Sjap019904.2
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- retn
- Assembly
- GCA_033032175.1
- Location
- CM065318.1:12830500-12844847[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-20 1.2e-16 62.0 0.0 16 89 26 97 14 97 0.93
Sequence Information
- Coding Sequence
- ATGCTGCATATCGGCTCCACTCTTCCTCGTAGTCATCTCGCCCTCCTCCTCAACGAGGTGATGGGGAAACTGTTTCAGGGTACGCCTATAAACCGGTTACCGATTATGGCTAAGTCGGTGTTAGATTTATACGAGTTGTATAACTTGGTGATCGCGAGGGGAGGTCTCGTCGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGCCTCCGATTGCCATCGTCCATCACGTCTGCTGCCTTCACATTACGCACACAATATATGAAGTATTTATATGATTATGAATGCGAAAAGAAAAACTTGTCGACTCGCAGCGAGTTAGACGCCGCTATAGAAGGCAACAAACGGGAAGGAAGACGCGCCTCCGGACAATATGACGCACAAGCGGCTCTCGCTATGCCGCCTCTAAGTCGTGGAGTACCAGCCTCTCTGGCCCAGCTGTCACAGCACATGCAGCCGTTGTCGCTGTCGCTCGGCGGAGGTGTGGCAGGAGTGCCACGACTGCCACCGTTGCCACCGCACGGGCCACACATCTCCCAACATGACATCGAATACCGCGTCAGAGAGTACATGAAGATGATACAGCAACAGCGGGAGCTTATGAGGAACGGGTCGGAATCACCGCCGGGCAGTAACGGGCCGACGTCGATGATGTCGCCGCGCGACGCTGCCGCTCTGAGCGCCATCGACGTGTCCCGCCTCACTCTCTGGTCTCTCTACAGCAATAACAACAACAGCAGCCCGCAGCCAGACCTCGAGCCGCAACGAGAGGCTTTAAATTTGAGCGAAAGTCCCAACTCGAGTGCGAGTGGTGGTAAGCGCGAGGCTTGTCGTTCGCCACCGCCGCCGGCGAAGCGCCGCACGCCGCGACCGCCTTCCCCGCTACACCCAATGGCGTCAACGGAGCCGCTTTCAAAATTACCACCAGAGGCGACGCAAGCACAGGCGATCAACAGCTCGGTAGTTTCTATAGAGCTCAACGGGGTAACATATGAAGGAGTACTGTTTCCATCACAAAGCGGCAACGGTCAAAACGGTCACAGGCAAATGGTATCTTAA
- Protein Sequence
- MLHIGSTLPRSHLALLLNEVMGKLFQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHGPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPTSMMSPRDAAALSAIDVSRLTLWSLYSNNNNSSPQPDLEPQREALNLSESPNSSASGGKREACRSPPPPAKRRTPRPPSPLHPMASTEPLSKLPPEATQAQAINSSVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- -
- 80% Identity
- -