Basic Information

Insect: Xanthorhoe designata
Gene Symbol: sip1_1
Assembly: GCA_963582015.1
Location: OY757050.1:7167709-7176889[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-61 3.3e-57 194.8 5.0 3 275 370 625 368 625 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-61	3.3e-57	194.8	5.0	3	275	370	625	368	625	0.95

Sequence Information

Coding Sequence: ATGTCTGACGACGAGGTTATTCGATTCGAAATCACCGACCATGATTTGGACAATGAATTCAACTTCAATAGGCCCCGAGGGAAGAACAAGAAAGAGCATCAGATATATGgcATGTGGGCCAAAGACAGTGATGAAGAAGACAATGAGGATAATGTGCGTCAAAGAACCAGAAAGCCAAAAGATTACTCAGCACCCATTGGTTTTGTTATGGGAGGTGTACAGCAGGCAGGCAAGAAAAAGGAAGAAAAAAAAGAATTAGAATCAACAGAAGCCTCCACCTCCCGACCCAAGTTTGCTCCAGACAGTTCTGATGAGGAAGAGCAGCCGAGCATGCCTTTAGAGAGTGAGACAGCTGGCATCAGGAGAAAGGGACAGGGTATGAGGCAGGCCACTCTGGGCAGCAATGTTGGACACTGGGAGAAACATACTAAGGGTATTGGTGCTAAATTGCTGTTACAGATGGGTTACAAACCAGGTAAAGGTCTGGGTAAGGACCTTCAAGGTATATCAGCACCTGTGGAAGCGACTGTCAGAAAAGGAAGGGGTGCTATTGGAGCTTATGGGCCTGAGAAAGCGGCAcaaaaagcgaaaaaagaagaagagaaaAGGCTAAAAGAGAAGGAAGAGCAAGAGAAAGAGACAACAGAGAAGTCATACAACTGGAAGAAGTCTCACAAAGGGCGCTACTTCTACCGAGACTCGGAAGATGTCATACAAGAGGGTAAACCCACGATGCATACTATGACCAGCAGTTCGTTGGCTCGCGTGCCTGTGATCGACATGACGGGTCGCGAGAAGCGAGTTCTCAGCGGCTACCACGCATTGCGCGCAGCCGCGCCGCGCTTCGAACACGAGCCGCGTCGCAAATGCGAACATTTCGCAGCGCCAGAGCTGGCTCATAATCTGGCTTTGATGGTGGACTGCTGTGAGCAGGACATAATCCAAAACGCCCGGGACCTGACAACAGCAGAGGACGAGATAGTGGTTCTCGAGCGAGACCTGAAGGAATGTGAGATCAACATAGAAGAGCAGGACGAGATTATCGCCAAAGTGCAGGCGATACTGCAGCGAGTGGAGACGCTCAACCGACCGGACTTATCTTTGGAGTCCGCTTATGAAGTGTTGGCTGAGCTGAAGGAATCATATCCAATGGAGTACGAAATGTTCGGTCTCGGTGCAATCGCGGGCAACATCGTCAGTCCACTGCTGAGCGCGCTGCTAGCGCCGTGGCAGCCGCTGGAAGCTCCCGACGAACCCATACCCACCTTCAGAAAATGGCGGCCATTGCTGGCTGACGAGGCCTATACCAGCTTGTTGTGGCAACACTTTGTGCCGCATCTTACTACTGCTTCAGAGGTATGGAACCCGCGAGTCCCAGAGCCAATGCTACGAGCTGTGAACGCATGGAGCGAGGTCTGTCCCCCGTGGGTGGCGAGTGAGGTGCTCACACGGTGCGTGGTCCCGCGCGTGTTAGCCGCCGTGCGGACTTGGGACCCCACACACGACACCCAACCCGTGCATAGCTGGGTGCTGCCGTGGCACGAGCTGGCAGGCGCAGCATTATCGACCAGCGTGTACCCCTTAATCCGTTCCCGTCTATGCTCCGCACTATCCGCCTGGCACCCCAGCGACCCCTCAGCCCGCGGGGTCCTGGGGGCCTGGCGGGGGGCCTGGCCCGGGGCCCTGCCCGCGCTGCTCCAGCATCACGTGGTGCCCAAGTTGGAGCACGCTTTACATCTACATCAAGTCCAGTTATTGCCTGCAGACAATGCCCCGGCGTGGCAGTGGTGCCTGGAATGGATAGAGTTGGTGGGCGCGCCCACTATAGCGGGCATAGCGAGCCGCGCGCTCCTGCCTCGCTGGCTCGCCGCGCTGGCCGCCTGGCTCAACACCAACCCTCCACACGCCACCGTGCTCAACTCTTACACCGACTTCAAGAAAACCTTCCCAGAAGAGATCCTAAGAGAGCCAGTTATCCGTGACGCGTTCCGCAAAGCACTGGACATGATGAACCGAAGCACCGACATCGACACGATCGaacccccgcccccgccccgctTCACCCCTCTCGACCCTAAAGAATCTTCCAGAATAGCCGACGTACTATCCTCTACAAACCAACAGAAATCCTTCTCAGAGCTACTAGAGTCCCGATGCGTGGAGAAAGGGATAACGTTCGTGCCGATGGTCGGGAAGAACAGAGAGGGAAGACCTATTTATAAGATCGGGGATAAGCAGTGCTATGTTATACGGAATGTTATTATGTATTCGGAGGATTCGGGGCGGAATTTCGCGCCGATTGGCATGGATAGGCTGTTGAAGATGGTTGAGGATTAA
Protein Sequence: MSDDEVIRFEITDHDLDNEFNFNRPRGKNKKEHQIYGMWAKDSDEEDNEDNVRQRTRKPKDYSAPIGFVMGGVQQAGKKKEEKKELESTEASTSRPKFAPDSSDEEEQPSMPLESETAGIRRKGQGMRQATLGSNVGHWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKKEEEKRLKEKEEQEKETTEKSYNWKKSHKGRYFYRDSEDVIQEGKPTMHTMTSSSLARVPVIDMTGREKRVLSGYHALRAAAPRFEHEPRRKCEHFAAPELAHNLALMVDCCEQDIIQNARDLTTAEDEIVVLERDLKECEINIEEQDEIIAKVQAILQRVETLNRPDLSLESAYEVLAELKESYPMEYEMFGLGAIAGNIVSPLLSALLAPWQPLEAPDEPIPTFRKWRPLLADEAYTSLLWQHFVPHLTTASEVWNPRVPEPMLRAVNAWSEVCPPWVASEVLTRCVVPRVLAAVRTWDPTHDTQPVHSWVLPWHELAGAALSTSVYPLIRSRLCSALSAWHPSDPSARGVLGAWRGAWPGALPALLQHHVVPKLEHALHLHQVQLLPADNAPAWQWCLEWIELVGAPTIAGIASRALLPRWLAALAAWLNTNPPHATVLNSYTDFKKTFPEEILREPVIRDAFRKALDMMNRSTDIDTIEPPPPPRFTPLDPKESSRIADVLSSTNQQKSFSELLESRCVEKGITFVPMVGKNREGRPIYKIGDKQCYVIRNVIMYSEDSGRNFAPIGMDRLLKMVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00825754;
90% Identity: iTF_01529207; iTF_00267199;
80% Identity: -