Hlin015299.1
Basic Information
- Insect
- Hyles lineata
- Gene Symbol
- retn
- Assembly
- GCA_030180105.1
- Location
- JARJEE010000018.1:2143085-2149944[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 3.6e-16 59.9 0.0 17 89 22 92 5 92 0.93 2 2 7.3 2e+04 -3.4 0.0 26 38 225 237 212 242 0.75
Sequence Information
- Coding Sequence
- ATGTTCTTTTACAACGAGATGTGGGTTCACTGTCGGAGTAATGACTGTAAGAAGATACCAACAAGTACGCCCATCAACCGGCTGCCCATAATGGCCAAGTCAGTGCTGGATCTGTACGAGCTGTACAACCTGGTCATCGCCCGCGGCGGGCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTCCGGCTGCCGTCTTCTATCACTTCTGCAGCTTTCACTTTGCGCACACAATACATGAAGTACTTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCGACCCGTAGCGAGCTGGACGCCGCCATCGAAGGCAACAAGCGCGAGGGTCGCCGAGCCTCGGGGCAATACGACGCGCAGGCGGCCTTGGCTATGCCGCCACTGAACCGCGGGGTGCCAGCGTCCCTAGCCCAGCTGTCCCAGCACATGCAGCCCTTGTCCCTGTCGCTGGGGGGCGGGGTGGGGGTGCCGCGCCTGCCCCCCCTGCCGCCGCACGCACCGCACATTTCGCAGCATGACATCGAGTACCGCGTGCGAGAGTACATGAAGATGATACAGCAGCAACGGGACTTGATGAGGAATGGCTCGGAGTCCCCGCCGGGTGGCAACGGCCCCGCGCCGATGATGTCCCCGCGCGACGCCGCCGCGCTCAGCGCCATCGACGTGTCGCGTCTCACGCTCTGGTCACTctacaacaataacaacaataataacagCCCACAGCCGGACCTTGAGCCGCAACGtgAGGCGCTGAACCTAAGCGAAAGTCCCAACTCTAGCGCCAGCGGTGGCAAGCGCGAGGCGTGCCGCTCCCCCCCTCCCCCTGCGAAGCGGCGCACCCCTCGCCCGCCCTCACCCCGCGCGCCCTCCCCGCCGCGCCAGCCCTGCCCCCCGCCGCACCTCAACGGATCCAGCGCCACTAATGGCGTTCATGGAGCAGCTTTTAAGATTACCACTAGAGGTTTCTTCCTCGGAGAGCTCTTCTGGATCCAGTGA
- Protein Sequence
- MFFYNEMWVHCRSNDCKKIPTSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRDLMRNGSESPPGGNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNNSPQPDLEPQREALNLSESPNSSASGGKREACRSPPPPAKRRTPRPPSPRAPSPPRQPCPPPHLNGSSATNGVHGAAFKITTRGFFLGELFWIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00427878; iTF_01316105; iTF_00277162; iTF_00431914; iTF_00787405; iTF_00960718; iTF_00428784; iTF_01358673; iTF_00859244; iTF_00858329; iTF_01429718; iTF_01436800;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -