Basic Information

Insect: Lasioglossum pauxillum
Gene Symbol: stc
Assembly: GCA_028455745.1
Location: CM052304.1:22214-26916[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.6e+04 -4.4 1.6 15 19 553 557 552 557 0.81

2 13 0.084 1.1e+03 0.3 0.4 4 10 586 592 585 592 0.95

3 13 2.1e-05 0.27 11.8 13.9 4 18 603 617 601 618 0.94

4 13 5.1e-07 0.0066 17.0 15.0 1 18 654 671 654 672 0.96

5 13 1.4 1.8e+04 -3.6 0.8 6 10 700 704 699 704 0.88

6 13 8.9e-10 1.1e-05 25.8 13.3 1 19 710 728 710 728 0.98

7 13 1.3e-05 0.17 12.5 11.1 4 18 775 789 768 790 0.86

8 13 2 2.6e+04 -4.7 1.6 5 10 819 824 819 824 0.90

9 13 0.00059 7.6 7.2 8.4 1 11 830 840 830 841 0.97

10 13 7.2e-11 9.3e-07 29.3 14.0 1 19 857 875 857 875 0.98

11 13 2 2.6e+04 -6.7 8.9 10 19 922 932 911 932 0.77

12 13 6.3e-07 0.0081 16.7 12.6 1 16 968 983 968 994 0.85

13 13 2.5e-05 0.32 11.6 11.2 1 19 1000 1019 1000 1019 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.6e+04	-4.4	1.6	15	19	553	557	552	557	0.81
2	13	0.084	1.1e+03	0.3	0.4	4	10	586	592	585	592	0.95
3	13	2.1e-05	0.27	11.8	13.9	4	18	603	617	601	618	0.94
4	13	5.1e-07	0.0066	17.0	15.0	1	18	654	671	654	672	0.96
5	13	1.4	1.8e+04	-3.6	0.8	6	10	700	704	699	704	0.88
6	13	8.9e-10	1.1e-05	25.8	13.3	1	19	710	728	710	728	0.98
7	13	1.3e-05	0.17	12.5	11.1	4	18	775	789	768	790	0.86
8	13	2	2.6e+04	-4.7	1.6	5	10	819	824	819	824	0.90
9	13	0.00059	7.6	7.2	8.4	1	11	830	840	830	841	0.97
10	13	7.2e-11	9.3e-07	29.3	14.0	1	19	857	875	857	875	0.98
11	13	2	2.6e+04	-6.7	8.9	10	19	922	932	911	932	0.77
12	13	6.3e-07	0.0081	16.7	12.6	1	16	968	983	968	994	0.85
13	13	2.5e-05	0.32	11.6	11.2	1	19	1000	1019	1000	1019	0.95

Sequence Information

Coding Sequence: ATGGCTACATGGGATGGTTCGTATTCTGAGCCGGACGATCAACATTTTTATTTGTACTCTGATCAAAATGTTGCTGCTTCTACAACCGGAAGCTGGACATTTTTTCCTAACGATGTAAGTAACGATTATACACGAAAAAATCGAGAATTTTATATGCAAAATGATTCTGTGTTCCATCAAAATTGTCCAAGTACTTTATATCATTCGAATACGAATGTAATGCCCAACATTGTGACAAGTGGTCGTAGTTATCAGGAACATTTAAGAAACGCCTCGGATAATTCGCAAACATTGACTAATATGCAACACTTGCCAAAAAATGTGAAACCAGAAAATTCATTTGTACCTGCTGTCGATTATTGGAGCAACGATTACGATGCAAACGAGACTAAGATTAAGCATAGTTATGCAAAAGGAACGAAACACGTTGCAACCATTGTGAAAAAAGAGTCAAACTTACATGCTACAGCTCGAGAATTTGTACCGAATCTGAATTCCAAGTCTGCTAATAAAAGACAGGAATCGCAAAATATGGAACTTCCTTGTTCCATCGACCGTGTCGGCTGTTACGCCAGAGATACAAAACTTACAGAAGAAGAAACAACTGTTGATAGATATTCCATTGACAATGTAAACAAGTACGAACAAAAACAATACGACAACAAAAGAAATTATAAGGTCAAAGAAGGACAACAAGATCAATTTTATAAAAAAAACAGATATACCAACTCGTATCATCAGAGAGGCAGAAGTTCTTATAAGTTTCAAGGTAATAAATATTATACTAATAAACATTATTCGGATAGATTGCAAACGGATATACAAGATGTATCGAGCTTAAACAAGGAAGAACCATATTCTAGTACGGATACAAATCTACATAGGAATAAAAAGTTGTCGATCGAAAACAAGGATAGAAGAAGCACTATTACCAAAGACAATAACAGCATAGAGTCTAACTGCGTAAAGCAGTCTAATAATCAAGACAAAGAATTTACATATTCTAGTTCAGGGTCGAAACAATCGAATACATACCATAAAAACGCAAGGAAATATCCATATAATGCTAGACATAATAGAGAAGAATACAATTACAAAGAAAGAAAACATAATTACCAAGGGCAGAATGGAACATGGCAAGGTTGTACCATGGAAGATAAACAAACGGATAGAAACGAACAAACATGCAATCGAAAAGATTCTAATGAAACTATGCAAGATATTAGCGAAGAAACTAATAAAGCCATGGTAAAAGAAACCAAAGAAAGAGGATACAATTATCAAGGACGCAATGGATTCAAAGAATACAGAAAAGGAGACAAAACTGAAGGGTACAAAGAGAGGGATAGAAGCAAGAATATCATATTCGATAATAAAGAAAAGGAAAATGAAAATTGGAGGAATAAGGGAGAAATCGGTGAAAAGGGCACTGTTCAAAAACGAATACAAAATCGAAGATCTCCCCTCGACGACGACGCGAGTCAAAGGGAAAGACTTGCCGATCAATTAAATAGAGGACAATTGGAATGTTTAGTGTGTTGCGAGTGGATTAGACAGAACGATTATATTTGGTCGTGTTCTAATTGCTATCATGTTTTACATCTGAAATGTGTGAAAAAATGGGCAAAATCTTCGCAAGCAGATAACGGTTGGAGATGTCCAGCATGTCAGAATGTAAGTATAACGATTCCCGACGAGTATTTCTGCTTCTGCGGTAAGACGAGAGCTCCAGAATGGAATCGTAGAGATGTTGCGCATTCTTGCGGAGAAGTTTGTGGTAGAACATTATCGAAAAATACTTGTCCTCACAAGTGTACTCTTCTCTGTCATCCTGGATCTTGTCCGCAATGCGTAGCAATGGTTACGAGGTATTGTGGCTGCGGTAAAACATCGCAAACGGTACAATGTAGCGCGCACAAGCTATTGTTGTGCGACGATACGTGCGATAAGGACTTAAATTGTGCCATGCATAAATGCGAGAAAAAGTGTCATCACGGAGAATGTCCAAGTTGCGAGAAAACAGTTGAACAAGAATGTTATTGCGGTAAAGACAAGAGAAAAATAACTTGTCAAAGTAATATTTCGCTTACGTACTCTTGCAAAAGCGTCTGCGGTAAATTATTAGATTGTGGTAATCATACGTGCACGAAGCTATGCCATCCAGGTGTTTGCGATCCGTGTAGTTTGACCCCAGAAAAAGTGACGACTTGTTGCTGCGGCCAAACACCGTTAACGGAGAAACGACTAACTTGTTTAGACCCAATTCCGGTTTGTGACAAAGTATGTTCGAAAAGTCTAAAATGTGGTCAACCGAATAATCCTCACATATGCAAAGCAACGTGTCACGAAGGGGATTGTCCTATTTGCGATTTAACTACAGACGTTAAATGTCGTTGCGGGAACATGGATAGAGAAATAGCTTGTATGGATTTAATATCAAAAGCTGACGATGCTCGATGTGAAAAAAGATGCACAAAAAAACGATCCTGTGGCAAACATAAATGTAACCAGCTGTGTTGCATAGAAGTAGAACACGTTTGTCCTTTGATGTGTTCTAAAACTTTGAGCTGCGGCAGACACAAATGCGAACAAACTTGTCATAAAGGAAGATGTCAACCTTGTTGGCGTAGCAGCTTCGAAGAATTATATTGCGAATGTGGAGCTGCCGTGATATATCCTCCAGTGCCCTGTGGTACTAGAAGACCCGTTTGCGATAGGTCTTGTTCTCGTCAGCATTCCTGTGGGCACGAAGTATTTCACAATTGTCATAACGAGCCTACGTGTCCTCCCTGCACCGTCCTTACGCAGAGGTGGTGTCACGGTAAACACGAGCTTCGTAAAGCTGTACCGTGTCACTTTAATGGAATTTCGTGCGGTTTACCGTGTAACAAGCCTATTTCTTGCGGTCGACACAAATGTCTCGCAATTTGTCATCCTGGTCAGTGCGAAAAACCTGGACAACAATGTTCCCAACCATGTACTATTCCAAGAGAAATGTGTGGACATATTTGCGCCGCTCCATGTCACGACGGTAAATGCCTAGATACACCGTGCAAAGAAATGGTCAAGgtaacatgccagtgcggacatagaactacatctcgtgcttgtgccgagaattcgaaagagtatcaaagaatagcgagcagcatattagctagtaaaatggctgatatgcaactaggtcattccgttgatttggaagaggtgttcggtcaaggagcaaaaaaacagaatcagttgaaaacgcttgaatgtaacgacgaatgcaagctgatagaacgaaatcgaagattagcactaggtttgcaaattgtaaacccggatctgagtggaaaattaatgcccagatatagtgaTTTCATGAAGCAGTGGGCTAAAAAAGATCCACTCTTTTGTCAAATGGTCCACGAAAAATTGACAGAATTAGTTCAATTGGCAAAGACCTCGAAGCAAAAATCGCGCAGTTATTCGTTCGATAGCATGAATAAAGATAGACGTCACTTCATTCACGAGTCCTGCGAGCATTTTGGATGTGAAAGTCAAGCATACGATCAGGAGCCTAAAAGAAATGTTGTTGCCACTGCTGTAAAAGATAAGTGTTGGTTGCCAAGCTATAGTTTATTAGAAATTGTGCAACGAAAAAATGGTCAGAGAAAAGTTCCTGGTCCAATGTTGAATACTTCAAAAGCTAACGGATCTGTAAAGACGATATTGTCACTGCCTACGAAAAAGAACCAAAAAGTAGAAATACAGTCTAATACAAAAATGCCGGAACCAGAACTAGAACCAGAACCAGAAATAGACTACTTTGattacaaaggttaa
Protein Sequence: MATWDGSYSEPDDQHFYLYSDQNVAASTTGSWTFFPNDVSNDYTRKNREFYMQNDSVFHQNCPSTLYHSNTNVMPNIVTSGRSYQEHLRNASDNSQTLTNMQHLPKNVKPENSFVPAVDYWSNDYDANETKIKHSYAKGTKHVATIVKKESNLHATAREFVPNLNSKSANKRQESQNMELPCSIDRVGCYARDTKLTEEETTVDRYSIDNVNKYEQKQYDNKRNYKVKEGQQDQFYKKNRYTNSYHQRGRSSYKFQGNKYYTNKHYSDRLQTDIQDVSSLNKEEPYSSTDTNLHRNKKLSIENKDRRSTITKDNNSIESNCVKQSNNQDKEFTYSSSGSKQSNTYHKNARKYPYNARHNREEYNYKERKHNYQGQNGTWQGCTMEDKQTDRNEQTCNRKDSNETMQDISEETNKAMVKETKERGYNYQGRNGFKEYRKGDKTEGYKERDRSKNIIFDNKEKENENWRNKGEIGEKGTVQKRIQNRRSPLDDDASQRERLADQLNRGQLECLVCCEWIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVSITIPDEYFCFCGKTRAPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCVAMVTRYCGCGKTSQTVQCSAHKLLLCDDTCDKDLNCAMHKCEKKCHHGECPSCEKTVEQECYCGKDKRKITCQSNISLTYSCKSVCGKLLDCGNHTCTKLCHPGVCDPCSLTPEKVTTCCCGQTPLTEKRLTCLDPIPVCDKVCSKSLKCGQPNNPHICKATCHEGDCPICDLTTDVKCRCGNMDREIACMDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHVCPLMCSKTLSCGRHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCDRSCSRQHSCGHEVFHNCHNEPTCPPCTVLTQRWCHGKHELRKAVPCHFNGISCGLPCNKPISCGRHKCLAICHPGQCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPLFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRKNGQRKVPGPMLNTSKANGSVKTILSLPTKKNQKVEIQSNTKMPEPELEPEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: iTF_00863650;
80% Identity: -