Dpor012567.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- retn
- Assembly
- GCA_905220455.1
- Location
- LR999988.1:4646644-4652155[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-21 2.6e-17 63.4 0.0 13 89 1 75 1 75 0.95 2 2 5.4 1.8e+04 -3.4 0.0 26 38 208 220 195 225 0.75
Sequence Information
- Coding Sequence
- ATGCAACAAAATAGTACGCCCATCAACCGGCTGCCCATAATGGCCAAGTCAGTGCTGGATCTGTACGAGCTGTACAACCTGGTCATCGCTCGCGGCGGGCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGACTCCGGCTGCCGTCCTCTATCACGTCTGCAGCTTTTACTTTGCGCACACAATACATGAAGTACTTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCGACACGTAGCGAGCTGGACGCCGCCATCGAAGGCAACAAGCGCGAGGGCCGCCGCGCCTCCGGGCAGTACGACGCGCAGGCGGCGTTGGCTATGCCGCCGCTTAACCGCGGGGTGCCAGCATCACTAGCCCAGCTGTCCCAGCACATGCAGCCTCTATCCTTATCCCTTGGGGGCGGGGTGGGGGTGCCGCGCCTGCCCCCCCTGCCGCCGCACGCGCCGCACATCTCGCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATCCAGCAGCAACGGGACTTGATGAGGAATGGCTCGGAGTCCCCTCCAGGCGGCAACGGCCCCGCGCCGATGATGTCCCCGCGCGACGCGGCCGCACTCAGCGCTATTGATGTGTCCCGCCTCACGCTCTGGTCCCTCTATAACAACAACAACAATAACAACAGTCCGCAGCCGGACCTTGAGCCGCAACGTGAGGCGCTTAACCTAAGCGAAAGCCCTAACTCGAGCACCAGCGGAGGCAAGCGCGAGGCGTGCCGCTCCCCCCCTCCTCCGGCCAAGCGGCGCACCCCGCGGCCGCCCTCCCCGCGCGCGCCCTCCCCGCCGCGCCAGCCCTGCCCGCCGCCGCACCTCAACGGATCCAGCGCCACTAATGGCGTTCATGGGGCAGCTTTTAAGATTACCACTAGAGGTGATGCAAGCACAGGCGATCAGCAGCTAGTGGTATCAATAGAACTGAACGGAGTAACGTATGAAGGAGTTCTATTCCCCTCACAAAACGGCAACGGACAGAACGGTCACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MQQNSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRDLMRNGSESPPGGNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRAPSPPRQPCPPPHLNGSSATNGVHGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -