Spin006861.1
Basic Information
- Insect
- Sphinx pinastri
- Gene Symbol
- retn
- Assembly
- GCA_947568825.1
- Location
- OX387633.1:5839801-5848866[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-20 2.4e-16 60.5 0.0 17 89 14 84 9 84 0.95 2 2 5.6 1.6e+04 -3.0 0.0 25 38 216 229 178 231 0.66
Sequence Information
- Coding Sequence
- ATGGCCTTGACTGACGAGACGAGCATGCCGTTCCCTGATGGCACGCCTATCAACCGGTTGCCGATAATGGCCAAGTCGGTGCTGGACTTGTACGAATTGTACAACCTGGTGATAGCTCGCGGTGGGCTCGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGTTGCCGTCCTCAATCACGTCTGCTGCCTTCACGCTGCGCACACAGTACATGAAGTATTTGTACGACTACGAGTGTGAAAAGAAGAACCTGTCGACTCGCAGCGAGCTGGACGCCGCTATTGAAGGTAACAAACGTGAGGGCAGGCGTGCTTCAGGACAATATGATGCGCAGGCGGCGCTTGCCATGCCGCCGCTGAACCGCGGTGTACCGGCGTCTCTTGCGCAGCTGTCTCAGCACATGCAGCCGTTATCGCTGTCCCTGGGGGGCGGGGTAGGAGTCCCGCGACTCCCCCCACTACCTCCTCATGCGCCACACATCTCCCAGCACGATATAGAGTACCGCGTGCGGGAATATATGAAGATGATACAGCAGCAGCGGGAGTTGATGAGGAATGGTTCTGAATCGCCTCCAGGCAGCAACGGTCCCGCGCCGATGATGTCGCCGCGCGACGCCGCCGCGCTCAGTGCCATCGACGTGTCGCGGCTCACGCTGTGGTCGCTCTACAACAACAACAATAACAACAGCCCGCAACCGGAACTCGAACCGCAACGTGAGGCGCTAAATCTAAGCGAAAGTCCAAACTTGAACGTGAGCATCAAGCGTGAAGCGTGTCGCTCCCCTCCCCCGCCGGCGAAGCGCCGGACCCCGCGGCCGCCCTCCCCCAGGCTACCCTCGCCGCCGCGCCAGGCGTGCATGCCCACAACTCCTCAGTCACAACTCAACGGCGGCAGCGCTACTAATGGAGTCAATGGGGCAGCTTTCAAAATTACTACTCGAGGTGATGCAAGCACAGGCGATCAACAACTCGTCGTATCGATAGAACTGAACGGAGTCACATACGAAGGAGTTCTCTTCCCATCACAGAACGGCAACGGCCAAAATGGTCACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MALTDETSMPFPDGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPELEPQREALNLSESPNLNVSIKREACRSPPPPAKRRTPRPPSPRLPSPPRQACMPTTPQSQLNGGSATNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -