Basic Information

Insect: Augochlorella aurata
Gene Symbol: stc_1
Assembly: GCA_028455555.1
Location: CM052158.1:12976384-12981247[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.7e+04 -4.4 1.6 15 19 549 553 548 553 0.81

2 13 0.084 7e+02 0.3 0.4 4 10 582 588 581 588 0.95

3 13 1.6e-05 0.14 12.1 13.4 4 18 599 613 597 614 0.95

4 13 4.7e-07 0.0039 17.1 17.6 1 18 650 667 650 668 0.97

5 13 0.69 5.8e+03 -2.6 0.8 6 10 696 700 695 700 0.90

6 13 1.6e-10 1.4e-06 28.1 12.7 1 19 706 724 706 724 0.98

7 13 9.3e-06 0.078 12.9 12.0 4 18 771 785 764 786 0.86

8 13 2 1.7e+04 -4.7 1.6 5 10 815 820 815 820 0.90

9 13 0.00058 4.9 7.2 8.4 1 11 826 836 826 837 0.97

10 13 1.2e-10 1e-06 28.5 14.3 1 19 853 871 853 871 0.98

11 13 2 1.7e+04 -7.8 4.4 10 11 918 919 916 927 0.48

12 13 2.3e-07 0.0019 18.1 12.8 1 16 964 979 964 990 0.85

13 13 7.4e-05 0.62 10.1 9.7 1 15 996 1009 996 1015 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.7e+04	-4.4	1.6	15	19	549	553	548	553	0.81
2	13	0.084	7e+02	0.3	0.4	4	10	582	588	581	588	0.95
3	13	1.6e-05	0.14	12.1	13.4	4	18	599	613	597	614	0.95
4	13	4.7e-07	0.0039	17.1	17.6	1	18	650	667	650	668	0.97
5	13	0.69	5.8e+03	-2.6	0.8	6	10	696	700	695	700	0.90
6	13	1.6e-10	1.4e-06	28.1	12.7	1	19	706	724	706	724	0.98
7	13	9.3e-06	0.078	12.9	12.0	4	18	771	785	764	786	0.86
8	13	2	1.7e+04	-4.7	1.6	5	10	815	820	815	820	0.90
9	13	0.00058	4.9	7.2	8.4	1	11	826	836	826	837	0.97
10	13	1.2e-10	1e-06	28.5	14.3	1	19	853	871	853	871	0.98
11	13	2	1.7e+04	-7.8	4.4	10	11	918	919	916	927	0.48
12	13	2.3e-07	0.0019	18.1	12.8	1	16	964	979	964	990	0.85
13	13	7.4e-05	0.62	10.1	9.7	1	15	996	1009	996	1015	0.93

Sequence Information

Coding Sequence: ATGGCTACGTGGGATGGTTCGTGTTCGGAGCCGGACGATCAACATTATTATTTATACTCCGATCAAAATGTTGCTGCTTCTACAACCAGAAACTGGACGTTTTTTCCTAATAATGTGAGTAACGATTATACACGAGAAAATCGTGATTTTTATGTCCAAAATGATTCTGTGTTCCATCAAAATTGTCCAACTACTTTGTATCACGTAAATACAAATGTAATGCCCAACATTGTGTCGAGTGGTAATAGTTATCAGGAAGATTTAAGAAATACCATTGATAACACGGAAACACCAACTAATGTACAATGCTTATCAAAAGATGTTATGCCCCAAAATTACTTTGTACCCACTGCTGATTATTGGAGGAACGATTACGACGCGAATGTACCTAAGATTAAACAGAGTTATATGGAAGAAATGAAACAAGTTGCAACTACTGTGACAAGAGACTCAAATTTACATGCTACAGCTCGAGAATTTGTGCCAAATCTAAATGCCAAATCTGCTAATAAAAAATTTGAATCCCAAAATATGGGAGTTCCGTGTTGTATCAATTCTTATACCAAAGATACAAAGCTTACGGAAGAAGAAATAATGATTAATAAACATTCCGTTGATGATGTAAATAAATATGAGCAAAAACAATATGAAAACAAAAGGAATTATAAGATCAAAGAAGGACAACAAGATCGATCTTATAAAAGAAATAGATATACCAGCTCTTATCATCAGAGGGGCAGAAGTACTTACAAGTTTCAAGGTAATAAATATTATGCTAATAAGCATTGCTCTGACAAATTGCAAACGAATGTACAAGATACATCAAGTTTAAGCAAGGAAGAACCATGTCCCAGTGTAGACACAAATCTGCATAAAAATAAAAAATTACCAATTGAAAACAGAGATAAAAGAAACGCTATTAGCAAAGACAATAATGTGCAGTCGAACGGCATTAAACAATCTAATAACGATGACAAAGAATTTATGCACACTAATATAGGTTCGAAACAATTGAATGCGTACCATAAGAACATAAGGAAATATCCGTACAATACTAGACATAGTAGGGAAGAATATGGTTACAGAGAAAGAAGACATAATTACCAAGGGCAAAATGAAACTTGGCAAGGTGGTAGTACAGAAGATAAATATCCAGATAGGAATGGGCAATTATGCATTTACAAAGATCCTAATGAAACTAGCCAAGATACTAGCGAAGAAACTAATAAAATTGGAATAAAAGAAACTAAAGAAAAAGGGTACATTTATCAAGGACGTAATGGATTTAAAGAACACAGAAAAGGTGATAAAACTGAAACATTCAAAGAAAGGGATAGAAATAAAAATAATATATTCGATAATAAAGAAAAGGGAAATGAAAATTGGAGAAATAAAGCAGAAATCACTGAAAAGGGCAGTTTTCAAAAACGAATACAAAATAGAAAACCTCTACTTGATGATGACGCGAGCCAAAAAGAAAGACTGACCGATCAATTGAATAGAGGACAATTAGAATGTTTAGTGTGTTGCGAGTATATTAGGCAGAATGATTATATTTGGTCGTGTTCTAATTGTTATCATGTTTTACATCTGAAATGTGTAAAAAAGTGGGCAAAATCTTCGCAAGCAGAGAATGGTTGGAGATGTCCGGCGTGTCAAAACGTAAGTATGACAATACCCGATGAGTATTTCTGCTTCTGTGGCAAGACAAGGGCGCCGGAATGGAATCGTAGAGATATTGCACATTCTTGCGGAGAAGTTTGCGGTAGAACATTATCAAAAAATACATGTCCACACAAATGCACTCTTCTCTGTCATCCTGGATCTTGTCCGCAATGCATAGCAATGGTAACAAGATACTGTGGTTGTGGTAAAACATCACGAACGGTACAATGTTGCTCGCACAAGTTATTGTTATGCGATGCTACATGCGATAAAGATTTAAGTTGTGGTATGCATAAATGCGGAAGGAAGTGTCATCACGGAGAATGTCCAAGTTGTGAGAAGACGGTTGAACAAGAATGTTATTGTGGTAAAGACAAAAGAATAATTATTTGTCAAAATAATATTACGCTTACATACTCTTGCGAAAGTGTTTGCGGTAAATTATTAGACTGCGGTAATCACACGTGTATAAAGCTGTGTCATCCAGGTGCTTGCGAGCCATGTAGTCTGACCCCAGAAAAAGTGACAACCTGTTGCTGTGGGCAAACACTGTTGACAGATAAAAGACAAACTTGTTTGGACCCAATTCCGATTTGTGACAAAGTATGTTCGAAAAATCTAAAATGTGGTCAACCGAACAAACCTCATGTATGTAAAGCAAAATGTCACAAAGGAGATTGTCCTGTTTGTGATTTAACTACAGACGTCAAATGTCGTTGCGGAAACATGGATAGAGAAGTAGCTTGTAAAGATTTAATATCGAAAGCTGACGATGCTCGATGTGAAAAAAGATGTACAAAAAAAAGATCTTGCGGCAAGCATAAATGTAATCAGTTGTGTTGCATAGAAATAGAACATGTTTGTCCTTTGATGTGTTCTAAAACTTTGAGCTGTGGTAAACATAAATGTGAACAAACTTGTCATAAAGGAAGATGCCAACCTTGTTGGCGTAGTAGTTTCGATGAATTGTATTGCGAGTGTGGAGCTGCTGTAATATATCCTCCAGTTCCCTGCGGTACCAGGAGACCTGTTTGCGATAGGCCTTGTTCTCGTCGGCATTCCTGTGGACACGAAGTGTTTCACAATTGTCATAACGAGCCTACGTGTCCTCTTTGCACTGTTCTTACTCAAAGGTGGTGTCACGGCAAACACGAGCTTCGTAAAGCTGTACCGTGTTACGTTAATGAAATTTCATGCGGTTTGCCATGTAATAAGCCTATTTCTTGTGGTCGACACAAATGTCTCGCTATTTGCCATCCTGGGCCGTGCGAGAAACCTGGACAACAATGTTCTCAACCGTGTACCATTCCAAGAGAAATGTGTGGACACATTTGTGCCGCTCCATGCCACGACGGTAAATGCCTAGACACACTGTGCAAAGAAATGGTGAAGataacatgccaatgcggacatagaactacttctcgtacttgtgcagataattcgaaagaatatcaaaggatagcgagtagcatattggctagtaaaatggctgacatgcaactaggtcattcggtcgatttggaagaggtgtttggtcagggtgcgaaaaaacagaatcaactgaaaacattagaatgtaacgacgaatgtaggctgatagaacgaaatcgtagattagcattaggtttgcaaatagtaaacccagatttgagcggaaaattaatgccacgatacagtgaTTTCATGAAACAATGGGCCAAGAAAGATTCACCCTTTTGTCAAATGGTTCATGAAAAGTTAACCGAGTTGGTTCACTTAGCAAAGACTTCGAAACAGAAATCTCGTAGTTATTCGTTCGATAGTATGAATAAAGACAGACGTCATTTCATTCACGAGTCCTGCGAGCACTTTGGTTGTGAAAGTCAAGCATATGATCAGGAGCCTAAAAGAAATGTTGTTGCTACTGCTGTAAAAGACAAGTGTTGGTTGCCAAGCTATAGTTTATTGGAAATCGTGCAACGAGAAAACGGTCAAAGAAAAGTTCCTGGTCCGATGATGTTGAATACTCCAAGATCGGATGGATCTGTAAGGACGATATTATCACTGCCTACAAAAAAGAACCACAAAATGGAGATACAGTCAAATACAAAAATGCCAGAGGCAGAACCAGAAATAGATTACTACAAAGGCTAA
Protein Sequence: MATWDGSCSEPDDQHYYLYSDQNVAASTTRNWTFFPNNVSNDYTRENRDFYVQNDSVFHQNCPTTLYHVNTNVMPNIVSSGNSYQEDLRNTIDNTETPTNVQCLSKDVMPQNYFVPTADYWRNDYDANVPKIKQSYMEEMKQVATTVTRDSNLHATAREFVPNLNAKSANKKFESQNMGVPCCINSYTKDTKLTEEEIMINKHSVDDVNKYEQKQYENKRNYKIKEGQQDRSYKRNRYTSSYHQRGRSTYKFQGNKYYANKHCSDKLQTNVQDTSSLSKEEPCPSVDTNLHKNKKLPIENRDKRNAISKDNNVQSNGIKQSNNDDKEFMHTNIGSKQLNAYHKNIRKYPYNTRHSREEYGYRERRHNYQGQNETWQGGSTEDKYPDRNGQLCIYKDPNETSQDTSEETNKIGIKETKEKGYIYQGRNGFKEHRKGDKTETFKERDRNKNNIFDNKEKGNENWRNKAEITEKGSFQKRIQNRKPLLDDDASQKERLTDQLNRGQLECLVCCEYIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQAENGWRCPACQNVSMTIPDEYFCFCGKTRAPEWNRRDIAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCIAMVTRYCGCGKTSRTVQCCSHKLLLCDATCDKDLSCGMHKCGRKCHHGECPSCEKTVEQECYCGKDKRIIICQNNITLTYSCESVCGKLLDCGNHTCIKLCHPGACEPCSLTPEKVTTCCCGQTLLTDKRQTCLDPIPICDKVCSKNLKCGQPNKPHVCKAKCHKGDCPVCDLTTDVKCRCGNMDREVACKDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEIEHVCPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFDELYCECGAAVIYPPVPCGTRRPVCDRPCSRRHSCGHEVFHNCHNEPTCPLCTVLTQRWCHGKHELRKAVPCYVNEISCGLPCNKPISCGRHKCLAICHPGPCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTLCKEMVKITCQCGHRTTSRTCADNSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECRLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDSPFCQMVHEKLTELVHLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMMLNTPRSDGSVRTILSLPTKKNHKMEIQSNTKMPEAEPEIDYYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: iTF_00183646;
80% Identity: -