGTGCTGCATAGAAGTAGAACATATTTGTCCTTTGATGTGTTCTAAAACTTTAAGCTGTGGCAAACATAAATGTGAACAAACTTGTCATAAAGGACGGTGTCAACCTTGTTGGCGTAGTAGCTTTGAAGAATTATATTGCGAATGTGGAGCTGCTGTAATATATCCTCCGGTTCCTTGCGGTACTAGGAGACCTATTTGCGACAGACCTTGTTCTCGTCAGCATCCCTGTGGACACGAAGTGTTCCATAATTGCCACAATGAGTCTACGTGTCCCCCTTGTACCGTTCTCACTCAGAGGTGGTGTCATGGTAAACATGAACTTCGTAAAGCTGTGCCGTGTTACGTCGATGAAATTTCATGCGGTTTGCCATGTAATAAACCTATTTCTTGCGGACGGCACAAGTGTATCACTATTTGTCATCCTGGACCATGCGAGAGACCTGGACAACAATGTACTCAGCCGTGTACTACACCGAGAGAAATGTGTGGACATGTCTGCGCTGCCCCGTGTCACGACGGTAAATGTCTAGATACACCGTGCAAGGAAATGGTAAAGGTAACATGTCAATGTGGGCATAGAACAACGTCCCGTGCTTGTGCAGAAAATTCTAAAGAATATCAAAGAATAGCGAGTAGCATACTAGCTAGTAAAATGGCTGACATGCAACTAGGTCATTCAGTTAATTTGGAGGAAGTGTTCGGTCAAGGAGCGAAAAAACAGAATCAGTTGAAAACTTTGGAATGTAACGACGAGTGCAGATTAAtcgaacgaaataaaagattaGCGTTAGGCTTGCAAATTGTAAACCCGGATTTAAGCGGAAAATTAATGCCTAGATACAGCGATTTCATGAAACAATGGGCTAAGaaagatccacatttttgTCAGATGGTTCACGAGAAGCTGACTGAATTGGTTCAACTAGCAAAGACTTCGAAACAGAAATCACGTAGTTATTCGTTTGAAAGTATGAATAAAGATAAACGTCATTTCATTCACGAATCTTGTGAGTATTTTGGTTGCGAAAGTCAAGCGTACGATCAAGAGCCTAAGAGAAACGTTGTTGCTACTGCTGTAAAGGACAAGtGCTGGTTGCCGAGCTACAgtttattagaaattgtaCAACGAAAAAATGGTCAGAGAAAAGTTCCAGGTCCGATGTTGAACACTTCAAAAGTCGATGGATCCGTAAAGACGATATTATCACTGCCCGCCAAAAAGAATCAAAAAATGGAAACACAGCCGAATATAAAGGTGCCAGAACCTGAAATAGACTACTTTGATTATcaaggttaa
Protein Sequence: MATWDGSYSEPDDQHYYLYSDQNVPASTTGSWTFFPNNVNSDYRRENHEFYVQNDSMYQQNCPNTLYHSNANVMPTVLSTSNSYQEHLRNTIDNSQTQTNVKHFPKNVKPQNCFVPTVDYWSSDYNTNTSNIKHNYVKGTKDVRSVVTKGSNLHATAQEFIPSNSKVINKKEELQHMDVISSNNHMDCCTKDAKVTGKAPNVDKYPIDNLNKCEQKHESKKNINYKVKEGQQDQFYKKNRYTSSYHQRGRSSYKFQGNKYYTNKHYSDKLQPDTQDLVNLNEEEPCSSMNTNLYKSRKSSTENKDRRSVVTKDNNLQSNGIKQSNNQDKEFTYYDSGSKPLYTYHKNTRKYPYNARYNKEDYSYRERRHNYQGYNESWQNYGSEDKQDRNEHTCNRKDSNETRQGFSEEATVGIKETKDRGYNYQGRNGFREPKKGDKTETFKEKDRNRSNTFDNKEKANENWRNKREINEKNSIQKRVQNKKSPLDDDASQRERLTDQLNRGQLECLVCCESIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVSLTIPDDYFCFCGKTKTPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCVAMVTRYCGCGKTSQTVQCSTHKLLLCDATCDKDLNCGTHKCENKCHHGECPSCEKTIEQKCYCGKNKREIICQNNVSLTYSCGNICGKLLDCGNHTCAKLCHLDACEPCSLNPEKVTTCCCGQTPLTEERQTCLDPIPVCDKICSKNLKCGQPNNPHTCKAKCHEGDCPVCDLTTDVKCRCGNMDREIACKDLVSKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHICPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPICDRPCSRQHPCGHEVFHNCHNESTCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITICHPGPCERPGQQCTQPCTTPREMCGHVCAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVNLEEVFGQGAKKQNQLKTLECNDECRLIERNKRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFESMNKDKRHFIHESCEYFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRKNGQRKVPGPMLNTSKVDGSVKTILSLPAKKNQKMETQPNIKVPEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: -
80% Identity: -