Ecor013041.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- sip1
- Assembly
- GCA_947095575.1
- Location
- OX352718.1:7547881-7557802[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-62 5.4e-58 196.9 2.4 4 275 374 627 371 627 0.96 2 2 0.57 5.6e+03 -3.2 0.0 74 110 640 678 632 683 0.53
Sequence Information
- Coding Sequence
- ATGTCCGACGACGAGGTTATTCGTTTTGAGATCACCGACCATGATTTGGACAATGAATTCAACTTCAATAGACCCCGTGGAAGAAACAAGAAGGAGCATCAAATATACGGTATGTGGGCCAAAGACAGTGATGAAGAAGATAATGAGGATAACATCCGTCAAAGAACCCGGAAGCCTAAAGACTACTCTGCACCTATTGGTTTTGTTATGGGTGGAGTGCAACAGGCGGGCAAGAAAAAAGAAGAAAAAAAAGAACTAGAACCAACAGAAACAATCACTGCCTCCACTTCTCGTCCTAAGCTTGCTCCAGACAGTTCTGATGAAGAGAAGCAACCAAGCTTGCCAGCGGAGACTGATACAGCAGGCATCAGGAGAAAGGGCCAGGGTATGCGACCTGCCAACTTGGGTGGTAATGTGGGGAATTGGGAGAAGCACACAAAGGGAATTGGTGCCAAATTACTGTTACAGATGGGTTACAAACCAGGTAAAGGTTTGGGTAAAGACCTCCAGGGAATATCAGCACCGGTGGAAGCCACTGTGAGGAAAGGACGAGGGGCTATTGGAGCTTATGGACCCGAGAAAGCAGCTTTAAAAGCAAAGAAGGAAGAGGAGAAACGCCTCAAAGAGAAAGAGGAGCAAGAGAAAGGGATTGCTGAGAAGTCGTACAACTGGAAGAAGTCCCACAAAGGACGTTACTTCTACAGAGACTCTGCAGATGTGATACAAGAGGGTAAACCCACGATGCATACTATGGCCAGCAGTGAGCTATCTCGCGTGCCAGTGATCGATATGACTGGTAAGGAGAAGCGTGTCTTAAGTGGATACCATGCTTTACGAGCCGCCGCCCCTCGCTTCGAGCACGAGCCACGTCGCAAGTGTGACCACTTTGCTGCACCAGAATTAGCTCATAATCTGACCCTTATGGTTGAATGCTGCGAGCAGGACATCATCCAGAACGCGCGAGAGCTGAACGCTGCAGAAGATGAGATCGTAGTCCTGGAGCGAGATCTCCAGGAATGCGTGCTGGGTCTCAAGGAACAGGACGATATCATCGCCAAGGTGCAAGCTATCCTGCTTCGTGTGGAGGCGCTTGACCGTCCCGATCTGTCTCTGGAGGCAGCCTACGAAGTACTTGCTGATCTACAGGAGTCTTACCCCTTGGAGTACGAGATGTTTGGCCTAGGTTCCATCGCTGGTAACATCGTCAGTCCTCTACTGAGCGCTCTGCTAGCGCCGTGGCAGCCTTTGGAGGCGCCAGAAGACCCCATCCCTACGTTCCTCAAATGGCGGCCGCTGCTCACTGAAGAGGCCTATACTAGTCTACTGTGGCAGCATTTTGTGCCACACCTTACAACCGCTTCAGAATCCTGGAACCCTCGGGTTCCAGAGCCGATGCTCCGTGCGGTCGGCGCCTGGAACGAAGCCTGCCCTCCCTGGGTTGCTGGAGAGATTATAACAAGATGCGTAGTACCACGCGTACTTGCAACCGTCAGGACTTGGGACCCAACCCATGACACGCAGCCTGTACATTGCTGGGTATTACCCTGGCATGACTTAGCTGGTTCAGCACTAGCAACGAGCGTGTACCCATTGATTCGTTCACGTCTCGCGTCTGCTCTGTCGGCGTGGCACCCCGCCGACGGGTCAGCGCGCGGCGTGTTGGCGGCGTGGCGCGGCGCGTGGCGTGGCGCGCTCACGGCACTCCTTCATCATCACATCGTCCCCAAGCTGGAGCATTGTCTGCATCACTCGCAGATACATCTCGTCGGACAACAGAATACGGCATGGCTCTGGTGTGTTGATTGGCTGGACTTGCTTGGAGCGCCCACCGTGGCGGCTATAGCTAGCCGCGCGCTACTGCCGCGCTGGCTAGCGGCCTTGGCAGCATGGCTCAACGCAAACCCCGCTCACGCTACCGTACTCAACTCTTACACAGAATTCAAGAAAATGTTCCCCGAAGAAGTCCTCAAGGAGCCGGCAGTCCGAGACTCATTCCGCAAAGCCCTGGACATGATGAACCGAAGCACCGACATCGACTCAGTGGAAGCACCCCCTCCTCCACGATTCGGCCCTGTAGAAGCCCCCCCTCCGCCTAGGTTCACCCCTGTCGACCTCAAAGAAACATCCAGGATCGCCGACGCCCTAGCATCCGCCACGCAGCAAAAATCATTCTCAGAACTTCTTGAATCTAGATGTATGGAAAAGGGAATCACCTTTGTGCCCTTAGTTGGCAAGAATAGGGAAGGAAGACCTATTTATAAGATCGGGGACAAACAGTGCTATGTTATAAGGAATGTGATTATGTATTCCGATGACGGGGGCAGAAATTTCGCGCCGATAAGTATAGATAGATTGTTACAAATGGTAGAAGATTAA
- Protein Sequence
- MSDDEVIRFEITDHDLDNEFNFNRPRGRNKKEHQIYGMWAKDSDEEDNEDNIRQRTRKPKDYSAPIGFVMGGVQQAGKKKEEKKELEPTETITASTSRPKLAPDSSDEEKQPSLPAETDTAGIRRKGQGMRPANLGGNVGNWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAALKAKKEEEKRLKEKEEQEKGIAEKSYNWKKSHKGRYFYRDSADVIQEGKPTMHTMASSELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCDHFAAPELAHNLTLMVECCEQDIIQNARELNAAEDEIVVLERDLQECVLGLKEQDDIIAKVQAILLRVEALDRPDLSLEAAYEVLADLQESYPLEYEMFGLGSIAGNIVSPLLSALLAPWQPLEAPEDPIPTFLKWRPLLTEEAYTSLLWQHFVPHLTTASESWNPRVPEPMLRAVGAWNEACPPWVAGEIITRCVVPRVLATVRTWDPTHDTQPVHCWVLPWHDLAGSALATSVYPLIRSRLASALSAWHPADGSARGVLAAWRGAWRGALTALLHHHIVPKLEHCLHHSQIHLVGQQNTAWLWCVDWLDLLGAPTVAAIASRALLPRWLAALAAWLNANPAHATVLNSYTEFKKMFPEEVLKEPAVRDSFRKALDMMNRSTDIDSVEAPPPPRFGPVEAPPPPRFTPVDLKETSRIADALASATQQKSFSELLESRCMEKGITFVPLVGKNREGRPIYKIGDKQCYVIRNVIMYSDDGGRNFAPISIDRLLQMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825754;
- 90% Identity
- iTF_00632770; iTF_01429063; iTF_01219788; iTF_00686360; iTF_00737496; iTF_00119613;
- 80% Identity
- -