Pint013131.1
Basic Information
- Insect
- Plodia interpunctella
- Gene Symbol
- sip1
- Assembly
- GCA_027563975.2
- Location
- CM050481.1:2157355-2169468[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-61 2.2e-57 195.1 3.1 4 275 370 623 367 623 0.96 2 2 0.49 5.3e+03 -3.0 0.0 75 103 637 667 628 678 0.46
Sequence Information
- Coding Sequence
- atgtCTGATGATGAAGTGATACGATTTGAAATCACTGACTATGATTTGGACAATGAATTCAATCCAAACAGAAACCGGCGAGCAAAGAAAGAGCAGCAAATTTACGgtGTATGGGCTAAGGATAGTGATGAAGATGACAACGAAGACAATATCAGGCAAAGAACTCGGAAACCAAAAGACTTCTCAGCGCCCATTGGCTTCGTGGCTGGTGGGGTTCAACAGGCAGGcaagaagaaagaagaaaagaaagAAATACAATCATCTGAAGCTTCCACATCCCGTCCGAAGTTTGCACCAGACAGTTCCGACGAAGATGAGAAGCCAAGTAATCCCGCTGAGAGTGAGACGGCAGGCATTAGAAGAGCAGGACAGGGCATGAGACCAGTTAACTTTGGAGGGAATATGGGGAACTGGGAGAAACACACCAAGGGTATTGGAGCCAAGTTGTTGTTACAGATGGGTTACCAACCAGGTAAAGGTCTGGGCAAAGACCTGCAGGGAATATCGGCGCCAGTAGAAGCGACCCTCAGGAAGGGGAGAGGAGCTATTGGTGCTTACGGGCCGGAAAAATCTGCAcAAAAGGCAAAGAGAGAGGAAGAGAAGCGCCTGAAAGAGAAAGAGGATCAAGAGAAGAGTGCAACAGAGAAATCTTACAACTGGAAGAAGTCGCACAAAGGACGGTACTTCTATAGGGATGCTGCTGACGTCATTCAAGAAGGGAAACCCTCGATGCATACTGTTGTCACCAATGAGTTGTCCCGCGTGCCGGTGATCGACATGACGGGCAAAGAGCGGCGCGTGCTGAGCGGCTACCACGCGCTgcgcgccgccgcgccgcgctTCGAGCACGAGCCGCGGCGTCGGCTGCGGCACTTCGCTGCTACTGCGCTTGCGCACAACCTGCAGCTCATGGTCGACTGCTGCGAACAGGACATAATTCAAAACGCTCGAGAGTTAAAAACAGCAGAAGACGAGATTGTAGTCCTGGAGAGGGACTTAGAAGAGTGCAACATGAAGTTGAAAGAGCACGATGTAGTCATAGACAAAATGCAGGAGATATTGCGGAGAGTGGAGGCTTTGGACAAACCTGATGTTTCTTTGGAAGATGCTTATGAGGTGTTGGCAGAGTTGAAGgaaAGCTTCCCCCTGGAGTACGAAACTTTCGGCCTCGGCACAATCGCGGGCACCATCGTCAGTCCGCTGCTCAGCGCGCTGTTGGCGCCCTGGGACCCGCTCACGGCGCCCGACGAGCCAGTGCAAGTGTTTAGCAAATGGCGCAAGTTGCTCACCGACGAAGCGTATAACAGCTTGCTGTGGCAACATTATGTCCCACATTTGAACACTGCTGCCGAATCGTGGAATCCCCGCGACCCAACGCCTATGTTACGGGCGTTAACGTGTTGGTCAGACGTGTGTCCCCCGTGGATCGTGAGCAACTGGTGCGCCCGCTGCGTGACCCCCCGCCTGCTGGCCGGCGTGCGGGCCTGGGACCCCACGGGGGACACTCTGCCGCTGCACACGTGGGTCTTACCCTGGCACCCTCATAATGGGGAGTCCCTCGCCCGTTCCGTGTACCCCGCCATCCGCAGCCGGCTGGCGTCGGCGCTGGCGGCGTGGCACCCCGCCGACGGCTCCGCTCGGCCGCTGCTGGCCGCCTGGCGCGGCGCCTGGGGCTCCGCCCTCACGGCGCTGCTGCACCAGCACATTGTGCCCAAGCTGGAGCACTGCCTGCAGATGGCGCCTTTGGAGCTCGTCGGCAGGGAAAATGCGGCGTGGCTATGGTGCGTTGACTGGCTGGAGCTGCTTGGCGCTCCTACTGTGGCAGCCATTGCGTCCAGGGCGTTGTTGCCGAGATGGCTGGCAGCGTTGGCGGCATGGCTCAACACAAATCCGACTCACGCCACTGTGCTCAACTCGTACACTGACTTCAAAAAAATGTTCCCCGAGGAAGTATTGAAGGAGCCAGCGGTTCGCGACGCGTTTAGGAAAGCCCTGGACATGATGAACAGGAGCACTGACATCGAGACTGTGGAGCCCCCCCCTCCGCCCCGCTTCACCGTCACAGACACAAAGGAAACGTCTAGAATCGCCGACGTGTTATCTTCGACTACccaacaaaaaagtttttccGAGTTATTAGAATCTAGATGTATAGAAAAGGGGATAACTTTTGTACCTATAGCCGGGAAGACAAGGGAAGGTCGGCCGTTGTATAAGATAGGGGATTTGCAGTGTTACGTTATaagaaatgttattatgtattCCAATGATGGCGGACGGACTTTTGGACCGGTCAGTATGGAGCGACTGCTTAATATGGTTgaagaatga
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEQQIYGVWAKDSDEDDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKEIQSSEASTSRPKFAPDSSDEDEKPSNPAESETAGIRRAGQGMRPVNFGGNMGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATLRKGRGAIGAYGPEKSAQKAKREEEKRLKEKEDQEKSATEKSYNWKKSHKGRYFYRDAADVIQEGKPSMHTVVTNELSRVPVIDMTGKERRVLSGYHALRAAAPRFEHEPRRRLRHFAATALAHNLQLMVDCCEQDIIQNARELKTAEDEIVVLERDLEECNMKLKEHDVVIDKMQEILRRVEALDKPDVSLEDAYEVLAELKESFPLEYETFGLGTIAGTIVSPLLSALLAPWDPLTAPDEPVQVFSKWRKLLTDEAYNSLLWQHYVPHLNTAAESWNPRDPTPMLRALTCWSDVCPPWIVSNWCARCVTPRLLAGVRAWDPTGDTLPLHTWVLPWHPHNGESLARSVYPAIRSRLASALAAWHPADGSARPLLAAWRGAWGSALTALLHQHIVPKLEHCLQMAPLELVGRENAAWLWCVDWLELLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIETVEPPPPPRFTVTDTKETSRIADVLSSTTQQKSFSELLESRCIEKGITFVPIAGKTREGRPLYKIGDLQCYVIRNVIMYSNDGGRTFGPVSMERLLNMVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825754;
- 90% Identity
- iTF_00720307; iTF_00640341; iTF_01302355;
- 80% Identity
- -