Cpal010338.1
Basic Information
- Insect
- Carterocephalus palaemon
- Gene Symbol
- retn
- Assembly
- GCA_944567795.1
- Location
- CALYMS010000132.1:628207-637018[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-20 1.5e-16 60.7 0.0 16 89 15 86 3 86 0.93 2 2 3.4 8.4e+03 -2.6 0.0 25 38 213 226 179 230 0.62
Sequence Information
- Coding Sequence
- ATGGCGAAATTGCTATTGAAAGACATATCGTGCATCCTGCCTCGACGCACACCCATCAACAGGCTGCCGATAATGGCCAAGTCTGTGCTCGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGGCTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTCCGCCTGCCCTCCTCCATCACCTCCGCAGCGTTCACTCTGCGCACGCAATACATGAAGTACCTTTACGACTACGAGTGTGAGAAGAAGAACCTGTCGACCCGCAGCGAGCTGGACGCGGCCATCGAGGGCAACAAGCGCGAGGGCCGGCGCGCCTCTGGCCAGTACGACGCGCAAGCCGCCCTGGCCATGCCGGCCCTGAACCGCGGCGTGCCGGCGTCGCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCtgggcggcgtgggcggcgtgccgcgcctgccgccgctgccgccgcacgcgccgcacgtcACGCAGCACGACATCGAGTTCCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAGCGCGACCTCATGAGGAACGGGTCGGAGTCGCCGCCGAGTGCCGCCATGGTGTCGCCGCGCGACGCCGCTCTCTCCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCtctacaacaacaacaacagcaacaccaacaacaacaacagcCCGCAGCCGGACCTCGAGCCGCAACGGGAAGCACTCAACCTGAGCGAGAGCCCCAATTCAAGCACGAGCGGCAAGCGCGAAGCGTGCCGCTCCCCCCCTCCGCCGGCCAAGCGCCGCACCCCGCGCCCGCCCTCCCCCCGCGCGCCCtccccgcgctcgccgcgcgcgccgccgctcgcgccgcgcgaCCCGCCGCCGCACGTCAACGGCAACGCCAACGGCGTGCACGGCGCCGCCTTCAAGATCACCACCAGAGGTGACGCAAGCACGGGTGACCAGCAGCTGGTGGTCTCGATAGAGCTCAACGGCGTGACGTACGAGGGGGTGTTGTTCCCTTCCCAGGGTAACCAGAACGGACACCGGCAAATGGTCTCTTAG
- Protein Sequence
- MAKLLLKDISCILPRRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPALNRGVPASLAQLSQHMQPLSLSLGGVGGVPRLPPLPPHAPHVTQHDIEFRVREYMKMIQQQRDLMRNGSESPPSAAMVSPRDAALSAIDVSRLTLWSLYNNNNSNTNNNNSPQPDLEPQREALNLSESPNSSTSGKREACRSPPPPAKRRTPRPPSPRAPSPRSPRAPPLAPRDPPPHVNGNANGVHGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQGNQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- iTF_01438679;
- 80% Identity
- -