Basic Information

Insect: Lasioglossum malachurum
Gene Symbol: stc
Assembly: GCA_028455605.1
Location: CM052311.1:32255843-32260563[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.8e+04 -4.4 1.6 15 19 554 558 553 558 0.81

2 13 0.085 7.8e+02 0.3 0.4 4 10 587 593 586 593 0.95

3 13 2.1e-05 0.19 11.8 13.9 4 18 604 618 602 619 0.94

4 13 2.4e-07 0.0022 18.0 17.8 1 18 655 672 655 673 0.97

5 13 1.4 1.3e+04 -3.6 0.8 6 10 701 705 700 705 0.88

6 13 5.1e-08 0.00047 20.2 11.2 1 19 711 729 711 729 0.98

7 13 1.3e-05 0.12 12.5 11.1 4 18 776 790 769 791 0.86

8 13 2 1.8e+04 -4.7 1.6 5 10 820 825 820 825 0.90

9 13 0.00059 5.4 7.2 8.4 1 11 831 841 831 842 0.97

10 13 1.2e-10 1.1e-06 28.5 14.3 1 19 858 876 858 876 0.98

11 13 2 1.8e+04 -8.1 9.3 10 18 923 932 912 932 0.77

12 13 3.3e-07 0.003 17.6 11.3 1 16 969 984 969 995 0.85

13 13 2.5e-05 0.23 11.6 11.2 1 19 1001 1020 1001 1020 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.8e+04	-4.4	1.6	15	19	554	558	553	558	0.81
2	13	0.085	7.8e+02	0.3	0.4	4	10	587	593	586	593	0.95
3	13	2.1e-05	0.19	11.8	13.9	4	18	604	618	602	619	0.94
4	13	2.4e-07	0.0022	18.0	17.8	1	18	655	672	655	673	0.97
5	13	1.4	1.3e+04	-3.6	0.8	6	10	701	705	700	705	0.88
6	13	5.1e-08	0.00047	20.2	11.2	1	19	711	729	711	729	0.98
7	13	1.3e-05	0.12	12.5	11.1	4	18	776	790	769	791	0.86
8	13	2	1.8e+04	-4.7	1.6	5	10	820	825	820	825	0.90
9	13	0.00059	5.4	7.2	8.4	1	11	831	841	831	842	0.97
10	13	1.2e-10	1.1e-06	28.5	14.3	1	19	858	876	858	876	0.98
11	13	2	1.8e+04	-8.1	9.3	10	18	923	932	912	932	0.77
12	13	3.3e-07	0.003	17.6	11.3	1	16	969	984	969	995	0.85
13	13	2.5e-05	0.23	11.6	11.2	1	19	1001	1020	1001	1020	0.95

Sequence Information

Coding Sequence: ATGGCTACATGGGATGGTTCGTATTCTGAGCCGGACGATCAACATTTTTATTTGTACTCTGATCAAAATGTTCCTGCTTCTACAACCGGAAGCTGGACATTTTTTCCTAACGATGTAAGTAACGATTATACACGAGAAAATCGAGAACTTTATGTGCAAAATGATTCTGTGTTCCATCAAAATTGTCCAAATACTTTATATCATTCGAATACGAATGTAATGCCCAACATTGTGACAAGTGGTCGTAGTTATCAGGAACATTTAAGAAACACCTCAGATAATTCGCAAACATTGACTGATATGCAACACTTGCCAAAAAATGTGAAACTAGAAAATTGCTTTGTACCTGCTGTCGATTATTGGAGCAACAATTACGATGAAAATGAGACTAAGACTAAGCATAGTTATGCAAAAGGAATGAAACAAGTTGCAACCACTGTAAAAACAGAGTCAAACTTACATGCTACAGCTCGAGAATTTGTACCGAATCTAAATTCCAAGTCTGCTAATAAAAGACAGGAATCGCAAAACATGGAACTTCCTTGTTCTATTGACCATGTCGACTGTTATGCCAGAAATACAAAACTTACAGAAGAAGAAACAACCGTCGATAGATATTCCATTGACAATGTAAATAAGTGCGAACAAAAACAATACGAGAACAGAAGAAATTATAAGATCAAAGAAGGACAACAAGATCAATTTTATAAAAAAAACAGATATACCAACTCGTATCATCAGAAAGGTAGAAGTTCTTACAAGTTTCAAGGTAATAAATATTATACTAATAAACATTATTCGGATAGATTGCAAACAGATATACAAGATGTATCGAGCTTAAACAAGGAAGAACCATATTCCAGTGCGGATACAAATCTACATCGGAATAAAAAGTTATCGATCGAAAACAAGGATAGAAGAAGCACTATTACCAAAGACATCAACAGCAGCATAGAGTCTAACGGCATAAAGCAGTCTAATAATCAAGACAAAGAATTTACATATTCTAGTTCAGGGTCGAAACAATCGAATGCATACCATAAAAATGCAAGGAAATATCCATATAATGCTAGACATAATAAAGAAGAATACAATTACAAAGATAGAAAACATAATTACCAAGGGCAGAATGGAACTTGGCAAGGTTGTACCATGGAAGACAAGCAATCGGATAGAAACGAACAAACATGCAATCGAAAAGATTTTAACGAAACTAAGCAAGATATTAGCGAAGAAACTAATAAAGCCATGGTAAAAGAAACCAAAGAAAAAGGATACAATTATCAAGGACGCAATGGATTCAAAGAACACAGAAAAGGAGAGAAAACTGAAGGGTACAAAGAGAGGGATAGAAGCAAGAATAGTATATACGATAATAAAGAAAAGGAAAATGAAAATTGGAGGAATAAGGCAGAAATCGGTGAAAAGGGCAGTGTTCAAAAACGAATACAGAATAGAAGATCTCCGCTCGACGACGATGCGAGTCAGAGGGAAAGACTTGCTGATCAATTAAACAGAGGACAATTGGAATGTTTAGTGTGTTGCGAGTGGATTAGACAGAACGATTATATTTGGTCATGTTCTAATTGCTATCATGTTTTACATCTGAAATGTGTGAAAAAATGGGCAAAATCTTCGCAAGCAGATAACGGTTGGAGATGTCCAGCGTGTCAGAATGTAAATATAACGATTCCCGACGAGTATTTCTGCTTCTGCGGTAAGACAAGAGCTCCAGAATGGAATCGTAGAGATGTTGCGCATTCTTGCGGAGAAGTTTGTGGTAGAACATTATCGAAAAATACTTGTCCTCACAAGTGTACTCTTCTCTGTCATCCTGGATCTTGTCCGCAATGCGTAGCAATGGTTACGAGGTATTGTGGCTGCGGTAAAACATCACAAACGGTACAATGTAGCGCGCACAAGCTATTGTTGTGCGATGATACGTGCGATAAGGATTTAAATTGTGGCACGCATAAATGCGAGAAAAGGTGTCATCACGGAGAATGTCCAAGTTGCGAGAAAACAGTTGAGCAAGAATGTTATTGCGGTAAAGACAAGAGAGAAATAACTTGTCAAAGTAATATTTCGCTTACATACTCTTGCAAAAGCGTCTGCGGCAAATTATTAGATTGTGGTGCACATATGTGCACGAAGCTATGCCATCCGGGTGTTTGCGATCCATGTAGTTTGACTCCAGAGAAAGTGACAACTTGTTGCTGCGGCCAAACACCGTTAACAGAGAAACGACAAACTTGTTTAGACCCAATTCCAGTTTGCAACAAAGTATGTTCGAAAAGTCTAAAATGTGGTCAACCGAATAATCCTCACATATGCAAAGCAACGTGTCACGAAGGAGATTGTCCTATTTGCGATTTAACTACAGACGTTAAGTGTCGTTGCGGAAACATGGATAGAGAAATAGCTTGCATGGATTTAATATCAAAAGCTGACGATGCTCGATGTGAAAAAAGATGCACAAAAAAACGTTCCTGTGGCAAACATAAATGTAACCAGCTGTGTTGCATAGAAGTAGAACACGTTTGTCCTTTGATGTGTTCTAAAACTTTGAGCTGCGGCAAACACAAATGCGAACAAACTTGTCATAAAGGAAGATGTCAACCTTGTTGGCGTAGCAGCTTCGAAGAATTATATTGCGAATGTGGAGCTGCCGTTATATATCCTCCAGTGCCCTGTGGTACTAGAAGACCCGTTTGCGATAGGTTTTGTTCTCGTCAGCATTCCTGTGGGCACGAAGTGTTTCACAATTGTCATAACGAGCCTACGTGTCCTCCCTGCATCGTTCTTACGCAGAGGTGGTGTCACGGTAAACACGAGCTCCGTAAAGCTGTACCATGTCACTTTAATGGAATTTCGTGCGGTTTACCATGTAACAAGCCTATTTCTTGCGGTCGACACAAATGTCTCGCAATTTGTCATTCCGGTCAGTGCGAAAAACCTGGACAACAATGTTCCCAACCGTGTACTATTCCAAGAGAAATGTGTGGACACATTTGCGCCGCTCCGTGTCACGACGGTAAATGCCTAGATACGCCGTgcaaagaaatggtgaaggtaacatgccagtgcggacatagaactacatctcgtgcttgtgccgagaattcgaaagagtatcaaagaatagcgagcagcatattagctagtaaaatggctgatatgcaactaggtcattccgttgatttggaagaggtgttcggtcaaggagcaaaaaaacagaatcagttgaaaactcttgaatgtaacgacgaatgcaagctgatagaacgaaatcgaagattagcactaggtttgcaaattgtaaacccggatttgagcggaaaattaatgcccagatatagtgaTTTCATGAAGCAGTGGGCTAAAAAAGATCCACTATTTTGTCAAATGGTCCACGAAAAATTGACAGAATTAGTTCAATTGGCAAAGACCTCGAAGCAAAAATCGCGCAGTTATTCGTTCGATAGCATGAATAAAGATAGACGTCATTTCATTCACGAGTCCTGCGAACATTTTGGCTGTGAAAGTCAAGCATACGATCAAGAGCCTAAAAGAAATGTTGTTGCCACTGCTGTAAAAGATAAGTGTTGGTTGCCAAGCTATAGTTTATTAGAAATTGTGCAACGAAAAAATGGTCAGAGAAAAGTTCCTGGTCCAATGTTGAATACTTCAAAAGCTAACGGATCTGTAAAGACGATATTGTCACTGCCTACAAAAAAGAACCAAAAAGTAGAAATACAGTCTAATACAAAAATGCCGGAACCGGAACCAGAACTAGAACCAGAACCAGAACCAGAAATAGACTACTTTGATTACAAAGGTTAA
Protein Sequence: MATWDGSYSEPDDQHFYLYSDQNVPASTTGSWTFFPNDVSNDYTRENRELYVQNDSVFHQNCPNTLYHSNTNVMPNIVTSGRSYQEHLRNTSDNSQTLTDMQHLPKNVKLENCFVPAVDYWSNNYDENETKTKHSYAKGMKQVATTVKTESNLHATAREFVPNLNSKSANKRQESQNMELPCSIDHVDCYARNTKLTEEETTVDRYSIDNVNKCEQKQYENRRNYKIKEGQQDQFYKKNRYTNSYHQKGRSSYKFQGNKYYTNKHYSDRLQTDIQDVSSLNKEEPYSSADTNLHRNKKLSIENKDRRSTITKDINSSIESNGIKQSNNQDKEFTYSSSGSKQSNAYHKNARKYPYNARHNKEEYNYKDRKHNYQGQNGTWQGCTMEDKQSDRNEQTCNRKDFNETKQDISEETNKAMVKETKEKGYNYQGRNGFKEHRKGEKTEGYKERDRSKNSIYDNKEKENENWRNKAEIGEKGSVQKRIQNRRSPLDDDASQRERLADQLNRGQLECLVCCEWIRQNDYIWSCSNCYHVLHLKCVKKWAKSSQADNGWRCPACQNVNITIPDEYFCFCGKTRAPEWNRRDVAHSCGEVCGRTLSKNTCPHKCTLLCHPGSCPQCVAMVTRYCGCGKTSQTVQCSAHKLLLCDDTCDKDLNCGTHKCEKRCHHGECPSCEKTVEQECYCGKDKREITCQSNISLTYSCKSVCGKLLDCGAHMCTKLCHPGVCDPCSLTPEKVTTCCCGQTPLTEKRQTCLDPIPVCNKVCSKSLKCGQPNNPHICKATCHEGDCPICDLTTDVKCRCGNMDREIACMDLISKADDARCEKRCTKKRSCGKHKCNQLCCIEVEHVCPLMCSKTLSCGKHKCEQTCHKGRCQPCWRSSFEELYCECGAAVIYPPVPCGTRRPVCDRFCSRQHSCGHEVFHNCHNEPTCPPCIVLTQRWCHGKHELRKAVPCHFNGISCGLPCNKPISCGRHKCLAICHSGQCEKPGQQCSQPCTIPREMCGHICAAPCHDGKCLDTPCKEMVKVTCQCGHRTTSRACAENSKEYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPLFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRKNGQRKVPGPMLNTSKANGSVKTILSLPTKKNQKVEIQSNTKMPEPEPELEPEPEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00867078;
90% Identity: iTF_00861576; iTF_00860812; iTF_00862253; iTF_00866397; iTF_00867078; iTF_00865696; iTF_00862966; iTF_00763582; iTF_00864330; iTF_00762933;
80% Identity: -