Bstr011842.2
Basic Information
- Insect
- Biston stratarius
- Gene Symbol
- sip1
- Assembly
- GCA_950106695.1
- Location
- OX467112.1:4020836-4034705[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-58 2.5e-54 185.2 1.2 4 275 371 624 368 624 0.96 2 2 1 8.6e+03 -3.5 0.0 72 113 635 678 629 679 0.54
Sequence Information
- Coding Sequence
- ATGTCTGACGACGAGGTTATACGTTTTGAAATCACCGACTACGATTTGGACAATGAATTCAACTTTTCAAGGAATCGGAAAGCGAAAAAAGAACACCAAATCTACGGTGTATGGGCTAAAGACAGTGATGAAGAGGACAATGAAGATAATATTCGTCAGAGGACTCGGAAACCTAAAGACTTCTCTGCACCCATCGGTTTCGTGGCAGGAGGTGTTCAACAAGCTggaaagaaaaaagagaaaaaagctaatgAGTTAGAATCTACAGAAGCATCCACATCTCGGCCCAGATTTGCGCCAGATAGTTCTGACGAAGATGAACAACCAGCCAACCCTGATGAGAGCGAGACAGCAGGCATCAGGCGAAAGGGACAGGGGATGCGATCTGCCCATATTGGAGGCAATATGGGGACATGGGAGAAACACACTAAGGGAATAGGTGCTAAATTGTTATTAcagATGGGGTACCAACCTGGGAGAGGTCTGGGCAAGGATTTGCAAGGTATATCGGCTCCCGTGGAAGCAACTGTGAGAAAGGGGAGAGGAGCTATTGGTGCTTATGGACCTGAGAAGGCAGCGATAAAAGCCAAAAAAGAAGAGGAGAAGCGACTGAAAGAGAAAGAAGACCAAGAGAAAGGTGGCACAGAAAAAACGTACAACTGGAAGAAATCCCACAAAGGGCGATATTTCTACCGAGACTCGGCTGACGTCATACAAGAGGGTAAACCCACGATGCATACTGTGGCGAGTAACGAGTTAGCCCGCGTCCCCGTGATAGACATGACCGGGAAAGAGAAGCGAGTACTGAGTGGGTATCACGCGCTGAGAGCAGCCGCGCCGCGGTTCGAACACGAGCCGAGGAGGAAGTGCGAGAACTTCGCCGCTCCGGAGCTCGCTCATAACTTGGCCCTCATGGTGGAATGCTGCGAACAGGATATAATCCAAAACGCTCGCGAGCTCCGAGCGGCAGAAGACGAAATTGTCGTCCTAGAACGAGACCTAGAAGATTGCAACATCAAGTTGGAAGAACATGACGTCGTCATTGGGAAGGTGGAGACAATCTTGCAGAGAGTGGAAGAGCTTAACAAGCCTGACTTGTCACTTGAGGCTGCGTATGAAGTGTTAGCAGATTTGAAGGTAACATACCCATTAGAGTATGAAATGTTTGGCCTGGGCACTATAGCTGGCAGCATTGTAAGCCCACTGCTGAGCGCTTTGCTGGCGCCCTGGCAACCCTTGGAGGCGCCCGAGGAACCCATACCCACCTTCTTGAAATGGAGAAAACTGTTGAGCGACGAGGCTTACAATAGTTTATTATGGCAACACTATGTACCGCATATCACTACTGCAGCcgaGAAATGGAATCCCCGTAACCCAGCGCCCATGGTCCGCGCACTGAGCGCTTGGGCCGAGGCAAGCCCTGGCTGGCTAGTGAAGCAATGTGCTGCCAGATGTATTGTGCCGCGGCTGCTGGAGGCGGCGCGCGGTTGGGACCCCACACACGACACGCAGCCCGTCCACAGCTGGGTGCTGCCCTGGCACGACCTCACAGGCGATGCGCTAGCGACGGCCGTATACCCGTTGATTCGATCCCGCCTGGCGAGCGCGCTGGCGGCGTGGCACCCGGGCGACGGGTCGGCGCGCGGCGTGCTGGGCGCGTGGCGCGGCGCCTGGGGCGCGGCGCTTACAGCGCTACTACACCATCACATCGTGCCGAAGCTCGAGCACTGCCTCCACCACTCGCCGCTAGAACTCGTCGGCAGAGAGAACACGGCGTGGCTGTGGTGTGTGGAGTGGTTAGAGTTGCTGGGAGCGCCGACTGTGGCGGCCATAGCCAGCCGCGCGCTGCTGCCGCGCTGGCTGGCGGCGCTGGCTGCCTGGCTCAACACCAACCCCACGCACGCCACCGTGCTCAACTCTTACACGGAGTTCAAGaaaatgttCCCTGAGGAAGTCCTGAAAGAGCCCGGGGTGCGTGACGCGTTTCGCAAAGCTCTCGACATGATGAACCGCAGCACCGACATAGAGCTCGTGGAGCCGCCGCCGCCTCCGCGGTACACACCTGCACCGCCTTTAGACTTGAAGGACGCCTCGCGTATCGCTGAAGCTTTGGCTTCTGCCTCACAACAAAAGAGTTTCTCCGAGCTCCTGGAATCAAAGTGTGTAATGAAAGGCATCACATTCGTGCCGATCCCAGGGAAGACCAGGGAAGGAAGACCCATCTACAAGATCGGCAATCTCCAGTGTTATGTTATAAGAAACGTAGTGATGTACTCCAACGACGGCGGACGGAACTTCGCCCCTATCGGCATGGATCGACTGTTGAACCTTGTGgatgattaa
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNFSRNRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEKKANELESTEASTSRPRFAPDSSDEDEQPANPDESETAGIRRKGQGMRSAHIGGNMGTWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAIKAKKEEEKRLKEKEDQEKGGTEKTYNWKKSHKGRYFYRDSADVIQEGKPTMHTVASNELARVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCENFAAPELAHNLALMVECCEQDIIQNARELRAAEDEIVVLERDLEDCNIKLEEHDVVIGKVETILQRVEELNKPDLSLEAAYEVLADLKVTYPLEYEMFGLGTIAGSIVSPLLSALLAPWQPLEAPEEPIPTFLKWRKLLSDEAYNSLLWQHYVPHITTAAEKWNPRNPAPMVRALSAWAEASPGWLVKQCAARCIVPRLLEAARGWDPTHDTQPVHSWVLPWHDLTGDALATAVYPLIRSRLASALAAWHPGDGSARGVLGAWRGAWGAALTALLHHHIVPKLEHCLHHSPLELVGRENTAWLWCVEWLELLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLNSYTEFKKMFPEEVLKEPGVRDAFRKALDMMNRSTDIELVEPPPPPRYTPAPPLDLKDASRIAEALASASQQKSFSELLESKCVMKGITFVPIPGKTREGRPIYKIGNLQCYVIRNVVMYSNDGGRNFAPIGMDRLLNLVDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825754;
- 90% Identity
- iTF_00826983;
- 80% Identity
- -