Basic Information

Insect: Lasioglossum calceatum
Gene Symbol: stc_1
Assembly: GCA_963966675.1
Location: OZ016543.1:2878588-2883288[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.8e+04 -4.4 1.6 15 19 555 559 554 559 0.81

2 13 0.084 1.2e+03 0.3 0.4 4 10 588 594 587 594 0.95

3 13 1.7e-05 0.23 12.1 13.4 4 18 605 619 603 620 0.95

4 13 2.4e-07 0.0033 18.0 17.8 1 18 656 673 656 674 0.97

5 13 1.4 1.9e+04 -3.6 0.5 6 10 702 706 701 706 0.88

6 13 5.1e-08 0.0007 20.2 11.2 1 19 712 730 712 730 0.98

7 13 1.3e-05 0.17 12.5 11.1 4 18 777 791 770 792 0.86

8 13 2 2.8e+04 -4.7 1.6 5 10 821 826 821 826 0.90

9 13 0.00059 8.1 7.2 8.4 1 11 832 842 832 843 0.97

10 13 1.2e-10 1.7e-06 28.5 14.3 1 19 859 877 859 877 0.98

11 13 2 2.8e+04 -6.7 8.9 10 19 924 934 913 934 0.77

12 13 6.3e-07 0.0087 16.7 12.6 1 16 970 985 970 996 0.85

13 13 2.5e-05 0.34 11.6 11.2 1 19 1002 1021 1002 1021 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.8e+04	-4.4	1.6	15	19	555	559	554	559	0.81
2	13	0.084	1.2e+03	0.3	0.4	4	10	588	594	587	594	0.95
3	13	1.7e-05	0.23	12.1	13.4	4	18	605	619	603	620	0.95
4	13	2.4e-07	0.0033	18.0	17.8	1	18	656	673	656	674	0.97
5	13	1.4	1.9e+04	-3.6	0.5	6	10	702	706	701	706	0.88
6	13	5.1e-08	0.0007	20.2	11.2	1	19	712	730	712	730	0.98
7	13	1.3e-05	0.17	12.5	11.1	4	18	777	791	770	792	0.86
8	13	2	2.8e+04	-4.7	1.6	5	10	821	826	821	826	0.90
9	13	0.00059	8.1	7.2	8.4	1	11	832	842	832	843	0.97
10	13	1.2e-10	1.7e-06	28.5	14.3	1	19	859	877	859	877	0.98
11	13	2	2.8e+04	-6.7	8.9	10	19	924	934	913	934	0.77
12	13	6.3e-07	0.0087	16.7	12.6	1	16	970	985	970	996	0.85
13	13	2.5e-05	0.34	11.6	11.2	1	19	1002	1021	1002	1021	0.95

Sequence Information

Coding Sequence: ATGGCTACATGGGATGGTTCGTATTCTGAGCCGGACgatcaacatttttatttgtactCTGATCAAAATGTTGCTGCTTCTACAACCGGAAGCTGGACATTTTTTCCTAACGATGTAAGTAACGATTATACACGAGAAAATCGAGAACTTTATGTGCAAAATGATTCTGTGTTCCATCAAAATTGTCCAAGTACTTTATATCATTCGAATACGAATGTAATGCCCAACATTGTGACAAGTGGTCGTAGTTATCAGGAACATTTAAGAAACGCCTCAGATAATTCGCAAACATTGACTAATATGCAACACTTgccaaaaaatttgaaactaGAAAATTGCTTTGTACCTGCTGTCGATTATTGGAGCAACGATTACGATGCAAATGAGACTAAGACTAAGCATAGTTATGCAAAAGGAATGAAACAAGTTGCAACCAGTGTGAAAAAAGAGTCAAACTTACATGCTACAGCTCGAGAATTTGTACCGAATCTAAATTCCAAGTCTGCTAATAAAAGACAGGAATCGCAAAATATGGAACTTCCTTGTTCCATCGACTGTGTCGACCATTACGCCAGAGATACAAAACTTACAGAAGAAGAAACAACCGTCAATAGATATTCCATTGACAATGTAAATAAGTGCGAACAAAAACAATACGAGAACAAAAGAAATTATAAGGTCAAAGAAGGACAACAAgatcaattttataaaaaaaacagATATACCAACTCGTATCATCAGAGAGGCAGAAGTTCTTACAAGTTTCAAGgtaataaatattatactaATAAACATTATTCGGATAGATTGCAAACAGATATACAAGATGTATcgagcttaaacaaggaagaaccATATTCTAGTGCGGATACAAATCTACATAGAAATAGAAAGTTATCGATTGAAAACAAGGATAGAAGAAGCACTATTACCAAAGACAATAACAGCATAGAGTATAACGGCATaaagcagtctaataatcaagACAAAGAATTTACATATTCTAGTTCAGGGTCGAAACAATTGAATACATACCATAAAAACGCAAGGAAATATCCATATAATGCTAGACACAATAGAGAAGAATACAATTACAAAGAAAGAAAACATAATTACCAAGGACAGAATGGAACTTGGCAAGGTTGTACCATGGAAGACAAGCAATCGGATAGAAACGAACAAACATGCAATCGAAAAGATTCTAACGAAACTAAGCAAGATATTAGCGAAGAAACTAATAAAGCCATGGTAAAAGAAACCAAAGAAAGAGGATACAATTATCAAGGACGCAATGGATTCAAAGAACACAGAAAAGGCGAGAAAACTGAAGGGTACAAAGAGAGGGATAGAAGCAAGAATAGTATATTCGATAAtaaagaaaaggaaaaggaaaatgaaaattggaGGAATAAGGGAGAAATCGGTGAAAAGGGCAGTGTTCAAAAACGAATACAAAATAGAAGATCTCCGCTCGACGACGACGCGAGTCAAAGGGAAAGACTTGCCGATCAATTAAACAGAGGACAATTGGAATGTTTAGTGTGTTGCGAGTGGATTAGACAGAATGATTATATTTGGTCGTGTTCTAATTGCTATCATGTTTTACATCTGAAATGTGTGAAAAAATGGGCAAAATCTTCGCAAGCGGATAATGGTTGGAGATGTCCAGCGTGTCAGAATGTAAGTATAACGATTCCCGACGAGTATTTCTGCTTCTGCGGTAAGACGAGGGCTCCAGAATGGAATCGTAGAGATGTTGCGCATTCTTGTGGAGAAGTTTGTGGTAGAACATTATCGAAAAATACTTGTCCTCACAAGTGTACTCTTCTCTGTCATCCTGGATCTTGTCCGCAATGCATAGCAATGGTTACGAGGTATTGTGGCTGCGGTAAAACATCACAAACGGTACAATGTAGCGCGCACAAGCTATTGTTGTGCGACGATACGTGCGATAAGGATTTAAATTGTGGCACGCATAAATGCGAGAAAAGGTGTCATCACGGAGAATGTCCAAGTTGCGAGAAAACAGTTGAGCAAGAATGTTATTGCGGTAAAGACAAGAGAGAAACAACTTGTCAAAGTAATATTTCGCTTACATACTCTTGCAACAGCGTCTGCGGTAAATTATTAGATTGTGGTGCACATATGTGTACGAAGCTATGCCATCCAGGTGTTTGCGATCCATGTAGTTTGATCCCAGAGAAAGTGACAACTTGTTGCTGCGGCCAAACACCGTTAACAGAGAAACGACAAACTTGTTTAGACCCAATTCCGGTTTGCAACAAAGTATGTTCGAAAAGTCTAAAATGTGGTCAACCGAATAATCCTCACATATGCAAAGCAACGTGTCACAAAGGGGATTGTCCTATTTGCGATTTAACTACAGACGTCAAGTGTCGTTGCGGAAACATGGATAGAGAAATTGCTTGCATGGATTTAATATCAAAAGCTGACGATGCTCGATGTGAAAAAAGATGCACAAAAAAACGTTCCTGTGGCAAACATAAATGTAACCAGCTGTGTTGCATAGAAGTAGAACACGTTTGTCCTTTGATGTGTTCTAAAACTTTGAGCTGCGGCAAACACAAATGCGAACAAACTTGTCATAAAGGAAGATGTCAACCTTGTTGGCGTAGCAGCTTCGAAGAATTATATTGCGAATGTGGAGCTGCCGTGATATATCCTCCAGTGCCCTGTGGTACTAGAAGACCCGTTTGCGATAGGTCTTGTTCTCGTCAGCATTCCTGTGGGCACGAAGTATTTCACAATTGTCATAACGAGCCTACGTGTCCTCCCTGCACCGTCCTTACGCAGAGGTGGTGTCACGGTAAACATGAGCTTCGTAAAGCTGTACCATGTCACTTTAATGGAATTTCGTGCGGTTTACCGTGTAACAAGCCTATTTCTTGCGGTCGACACAAATGTCTCGCAATTTGTCATCCTGGTCAGTGCGAAAAACCTGGACAACAATGTTCCCAACCGTGTACTATTCCAAGAGAAATGTGTGGACACATTTGCGCCGCTCCGTGTCACGACGGTAAATGCCTAGATACGCCGTGCAAAGAAATGGTGAAGGTAACATGCCAGTGCGGACATAGAACTACGTCTCGTGCTTGTGCCGAAAATTCTAAAGAGTATCAAAGAATAGCGAGCAGCATATTAGCTAGTAAAATGGCTGATATGCAACTAGGTCATTCCGTTGATTTGGAAGAAGTGTTCGGTCAAGGAGCAAAAAAACAGAATCAGTTGAAAACTCTTGAATGTAACGACGAATGCAAGCTGATAGAACGAAATCGAAGATTAGCACTAGGTTTGCAAATTGTAAACCCGGATCTGAGCGGAAAATTAATGCCCAGATATAGTGATTTCATGAAGCAGTGGGCTAAAAAAGATCCACTCTTTTGTCAAATGGTCCACGAAAAATTGACAGAATTAGTTCAATTGGCAAAGACCTCGAAGCAAAAATCGCGCAGTTATTCGTTCGATAGCATGAATAAAGATAGACGTCATTTCATTCACGAGTCCTGCGAGCATTTTGGCTGTGAAAGTCAAGCATACGATCAGGAGCCTAAAAGAAATGTTGTTGCCACTGCTGTAAAAGATAAGTGTTGGTTGCCAAGCTATAGTTTATTAGAAATTGTGCAACGAAAAAATGGTCAGAGAAAAGTTCCTGGTCCAATGTTGAATACTTCAAAAGCTAACGGATCTGTAAAGACGATATTGTCACTGCCTACGAAACGGAACCAAAAAGTAGAAATACAGTCTAATACAAAAATGCCGGAACCAGAACTAGAATCAGAACCAGAAATAGACTACTTTGATTACAAAGGTTAA
Protein Sequence: MATWDGSYSEPDDQHFYLYSDQNVAASTTGSWTFFPNDVSNDYTRENRELYVQNDSVFHQNCPSTLYHSNTNVMPNIVTSGRSYQEHLRNASDNSQTLTNMQHLPKNLKLENCFVPAVDYWSNDYDANETKTKHSYAKGMKQVATSVKKESNLHATAREFVPNLNSKSANKRQESQNMELPCSIDCVDHYARDTKLTEEETTVNRYSIDNVNKCEQKQYENKRNYKVKEGQQDQFYKKNRYTNSYHQRGRSSYKFQGNKYYTNKHYSDRLQTDIQDVSSLNKEEPYSSADTNLHRNRKLSIENKDRRSTITKDNNSIEYNGIKQSNNQDKEFTYSSSGSKQLNTYHKNARKYPYNARHNREEYNYKERKHNYQGQNGTWQGCTMEDKQSDRNEQTCNRKDSNETKQDISEETNKAMVKETKERGYNYQGRNGFKEHRKGEKTEGYKERDRSKNSIFDNKEKEKENENWRNKGEIGEKGSVQKRIQNRRSPLDDDASQRERLADQLNRGQLECLVCCEWIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVSITIPDEYFCFCGKTRAPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCIAMVTRYCGCGKTSQTVQCSAHKLLLCDDTCDKDLNCGTHKCEKRCHHGECPSCEKTVEQECYCGKDKRETTCQSNISLTYSCNSVCGKLLDCGAHMCTKLCHPGVCDPCSLIPEKVTTCCCGQTPLTEKRQTCLDPIPVCNKVCSKSLKCGQPNNPHICKATCHKGDCPICDLTTDVKCRCGNMDREIACMDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHVCPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCDRSCSRQHSCGHEVFHNCHNEPTCPPCTVLTQRWCHGKHELRKAVPCHFNGISCGLPCNKPISCGRHKCLAICHPGQCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPLFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRKNGQRKVPGPMLNTSKANGSVKTILSLPTKRNQKVEIQSNTKMPEPELESEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: iTF_00863650;
80% Identity: -