Tflu020808.1
Basic Information
- Insect
- Tetheella fluctuosa
- Gene Symbol
- sip1
- Assembly
- GCA_951216915.1
- Location
- OX578234.1:7104220-7130117[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-62 2.1e-58 198.8 1.1 2 275 369 624 368 624 0.97 2 2 0.88 8.7e+03 -3.3 0.0 76 270 639 664 629 679 0.44
Sequence Information
- Coding Sequence
- ATGTCGGACGACGAGGTTATACGTTTTGAGATCACCGATTATGATTTGGACAATGAATTTAATCCCAATAGGCCCAGAAGAGCAAAAAAGGAGCAACAAATATACGGTGTATGGGCCAAAGACAGTGATGAAGAGGACAATGAAGACAACATCAGACAAAGAGTTCGAAAACCAAAAGATTTCTCTGCACCTATTGGGTTTGTGGCTGGTGGTGTGCAGCAAGCTGGTAAGAAGAAGGAGGCTGAGAAAAAAGAATTAGAACCGAAAGAAGCATCCACATCCCGTCCAAAGTTTGCACCGGACAGTTCAGATGAGGATGAGCGGCCGGTCATGCCCGATGAGACTGAGACTGCTGGCATCCGGAGACAGGGGCAGGGCATGAGATCAGCAAACCTTGGTGGCAATGTTGGAACATGGGAGAGACATACTAAAGGAATTGGGGCTAAATTGTTGTTACAGATGGGTTACCAACCTGGTAAGGGTCTGGGTAAGGACCTCCAAGGTATATCTGCACCCGTGGAGGCAACTGTCAGAAAAGGAAGGGGAGCTATTGGCGCTTATGGTCCTGAGAAAGCTGCTCAAAAAGCTAAGCGAGAGGAAGAGCTACGCCGTCTGAAAGAGAAGGAAGACGAGAAAGGGCCCACAGAGAAGACCTACAACTGGAAAAAGTCTCACAAAGGCCGCTACTTCTACAGAGACGCCGCCGATGTCATACAAGAGGGTAAACCCACGATGCATACTATTACCAGTAACGAGTTGTCCCGCGTGCCCGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCTCGgggccgccgcgccgcgctaCGAGCACGAGCCCAGGCGCAAGTGCGAGAACTTCACCGCGCCGCAGCTCATGCACAACTTGGAACTTATGGTCGAGTGTTGCGAACAAGATATAATCCAAAATGCTCGCGGACTTCAAACGGCTGAAGACGAAATAGTAGTATTGGAACGAGATCTAGATGATTGCAACATTAAATTACAAGAACACGACAAAGTGATCACTAAAGTGCAGTTGATTATGGAAAGAGTGGAACAACTGAACAAACCTGACATATCTTTGGAGAATGCTTACGAAGTGTTGGCCGatttaaagGAATCATTCCCAATTGAATACGACGTGTTTGATCTCGGTACAGTAGCGGGAAACATTGTCAGTCCTTTACTCAGTGCGTTACTAGCCACGTGGGACCCACTACAGGCACCAGAGGAGCCGATACCGATCTTCCTGAAATGGCGGAAACTGCTTACCGTTGAGAAGTATGATAGTTTGTTGTGGCAACATTACCTGCCCCATATAAGGACGGCTGctgaGACGTGGAACCCCCGCGACCCGTCGCCGATGGTCCGGGCATTGACCTCGTGGGGCGTGGCGTGCCCCGAGTGGGTGCTGTCGCGCTGCGCCGCGCAGTACGTGGTGCCGCGCGTGCTGGCCGCCGTGCGCGAGTGGGACCCCACCGGCGACACGCAGCCGCTGCACGTCTGGGTGCTGCCCTGGCATCATCTCGCAGGTTGCGAGCTGGCGGCGACGGTGTACCCGCTGATCCGCAGCCGGCTGGTGAGCGCGCTGGCGGCGTGGCACCCCGGCGACCCGAGCGCGCGCGGCGTGCTGGGCCCGTGGCGCGCCGCCTGGGGGCCCGCGCTGGCCGCCGTGCTGCACAACCACATCGTGCCCAAGCTCGACCACTGCCTGCACCACGCGCCCATCGACCTCGTCGGCAGGGAGAACACGGCGTGGCTGTGGTGCGTGGAGTGGGTGGAGCTGCTGGGCGCGCCGACGGTGGGCGCCCTCGCCGGCCGCACGCTGCTGCCGCGCTGGCTGGCCGCGCTCGCCGCCTGGCTCAACACCAACCCCACGCACGCTACTGTACTCAACTCCTATACTGACTTTAAGAAAATGTTCCCCGAAGAAGTACTGAAGGAACCAGCGGTCCGTGATGCCTTTCGCAAAGCTCTTGACATGATGAACCGGAGCACAGACATAGATTCCGTGGAACCTCCACCCCCACCACGTTTCACTTACGAACCTAAAGAACCCTCTAAAATCACCGACGTCCTAGCTTCCACAAACCTACAGAAGAGCTTCTCAGAACTTCTTGAATCTAGGTGCATAGAAAAAGGGATTACGTTTGTTCCTATCGTAGGAAAGGTTAGGGAAGGAAGACCCTTGTATAAAATTGGTGATCTTCAATGTTATGTTATAAGGAATGTTATTATGTATTCGAATGATGGCGGGAGGTCGTTTATGCCTATCAGTATGGATAGGCTGTTGAAAATGGTTgaagattaa
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRPRRAKKEQQIYGVWAKDSDEEDNEDNIRQRVRKPKDFSAPIGFVAGGVQQAGKKKEAEKKELEPKEASTSRPKFAPDSSDEDERPVMPDETETAGIRRQGQGMRSANLGGNVGTWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKREEELRRLKEKEDEKGPTEKTYNWKKSHKGRYFYRDAADVIQEGKPTMHTITSNELSRVPVIDMTGKEKRVLSGYHALGAAAPRYEHEPRRKCENFTAPQLMHNLELMVECCEQDIIQNARGLQTAEDEIVVLERDLDDCNIKLQEHDKVITKVQLIMERVEQLNKPDISLENAYEVLADLKESFPIEYDVFDLGTVAGNIVSPLLSALLATWDPLQAPEEPIPIFLKWRKLLTVEKYDSLLWQHYLPHIRTAAETWNPRDPSPMVRALTSWGVACPEWVLSRCAAQYVVPRVLAAVREWDPTGDTQPLHVWVLPWHHLAGCELAATVYPLIRSRLVSALAAWHPGDPSARGVLGPWRAAWGPALAAVLHNHIVPKLDHCLHHAPIDLVGRENTAWLWCVEWVELLGAPTVGALAGRTLLPRWLAALAAWLNTNPTHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIDSVEPPPPPRFTYEPKEPSKITDVLASTNLQKSFSELLESRCIEKGITFVPIVGKVREGRPLYKIGDLQCYVIRNVIMYSNDGGRSFMPISMDRLLKMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825754;
- 90% Identity
- iTF_01083344;
- 80% Identity
- -