Basic Information

Insect: Lasioglossum leucozonium
Gene Symbol: stc
Assembly: GCA_028454225.1
Location: CM052206.1:17839-22642[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.8e+04 -4.4 1.6 15 19 544 548 543 548 0.81

2 13 0.084 7.5e+02 0.3 0.4 4 10 577 583 576 583 0.95

3 13 2.1e-05 0.19 11.8 13.9 4 18 594 608 592 609 0.94

4 13 6.6e-06 0.06 13.4 16.5 1 18 645 662 645 663 0.91

5 13 1.4 1.2e+04 -3.6 0.8 6 10 691 695 690 695 0.88

6 13 4.9e-09 4.4e-05 23.4 11.1 1 19 701 719 701 719 0.98

7 13 1.1e-05 0.1 12.6 11.3 4 18 766 780 759 781 0.86

8 13 2 1.8e+04 -4.7 1.6 5 10 810 815 810 815 0.90

9 13 0.00058 5.3 7.2 8.4 1 11 821 831 821 832 0.97

10 13 1.2e-10 1.1e-06 28.5 14.3 1 19 848 866 848 866 0.98

11 13 2 1.8e+04 -6.4 8.5 10 19 913 923 905 923 0.77

12 13 1.1e-06 0.0097 15.9 13.6 1 16 959 974 959 985 0.85

13 13 2.5e-05 0.22 11.6 11.2 1 19 991 1010 991 1010 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.8e+04	-4.4	1.6	15	19	544	548	543	548	0.81
2	13	0.084	7.5e+02	0.3	0.4	4	10	577	583	576	583	0.95
3	13	2.1e-05	0.19	11.8	13.9	4	18	594	608	592	609	0.94
4	13	6.6e-06	0.06	13.4	16.5	1	18	645	662	645	663	0.91
5	13	1.4	1.2e+04	-3.6	0.8	6	10	691	695	690	695	0.88
6	13	4.9e-09	4.4e-05	23.4	11.1	1	19	701	719	701	719	0.98
7	13	1.1e-05	0.1	12.6	11.3	4	18	766	780	759	781	0.86
8	13	2	1.8e+04	-4.7	1.6	5	10	810	815	810	815	0.90
9	13	0.00058	5.3	7.2	8.4	1	11	821	831	821	832	0.97
10	13	1.2e-10	1.1e-06	28.5	14.3	1	19	848	866	848	866	0.98
11	13	2	1.8e+04	-6.4	8.5	10	19	913	923	905	923	0.77
12	13	1.1e-06	0.0097	15.9	13.6	1	16	959	974	959	985	0.85
13	13	2.5e-05	0.22	11.6	11.2	1	19	991	1010	991	1010	0.95

Sequence Information

Coding Sequence: ATGGCTACATGGGATGGTTCGTATTCTGAGCCGGACGATCAACGTTTTTATTTGTACTCTGATCAAAATGTTGCTGCTTCTACAACCGAAAACTGGACATTTTTTCCTAACGATGTAAGTAATGATTATACACGAGAAAATCGAGAATTTTATGTGCAAAATGATTCTGTGTTTCATCAAAATTGTCCAAGTACTTTATATCATTCAAACACAAATATAATGCCCAACATTGTGACAAGTGGTCGTAGTTATCAGGAACATTTAAGAAATACCTTAGATAATTCACAAACATCTAATATGCAACACTTGCCAAAAAGTGTGAAACCAGAAAATTGCTTTGTACCTGCTGTCGATTATTGGAGTAACGATTACGATGCAAATGCGATCAAGATTAAGCATAGTTGTGCAACCATTGTGAAAAAAGAGTCAAACTTACATGCTACAGCTCGAGAATTCATACCGAATCTAAATTCCAAGTCTGTTAATAAAAAACAGGAATTGCAAAATATGGAACTTCCTTGTTCTATTAACAATATTGGCTGTTATTCGAGAGATACAAAACTTACAGAAGAAGAAACAACTGTCGATAGATATTCCGTTGACAATGTAAATAAATGCGAACAAAAACAATACGAGAACAAAAGGAATTATAAGATCAAAGAAGGACAACAAGATCAATTTTATAAAAAAAATAGATATACCAACTCGTATCATCAGAGAGGCAAAAGTTCTTACAAGTTCCAAGGTAATAAATATTATACTAATAAACATTATTCCGATAGATTGCAAACAGATATACAAGACTTATCAAGCTTAAACAAGGAAGAACCATATTCTGGTATGGATACAAATTTACATAGGAATAAAAAGTTATCAATTGAAAACAGGGATAAAAGAAGCACTATTACCAAAGACAATAATGTAGAGTCTAACGGCATAAAGCAGTCTAATAATCACGACAAAGAATTTACATATTCTAATTCAGGGTCGAAACAATCAAATACATACCATAAAAACACAAGGAAATATCCATATAATACTAGACATAATAGGGAAGAATACAATTATAAAGAAAGAAGACATAATTACCAAGGGCAAAATGGAACTTGGCAAGGTTGTACCATGGAAGACAAGCAATTGGATAGAAACGAACAAACATGCAATCGAAAAGATCCTAATGAAACTAAGCAAGATCTTAGCGAAGAAACTAATAAAATTGGAGTGAAAGAAACCGAAGAAAGAGGATACAATTACCAAGGACGCAATGGGTTCAAAGAACATAGAAAAGGAGACAAAACTGAAGCATACAAAGAGAAAGAGAAAAGCAAAAATAATATATTCGATAACAAAGAAAAGGAAAATGAAAATTGGAGGAATAAGGGAGAAATTAGTGAAAAAAGCAGTATTCACAAACGAATACAAAATAGAAGATCTCCGCTTGACGACGACGCGAGTCAAAGGGAAAGGCTGACCGATCAATTAAACAGAGGACAATTGGAATGTTTAGTGTGTTGCGAGTGGATTAGGCAGAACGATTATATTTGGTCATGTTCTAATTGCTATCATGTTTTACATCTGAAATGTGTGAAAAAATGGGCAAAATCTTCGCAAGCGGATAATGGTTGGAGATGTCCAGCATGTCAGAATGTAAGTATAACAATTCCCGATGAGTATTTCTGCTTCTGCGGCAAGACAAGAGCTCCAGAATGGAATCGTAGAGATGTTGCGCATTCTTGCGGAGAAGTTTGCGGTAGAACATTATCAAAAAATACTTGTCCTCACAAGTGTACTCTTCTCTGTCATCCTGGATCTTGTCCCCAATGCGTAGCAATGGTTACAAGGTATTGTGGCTGCGGTAAAACATCGCAAACAGTACAATGTAGTGCACACAAGCTATTGTTGTGCGATGCTACATGCGATAAGGGTTTAAATTGTGACACGCATAAATGCGAAAAAAAGTGTCATCACGGAGAATGTCCAAGTTGTGAGAAAACAGTTGAGCAAGAATGTTATTGCGGTAAAGACAAGAGAAAAATAACTTGTCAAAGTAATATTTCACTTACATATTCTTGCAAAAGTGTTTGTGGTAAACTATTAGATTGTGGTAATCATATGTGCGCAAAGCTGTGCCATCCAGGTGTTTGTGATCCATGTAGTTTGACTCCAGAGAAAGTGACGACCTGCTGCTGTGGCCAAACACCATTGGCAGAGAAACGTCAAGCTTGTTTAGACCCAATTCCGGTTTGCGACAAAGTATGTTCGAAAAGTCTAAAATGTGGTCAACCAAATAATCCTCATGTATGCAAAGCAACATGTCACGAAGGGGATTGTCCTATTTGTGATTTAACTACAGATGTTAAGTGTCGTTGCGGAAACATGGATAGAGAAATAGCTTGTAAGGATTTAATGTCAAAAGCTGACGATGCTCGATGTGAAAAAAGATGCACAAAAAAAAGATCTTGCGGCAAGCACAAATGTAACCAGTTGTGTTGCATAGAAGTAGAACACGTTTGTCCTTTGATGTGTTCTAAAACTTTGAGCTGTGGCAAACACAAATGCGAACAAACTTGTCATAAAGGAAGATGTCAACCTTGTTGGCGTAGTAGCTTCGAAGAATTATATTGCGAATGTGGAGCTGCTGTGATATATCCTCCAGTACCCTGTGGTACTAGGAGACCCGTTTGCGATAGGCCTTGTTCTCGTCAGCATTTCTGCGGGCACGAAGTGTTTCATAATTGTCATAACGAACCTACATGTCCTCCCTGCACCGTCCTTACACAGAGATGGTGTCATGGCAAACACGAGCTTCGTAAAGCTGTACCGTGTCACTTTAATGGAATTTCGTGCGGTTTGCCATGTAACAAGCCTATTTCCTGCGGTCGACATAAATGTCTCACAATTTGTCATCCTGGCCCATGCGAAAAACCTGGACAACAATGTTCTCAACCATGTACTATTCCAAGAGAAATGTGTGGACATATTTGCGCCGCTCCGTGTCACGACGGTAAATGCCTAGATACGCCGTGCAAAGAAATGGTGAAGgtaacgtgccagtgcgggcatagaactacatctcgtgcttgtgccgagaattcgaaagagtatcaaagaatagcgagcagtatattagctagtaaaatggctgatatgcaactaggtcattctgttgatttggaagaggttttcggtcaaggagcaaaaaaacagaatcagttgaaaacattagaatgtaatgacgaatgcaggttgatagaacgaaatcgaagattagcactaggtttgcaaattgtaaacccggatttaagtggaaaattaatgcccagatacagtgaTTTCATGAAGCAATGGGCTAAAAAAGACCCACTCTTTTGTCAAATGGTCCATGAGAAATTGACAGAATTGGTTCAATTAGCAAAGACCTCGAAGCAAAAATCACGCAGTTATTCGTTTGATAGCATGAATAAAGATAAACGTCATTTTATTCATGAATCCTGCGAGCATTTTGGATGTGAAAGTCAAGCATACGATCAGGAGCCTAAAAGAAATGTTGTTGCTACTGCTGTAAAAGATAAGTGTTGGTTGCCAAGCTATAGTTTATTAGAAATTGTGCAACGAAAAAATGGTCAGAGAAAAGTTCCTGGTCCAATGTTGAATACTTCAAAAGCTAACGGATCTGTAAAGACGATATTGTCACTGCCTACAAAAAAGAACCAAAAAGTAGAAATACAGTCAAATAAAAGAATGCCGGAACCAGAAccagaaccagaaatagactactttgattacaaaggttaa
Protein Sequence: MATWDGSYSEPDDQRFYLYSDQNVAASTTENWTFFPNDVSNDYTRENREFYVQNDSVFHQNCPSTLYHSNTNIMPNIVTSGRSYQEHLRNTLDNSQTSNMQHLPKSVKPENCFVPAVDYWSNDYDANAIKIKHSCATIVKKESNLHATAREFIPNLNSKSVNKKQELQNMELPCSINNIGCYSRDTKLTEEETTVDRYSVDNVNKCEQKQYENKRNYKIKEGQQDQFYKKNRYTNSYHQRGKSSYKFQGNKYYTNKHYSDRLQTDIQDLSSLNKEEPYSGMDTNLHRNKKLSIENRDKRSTITKDNNVESNGIKQSNNHDKEFTYSNSGSKQSNTYHKNTRKYPYNTRHNREEYNYKERRHNYQGQNGTWQGCTMEDKQLDRNEQTCNRKDPNETKQDLSEETNKIGVKETEERGYNYQGRNGFKEHRKGDKTEAYKEKEKSKNNIFDNKEKENENWRNKGEISEKSSIHKRIQNRRSPLDDDASQRERLTDQLNRGQLECLVCCEWIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVSITIPDEYFCFCGKTRAPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCVAMVTRYCGCGKTSQTVQCSAHKLLLCDATCDKGLNCDTHKCEKKCHHGECPSCEKTVEQECYCGKDKRKITCQSNISLTYSCKSVCGKLLDCGNHMCAKLCHPGVCDPCSLTPEKVTTCCCGQTPLAEKRQACLDPIPVCDKVCSKSLKCGQPNNPHVCKATCHEGDCPICDLTTDVKCRCGNMDREIACKDLMSKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHVCPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCDRPCSRQHFCGHEVFHNCHNEPTCPPCTVLTQRWCHGKHELRKAVPCHFNGISCGLPCNKPISCGRHKCLTICHPGPCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECRLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPLFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRKNGQRKVPGPMLNTSKANGSVKTILSLPTKKNQKVEIQSNKRMPEPEPEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: iTF_00863650;
80% Identity: -