Tjap014067.1
Basic Information
- Insect
- Theretra japonica
- Gene Symbol
- retn
- Assembly
- GCA_033459515.1
- Location
- CM065945.1:8783452-8792020[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-20 1.8e-16 60.5 0.0 17 89 13 83 7 83 0.94 2 2 9.1 1.8e+04 -3.5 0.0 26 38 216 228 204 233 0.75
Sequence Information
- Coding Sequence
- ATGGTGGGAAGGTCTGGTGCCTCGTGTATTTCATTTGGTACGCCCATCAACCGGCTGCCCATAATGGCCAAGTCAGTGCTGGATCTGTACGAGCTGTACAACCTGGTCATCGCCCGCGGCGGGCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTCCGGCTGCCCTCCTCTATCACGTCTGCAGCTTTCACTTTGCGCACACAATACATGAAGTACTTGTACGACTACGAGTGCGAGAAGAAAAACCTGTCGACCCGCAGTGAGCTGGACGCCGCCATTGAGGGTAACAAGCGCGAGGGCCGCCGCGCCTCTGGACAATACGACGCGCAGGCGGCGTTGGCTATgCCGCCACTGAACCGCGGGGTGCCAGCATCTTTAGCCCAGCTGTCTCAGCACATGCAGCCGTTATCCCTGTCCCTGGGGGGAGGGGTGGGGGTGCCGCGCCTGCCCCCCctgccgccgcacgcgccgcacatCTCGCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATCCAGCAGCAACGGGACTTGATGAGGAATGGCTCGGAGTCCCCGCCGGGCGGCAACGGCCCAGCGCCGATGATGTCGCCGCGCGACGCGGCCGCGCTCAGCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCTctacaacaacaataacaacaacaacagccCGCAGCCGGACCTTGAGCCGCAACGTGAGGCGCTAAACCTAAGCGAAAGTCCAAACTCGAGCGCCAGCGGGGGCAAGCGCGAAGCGTGCCGCTCTCCCCCTCCCCCTGCCAAGCGGCGCACCCCACGGCCACCCTCCCCGCGCGCGCCCTCCCCGCCGCGCCAGCCTTGCCCACCGCCGCACCTCAACGGATCCAGCGCCACTAATGGCGTTCATGGGGCAGCTTTTAAGATTACCACTAGAGGTGATGCAAGCACAGGCGATCAGCAGCTAGTGGTATCGATAGAACTGAACGGAGTAACGTATGAAGGAGTGCTATTCCCCTCACAAAACGGCAACGGACAGAACGGTCACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MVGRSGASCISFGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRDLMRNGSESPPGGNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNNSPQPDLEPQREALNLSESPNSSASGGKREACRSPPPPAKRRTPRPPSPRAPSPPRQPCPPPHLNGSSATNGVHGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -