Hato020956.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypomecis atomaria
Gene Symbol
sip1
Assembly
GCA_964007245.1
Location
OZ023294.1:7522299-7539063[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-58 3.8e-54 185.3 1.3 4 275 372 625 369 625 0.96
2 2 0.56 1.2e+04 -3.2 0.0 74 112 638 678 630 680 0.51

Sequence Information

Coding Sequence
ATGTCTGACGATGAGGTTATACGTTTTGAAATCACCGACTATGATTTGGACAACGAATTCAACTTTACAAGAAATCGCAAAGCAAAAAAGGAGCATCAAATCTACGGTGTATGGGCGAAAGACAGTGATGAGGAAGACAATGAAGACAACATTCGTCAAAGGACTCGCAAGCCTAAAGATTTCTCGGCACCCATCGGGTTTGTGGCAGGAGGAGTGCAGCAAGCTGGCAAGAAAAAAGAAGAGAAGAAAGCTAAAGAGCTAGAATCAACAGAAGCCTCCACATCTCGGCCCAAATTCGCACCAGACAGTTCTGATGAAGATGATCAGCCTGCCAACCCTGATGAGAGTGAGACTGCAGGCATCAGGCGAAAGGGTCAGGGCATGCGCTCCTCCAATATTGGAGGAAATATGGGCACGTGGGAGAAACATACCAAAGGAATTGGTGCCAAGCTGCTGTTGCAgATGGGGTACCAACCCGGCAAGGGTCTGGGCAAGGATCTGCAGGGTATATCGGCGCCCGTGGAGGCTACTGTGAGAAAGGGTAGAGGTGCTATTGGCGCTTATGGCCCTGAGAAAGCAGCGCAAAAAGCCAAGAGGGAAGAGGAGAAGCGTCTGAAAGAGAAAGAAGAACAAGAGAAGGGCACGACAGAGAAGTCGTACAACTGGAAGAAATCTCACAAAGGGCGCTATTTTTACCGCGACGCCGCCGACGTTATACAAGAGGGCAAGCCCACTATGCATACTGTAGCAACTAACGAGCTAGCCCGCGTGCCAGTGATCGACATGACGGGCAAAGAAAAACGAGTGTTAAGCGGATACCACGCCTTAAGAGCAGCCGCGCCGCGGTTCGAGCACGAGCCGCGGAGGAAGTGCGAGAACTTCGCCGCTCCTGAACTGGTGCATAACCTGGCCCTCATGGTCGAGTGCTGTGAACAGGATATTATACAAAACGCGCGCGAACTTCAAACGGCGGAAGACGAAATAGTGGTTCTGGAACGAGATCTAGACGAATGCAACATCAAGTTGAAAGAACACGATGACGTCATCGGTAAAGTAGAAGCGATTTTGCAGAGAGTGGAAGCGTTGAATAAGCCCGACATATCCCTAGAGGCTGCTTATGAAGTGCTCGCAGATTTGAAGGAAGCGTACCCGCTAGAATATGAAATGTTCGGCCTGGGTACTATAGCTGGCAACATCGTGAGTCCGCTACTGAGTGCGTTGTTAGCACCCTGGGAGCCGTTGGAAGCCCCTGGAGACCCCATACCTACGTTCTTGAAGTGGAGGAAATTGCTGACCGAAGAGGCGTACAACAGTTTGCTGTGGCAACACTACGTGCCTCATATTACTACTGCTGCCGAGAAATGGAATCCCCGCAACCCATTGCCGATGGTAGAAGCATTGAACGCGTGGGCCGAAGCCAGCCCGGCCTGGCTGGTGAAGCAGTGCGCGGCGAGATGTGTGGTGCCCAGGCTGCTGGAGGCTGCCCGAGGCTGGGACCCCACGCACGACACGCAGCCTGTGCACAGCTGGGTACTGCCCTGGCACGACTTGGCCGGTGACGCGTTAGCTACAGCAGTATACCCGCTAATCCGGTCGCGGCTAGCCAGCGCGCTATCCGCCTGGCATCCTGCTGACGGGTCGGCGCGGGGCGTGCTGGGGGCGTGGCGGGGGGCGTGGGGGGCGGCCCTCACTGCCTTGCTACATCACCACATCGTGCCGAAGTTGGAGCACTGTTTACATCACTCGCCGGTGGAACTCGTTGGGAGAGAAAACACGGCGTGGCTGTGGTGCGTAGACTGGCTGGACCTGCTCGGCGCGCCGACGGTAGCGGCTATAGCCAGCCGCGCGCTGCTACCGCGCTGGCTGGCTGCCTTGGCTGCGTGGCTCAACACTAACCCCACGCACGCCACTGTACTCAACTCCTATACAGAATTCAAGAAAATGTTCCCCGAAGAGGTGGTGAAAGAGCCGGCGGTGCGGGACGCGTTCCGCAAAGCTCTCGACATGATGAACCGGAGCACCGACATCGAGCTGGTGGagcccccgcccccgccccgctACACGCCCGCCCCGCCCCTCGAGCCCCTCGACACCTCGCGTATCGCAGACGCTTTGGCTTCAGCCACACAACAGAAGAGTTTCTCCGAGCTTCTAGAATCGAGATGCGTGATGAAAGGCATCACGTTCGTGCCTCTCGTGGGCAAGAGCCGGGAGGGCCGCCCCATCTACAAGATCGGGGAGATGCAGTGCTACGTCATCAGAAACGTTATCATGTACTCAAACGATGGGGGCAGGAACTTTGCACCCATCAGCATGGATCGGCTGTTGAAACTTGTGGAAgattaa
Protein Sequence
MSDDEVIRFEITDYDLDNEFNFTRNRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKAKELESTEASTSRPKFAPDSSDEDDQPANPDESETAGIRRKGQGMRSSNIGGNMGTWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKREEEKRLKEKEEQEKGTTEKSYNWKKSHKGRYFYRDAADVIQEGKPTMHTVATNELARVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCENFAAPELVHNLALMVECCEQDIIQNARELQTAEDEIVVLERDLDECNIKLKEHDDVIGKVEAILQRVEALNKPDISLEAAYEVLADLKEAYPLEYEMFGLGTIAGNIVSPLLSALLAPWEPLEAPGDPIPTFLKWRKLLTEEAYNSLLWQHYVPHITTAAEKWNPRNPLPMVEALNAWAEASPAWLVKQCAARCVVPRLLEAARGWDPTHDTQPVHSWVLPWHDLAGDALATAVYPLIRSRLASALSAWHPADGSARGVLGAWRGAWGAALTALLHHHIVPKLEHCLHHSPVELVGRENTAWLWCVDWLDLLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLNSYTEFKKMFPEEVVKEPAVRDAFRKALDMMNRSTDIELVEPPPPPRYTPAPPLEPLDTSRIADALASATQQKSFSELLESRCVMKGITFVPLVGKSREGRPIYKIGEMQCYVIRNVIMYSNDGGRNFAPISMDRLLKLVED