Aleu020633.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- sip1
- Assembly
- GCA_949125355.1
- Location
- OX421282.1:4589762-4600271[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-57 9.4e-53 180.2 0.3 5 275 374 626 370 626 0.96 2 2 0.16 2.4e+03 -1.5 0.0 70 114 635 681 630 685 0.70
Sequence Information
- Coding Sequence
- ATGTCCGACGATGAGGTTATACGTTTTGAAATCACGGACTACGATTTGGACAATGAATTCAATTTTTCTAGGGGCCGGAAAGCAAAAAAGGAACACCAAATCTACGGTGTATGGGCCAAAGACAGCGATGAAGAGGACAATGAAGACAATATCCGGCAACGGACTCGTAAGCCTAAAGACTTTTCAGCACCCATTGGTTTCGTGGCAGGCGGAGTACAGCAGGCAGGCAAGAAAAAggaagagaagaaaaaaactaaagAGCTAGAATCTACAGAAGCGTCCACATCTCGGCCCAAATTTGCACCGGACAGTTCAGATGAAGACGAACAACCAACCAACCCTGATGAAAGTGAGACAGCTGGCATCAGGCGAAAGGGACAGGGCATGCGCTCAGCCAATATCGGAGGCAATATGGGAACCTGGGAGAAACATACTAAGGGCATTGGTGCTAAGTTGCTGTTGCAGaTGGGATACCAGCCTGGCAAGGGTTTGGGCAAAGACCTGCAAGGAATATCAGCACCCGTGGAAGCCTCTGTCAGGAAGGGTAGAGGAGCAATTGGCGCTTATGGACCTGAAAAAGCAGCGCTAAAAGCTAAAAAGGAAGAGGAAAAGCGCTTGAAAGAGAAGGAAGAACAAGAGAAAGGAACAACAGAAAAAACGTACAACTGGAAGAAATCACACAAAGGGCGATATTTCTACCGAGATTCCGCTGACGTCATACAAGAGGGTAAACCCTCTATGCATACTATATCCAGCAACGAGTTATCCCGTGTCCCAGTAATTGACATGACGGGTAAAGAGAAGCGAGTGCTGAGCGGCTACCACGCGCTCCGAGCTGCAGCGCCGCGGTTCGAGCACGAGCCTAGGAGGAAATGCGAGAACTTCGCAGCTCCAGAACTAGCGCACAACTTGGCTCTCATGGTGGAATGCTGCGAACAGGATATAATCCAGAACGCGCGTGAGCTCCAGACGGCCGAAGACGAGATCGTCGTGCTAGAAAGAGACTTGGATGAATGCAATATCAAGTTACAAGAACATGACGACGTTATTGGCAAGGTGGAAGCCATATTGCTGAGGGTGGAAGAGATAAACAAGTCTGATATATCACTTGAAGATGCGTTTGAAGTATTGGCAGATTTGAAGGAGGAGTACCCGTTAGAATATGAAATGTTTGGCCTGGGCACCATAGCTGGCAACATTGTGAGCCCGCTTTTCAGCGCGTTACTGGCGCCCTGGCAACCATTGGAAGCGCCTCAAGACCCAATACCTACCTTCTTGAAATGGAAGAAAGTTTTGACCGAGGAGGCATACAACAGTTTACTGATGCAACACTATGTGCCCCATATTACAACTGCGGCTGGGCAGTGGAACCCCCGTAATCCAGTGCCCATGGTGCGAGCTCTGAGCGCGTGGGCGGAAGCTAGCCCGGGGTGGCTGGTGAAGCAGTGCGCTACCCGGTGTATAGTGCCGAGGCTGCTGGAGGCGGCGCGAGGCTGGGACCCCACTAACGACACCCAGCCCGTGCACAGCTGGGTGCTGCCCTGGCATGAACTAGCTGGTGACTCCCTAGCCACCGCCGTGTACCCTCTGATCCGGTCCCGGCTCGCGAGCGCGCTGTCCGCGTGGCACCCGGCCGACGGGTCCGCGCGCGGCGTGCTGGGCGCGTGGCGCGGGGCGTGGGGCGCCGCCCTCACCGCGCTGCTGCATCACCACATCGTGCCCAAGTTGGAACATTGCTTGAACCACTCGCCGGTCGAACTCGTCGGCAGAGAGAACACTGCATGGCTGTGGTGCGTAGATTGGCTGGACCTGCTCGGCGCGCCGACCGTGGCGGCCATAGCCGGCCGCGCTCTACTGCCACGCTGGCTGGCTGCGTTGGCTGCTTGGCTCAACACGAACCCCACGCACGCCACCGTGCTCAATTCTTACACAGAGTTCAAGAAAATGTTCCCCGAGGAAGTGCTAAAAGAGCCCGCGGTCCGCGACGCGTTCCGCAAGGCTCTGGATATGATGAACCGAAGCACCGATATCGACCTAGTGGAGCCCCCGCCCCCGCCTCGCTTCATCCCCGCGCCGCCTACCCTCGAACCAAAGGACACCTTGCGTATTGCTGACGCTCTTGCATCTGCCACACAACAAAAGAGCTTCTCCGAGCTCCTTGAATCAAGATGTGTCATGAAAGGCATCACCTTCGTACCGATCGTAGGGAAGACCAGGGAAGGCAGACCCATCTACAAGATCGGTGACCTGCAGTGCTATGTTATTAGAAACGTGGTCATGTACTCTAATGATGGTGGCAGGAACTTTGGCCCGATAAGCATGGATAGACTGTTGAAACTTGTAGAAGATTGA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNFSRGRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKKTKELESTEASTSRPKFAPDSSDEDEQPTNPDESETAGIRRKGQGMRSANIGGNMGTWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEASVRKGRGAIGAYGPEKAALKAKKEEEKRLKEKEEQEKGTTEKTYNWKKSHKGRYFYRDSADVIQEGKPSMHTISSNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCENFAAPELAHNLALMVECCEQDIIQNARELQTAEDEIVVLERDLDECNIKLQEHDDVIGKVEAILLRVEEINKSDISLEDAFEVLADLKEEYPLEYEMFGLGTIAGNIVSPLFSALLAPWQPLEAPQDPIPTFLKWKKVLTEEAYNSLLMQHYVPHITTAAGQWNPRNPVPMVRALSAWAEASPGWLVKQCATRCIVPRLLEAARGWDPTNDTQPVHSWVLPWHELAGDSLATAVYPLIRSRLASALSAWHPADGSARGVLGAWRGAWGAALTALLHHHIVPKLEHCLNHSPVELVGRENTAWLWCVDWLDLLGAPTVAAIAGRALLPRWLAALAAWLNTNPTHATVLNSYTEFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIDLVEPPPPPRFIPAPPTLEPKDTLRIADALASATQQKSFSELLESRCVMKGITFVPIVGKTREGRPIYKIGDLQCYVIRNVVMYSNDGGRNFGPISMDRLLKLVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825754;
- 90% Identity
- iTF_00826983;
- 80% Identity
- -