Hpun020773.1
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- sip1
- Assembly
- GCA_949316475.1
- Location
- OX438806.1:8272237-8301977[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-58 6.5e-54 184.8 1.2 4 275 372 625 369 625 0.96 2 2 0.22 5.2e+03 -1.9 0.0 71 114 635 680 629 682 0.62
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAGGTTATACGTTTTGAAATCACCGACTATGATTTGGACAACGAATTCAACTTTACAAGAAATCGTAAAGCAAAAAAGGAGCATCAAATCTACGGTGTATGGGCCAAAGACAGTGATGAGGAAGACAATGAAGACAACATTCGGCAAAGGACTCGCAAGCCCAAAGATTTCTCAGCACCCATTGGGTTTGTCGCAGGAGGGGTGCAGCAAGCTGGCAAGAAAAAAGAAGAGAAGAAAGCTAAAGAGCTGGAAGCAACAGAAGCCTCCACATCTCGGCCCAAGTTTGCACCAGACAGCTCCGATGAAGATGATCAGCCAACCAACCCTGATGAGAGCGAGACGGCCGGCATCAGGCGAAAGGGTCAGGGCATGCGCTCCGCTAATATTGGAGGAAATATGGGGACGTGGGAGAAACATACCAAAGGAATTGGTGCCAAGCTACTGTTGCagATGGGGTACCAACCAGGCAAAGGTCTGGGCAAGGACCTGCAAGGTATATCAGCACCTGTGGAGGCTACTGTGCGGAAAGGCAGAGGTGCTATTGGTGCTTATGGCCCTGAGAAAGCAGCGCAAAAAGCCAAGAGGGAAGAGGAGAAGCGTTTAAAAGAGAAAGAAGAACAAGAGAAGGGCACCACAGAGAAGTCGTACAATTGGAAGAAATCTCACAAAGGGCGGTATTTCTACCGCGACGCCGCCGACGTCATACAAGAAGGCAAGCCTACGATGCATACTGTAGCAACTAACGAGCTGGCCCGCGTGCCCGTGATCGACATGACGGGCAAGGAGAAGCGAGTGCTGAGCGGCTACCACGCCCTGCGGGCCGCCGCGCCGCGGTTCGAGCACGAGCCCCGGAGGAAGTGCGAGAACTTCGCCGCGCCGGAGCTCGTGCACAACCTGGCGCTCATGGTCGAGTGCTGTGAAcagGATATAATCCAAAACGCGCGCGAACTCCAAACGGCAGAAGACGAAATAGTCGTTCTAGAAAGAGACCTAGAAGAATGCAACATCAAGTTAAAAGAACACGATGACGTCATCGGTAAAGTGGAAGCGATATTGCAGCGGGTGGAAGCCTTGAACAAACCCGATATATCCCTAGAGGCTGCTTACGAAGTGCTCGCAGATTTGAAGGAAGCTTTTCCGTTAGAATATGAAATGTTCGGCCTGGGTACTATAGCTGGCAACATCGTGAGTCCGCTACTGAGTGCGTTACTAGCGCCCTGGGAGCCGCTGGACGCCCCTGGAGACCCCATACCTACGTTCTTGAAGTGGAGAAAATTGCTGACCGAAGAGGCGTACAACAGTTTGCTGTGGCAACACTACGTGCCTCATATTACTACTGCTGCTGAGAAATGGAATCCCCGCAACCCAGTACCGATGGTAGAAGCATTAAACGCGTGGGCCGAAGCCAGCCCGGCTTGGCTGGTGAAGCAGTGCGCGGCAAGATGTGTGGTGCCCAGGCTGCTGGAGGCCGCCCGAGGCTGGGACCCCACGCACGACACGCAGCCTGTACACAGCTGGGTGCTGCCCTGGCATGACTTGGCTGGTGATGCGCTAGCTACAGCAGTATACCCACTAATCCGGTCGCGGCTAGCCAGCGCGTTATCCGCGTGGCACCCAGCAGACGGGTCGGCTCGGGGCGTGCTGGGGGCGTGGCGGGGGGCGTGGGGGGCGGCCCTCACTGCCTTGTTACATCACCATATCGTGCCCAAGTTGGAGCATTGCTTACATCACTCGCCGGTGGAACTGGTCGGAAGAGAGAACAcGGCGTGGCTGTGGTGCGTAGACTGGCTGGACCTGCTCGGCGCGCCGACGGTGGCGGCCATCGCCAGCCGCGCATTGCTACCGCGCTGGCTGGCTGCCTTGGCTGCGTGGCTCAACACTAACCCTACGCACGCTACTGTACTCAACTCCTATACGGAGTTTAAGAAAATGTTCCCCGAAGAGGTGCTGAAGGAGCCGGCGGTCCGGGACGCGTTCCGCAAAGCTCTGGACATGATGAACCGGAGCACCGACATCGAGCTGGTGGAGCCCCCGCCGCCGCCCCGCTTCACGGCAGCCCCGCCCCTCGAGCCCATGGACACCTCGCGAATCGCAGACGCTTTGGCTTCAGCCACGCAACAGAAGAGTTTCTCCGAGCTTCTGGAATCTCGATGCGTGATGAAGGGCATCACGTTCGTGCCCCTCGTGGGCAAGAGCAGGGAGGGCCGCCCCATCTACAAGATCGGGGAGATGCAGTGCTACGTCATCAGGAACGTCATCATGTACTCGAACGACGCGGGCAGGAACTTTGCGCCTATCAGCATGGACCGGCTGCTCAAACTTGTGGAAGattaa
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNFTRNRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKAKELEATEASTSRPKFAPDSSDEDDQPTNPDESETAGIRRKGQGMRSANIGGNMGTWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKREEEKRLKEKEEQEKGTTEKSYNWKKSHKGRYFYRDAADVIQEGKPTMHTVATNELARVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCENFAAPELVHNLALMVECCEQDIIQNARELQTAEDEIVVLERDLEECNIKLKEHDDVIGKVEAILQRVEALNKPDISLEAAYEVLADLKEAFPLEYEMFGLGTIAGNIVSPLLSALLAPWEPLDAPGDPIPTFLKWRKLLTEEAYNSLLWQHYVPHITTAAEKWNPRNPVPMVEALNAWAEASPAWLVKQCAARCVVPRLLEAARGWDPTHDTQPVHSWVLPWHDLAGDALATAVYPLIRSRLASALSAWHPADGSARGVLGAWRGAWGAALTALLHHHIVPKLEHCLHHSPVELVGRENTAWLWCVDWLDLLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLNSYTEFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIELVEPPPPPRFTAAPPLEPMDTSRIADALASATQQKSFSELLESRCVMKGITFVPLVGKSREGRPIYKIGEMQCYVIRNVIMYSNDAGRNFAPISMDRLLKLVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825754;
- 90% Identity
- iTF_01209286; iTF_00666551; iTF_00055436; iTF_00390385; iTF_00818356; iTF_00825754; iTF_00895957; iTF_00143081; iTF_00032927; iTF_01208204; iTF_00033820; iTF_00926623; iTF_00207008; iTF_00206086;
- 80% Identity
- -