Basic Information

Insect: Harpagoxenus sublaevis
Gene Symbol: -
Assembly: GCA_030770355.1
Location: JASTWR010000155.1:224053-230130[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.2 2.1e+02 4.0 9.7 2 23 293 315 292 315 0.97

2 18 0.045 8.2 8.5 2.2 1 23 363 385 363 385 0.97

3 18 0.36 65 5.6 0.6 1 23 434 456 434 456 0.97

4 18 0.043 7.8 8.5 0.2 1 21 504 524 504 525 0.92

5 18 0.0015 0.28 13.1 0.2 2 23 566 587 565 587 0.97

6 18 0.00064 0.12 14.3 0.3 1 23 634 656 634 656 0.96

7 18 0.00084 0.15 13.9 0.1 1 23 662 684 662 684 0.97

8 18 2.3e-05 0.0042 18.8 0.2 1 23 728 751 728 751 0.96

9 18 0.00055 0.099 14.5 0.5 1 23 757 780 757 780 0.96

10 18 6.2e-06 0.0011 20.6 1.0 2 23 788 810 787 810 0.97

11 18 0.00018 0.032 16.0 0.0 1 23 818 840 818 840 0.93

12 18 0.089 16 7.5 0.3 1 20 900 919 900 919 0.97

13 18 0.0021 0.38 12.7 0.1 2 23 939 960 938 960 0.96

14 18 1.2e-05 0.0021 19.8 0.7 1 23 973 995 973 995 0.97

15 18 0.00028 0.051 15.4 3.0 1 23 1017 1040 1017 1040 0.93

16 18 0.0024 0.44 12.5 1.3 2 23 1101 1123 1100 1123 0.95

17 18 0.00073 0.13 14.1 1.0 1 23 1143 1166 1143 1166 0.93

18 18 0.006 1.1 11.2 0.3 2 23 1260 1282 1260 1282 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.2	2.1e+02	4.0	9.7	2	23	293	315	292	315	0.97
2	18	0.045	8.2	8.5	2.2	1	23	363	385	363	385	0.97
3	18	0.36	65	5.6	0.6	1	23	434	456	434	456	0.97
4	18	0.043	7.8	8.5	0.2	1	21	504	524	504	525	0.92
5	18	0.0015	0.28	13.1	0.2	2	23	566	587	565	587	0.97
6	18	0.00064	0.12	14.3	0.3	1	23	634	656	634	656	0.96
7	18	0.00084	0.15	13.9	0.1	1	23	662	684	662	684	0.97
8	18	2.3e-05	0.0042	18.8	0.2	1	23	728	751	728	751	0.96
9	18	0.00055	0.099	14.5	0.5	1	23	757	780	757	780	0.96
10	18	6.2e-06	0.0011	20.6	1.0	2	23	788	810	787	810	0.97
11	18	0.00018	0.032	16.0	0.0	1	23	818	840	818	840	0.93
12	18	0.089	16	7.5	0.3	1	20	900	919	900	919	0.97
13	18	0.0021	0.38	12.7	0.1	2	23	939	960	938	960	0.96
14	18	1.2e-05	0.0021	19.8	0.7	1	23	973	995	973	995	0.97
15	18	0.00028	0.051	15.4	3.0	1	23	1017	1040	1017	1040	0.93
16	18	0.0024	0.44	12.5	1.3	2	23	1101	1123	1100	1123	0.95
17	18	0.00073	0.13	14.1	1.0	1	23	1143	1166	1143	1166	0.93
18	18	0.006	1.1	11.2	0.3	2	23	1260	1282	1260	1282	0.94

Sequence Information

Coding Sequence: ATGGACGAGGACGTGGTGGAGATGGTGGAGATGGTCGAGTCCAGGAACGTGGAGAACGTCTGCAGACTGTGCCTTTCCGCGGACGGGCCTAGATCCTCGGTGTTCGAGACGCAGGAGGATGAGGAGAAGGACTCGTCCGGCGTGCCGCTGGCCGCCAAGATTCAGGCCTGTCTGTCGATCCAGattacagCAACTGATAGGTTGTCCACGCTGATATGCGAAAATTGCGTGAAGAGCGTTAATCAATGGCACATCTACAAGGAGTCGTGTCTGCGTTCCCAGGACAAGCTGCAAGAATGGCTGGCAAATCAAATGCAATCAAATCCTAAgGTTGTCACGATCAAGGATGAACCAATGGACCTTGACGAAGATAATGTAGAAATTATCTCAGAGACCACCAATAATTTGGAGCAACCACATTCACCAATTCGAACAGTGGAAAAGGATGGATGTAATAGTGAGAAAGGTCAAGATGTAACAGATAACACCGATGCAAATGATACTAACGAAGAACCTGAACCTGAACGAATCGCATCTGATCCTGAACCTGAACCAATCGCATCTGATCCTGAACCAATCCCATCTGCGGTCGAAAAGGAGCTTGATAAGAAAGAAAGTAAAACGGATAAGCAGAGTTCTGTAACTCTGTGTTCCATTAAAAGCGAGCCACAGGAGGAAGACGATACTCATAGTACTATAGAAGTGGAATCCACGAATAGCAGTGAAATATTGAATCCCATGGCAGTCAGCGGGACAGAGGACACGATCATGGAGGCCGATTCCACGCAGAGGTCTAACGTGGCTGGCGCACCATCTAAGAAGAAGTTAAGACGCGGTCCTCACACTCATTTTAGAGGAACGCGTGTTTTTAAGCAGAAGTGTCATCACTGCCAGATATTCCTGCACTCCAAGTACACGTACATGAAGCACATGAAGAGGTTCCACAGTAAACAAAACGGCATTGAAAATTCAGGGTCACagaacgacgacgaggagaTTGAAGATTTGGAAGATGAACTGATCAGCATGGAAAAGGACTCACCGCTGACGCAAGTCCAACAGGACATTATTAGTCAGCTGAAAACCTTTTCTTGCTACTCTTGCGAACAGACGTTTAATGATCGACGCAGCACTCTCTCTCACATACGTCAACATATGCCGGATTTGAGACCATATACATGTATCGCCTGCCTGACGGAGTTTCCAGATCGATCGATGTATCAGTTGCACTGTGGAGCTTCCTTCGAGTGCGCCATGAAGATCGCCCTAGTTGTACCGAAACACGGTAACGAACAATACTTTACATGCAACATGTGCCTGCGCTCGATGCCTGGTAGGAAGGAGTTGCTCAGCCACTTGTCGAAGCACTCTGACAAACAGTACGAGGAGATGATGTCACCAACGCGAGCTCCGCCCAAGCTGAAGCCGATGGCGCCGTTGCCgtcgaaaaataaaaatcgcgATAAGATCATTAACGGGCCTTACAAGAACGGCGATCCGGCGCATAATCATGCCTGCGATCTGTGCGGTATGATCTATCGATACCAACCTAACATGGTCAAGCACAAACAGATGTGCATGCGATTGGATCCGGAAAGCAGAGTGCTGTACAGATGCGTGCATTGTTACATGACTTTCCTCGTGTTCAAGAAGTTCCATTATCACGTCACGGCCGACCACAAGAAGAAGAATGTTACTTGTTCCGAATGCTACGCCGAATTCCGATCGCCCAGTGATTTCTTGACCCATTACGAGACCCATCGCGCAACAATGCAGGCCAATCGACAAATGCAGCACGACGGTACCTCGCAGAATGCAGTCCAAGCGCCATTGAAGGAACGCAACGCTTATGAAACAAATGTCAAGTCAAGAATCAGTTCGCGAATATCAAGTCAGAAGTATAGCTGCCCCCTTTGTGCCGAGAAGTTCTCCACGAGGGTCGAGCTGAACGAGCATCGGACTCTCCATCTCAAAGTGAAGATATACTCGTGTGTCATTTGCCGCAGTATGTTCAGCAGCGCCGGTGCCTTGGAGATACACATGAAGGACCACGGTATCGAGGACCCGAACGAGAGGAACGCCAACGTTTCCTGCATGGAATACGGCAGCTTGGACGAAGATGTGAGAATCGAGAAAGATTCGATGAATGCTAGTGCCACCTCGGATCCAGGTACCCAGATTCACGAGTGTGGCGAGTGCGGTAAGGTACTGTCCAGTTACGCTAATCTCCGGCGACATGCTAAAATTGCTCACCGGAACTGTAAGATGTACGATTGTGTCGAGTGCTCGCGTATGTTCATGCGTAAAGATCTGTATGAGCAGCATATGTTAGTTAAACATAACTCTACGAAGACAATGCTGCAGTGTCCGCAATGCCCTAAGAGTTTCGTCTTCCAATCAAACTTCACTTATCACTTCCGTACCGCCCATCTCGAAAAATCGCAAAATGGTTATGCCTGCGACATCTGCGGCAAGGTCTTCGTCGAGGAAGCATCTTTGAAAATACACAGGGGCTGGCACAACCGTGCAAACTCGCGTCTTAGCACTCGATTTATACTGGGGAATCAGAAAGTGTCTAACGACCCGCAGAAAGAATCTAATAGCGTTGAGTCTGGTGAGAATTCAGAACGACCGGCGAGAGCACGAAAGTCCTTCCCAAATCCTCCACCTCAATCGCCAACGAAGACATCAGGGAGTTTCCAATGTCAAGTATGCAATGACAAGTTCAACGATGTCACAGAGCTGAGGACCCATCTGTGGGACGTCCACTGCGCTCGTAACAAGGCGGAGAAAAGTTTCTCCAACGACGATCTTCAATGCGAACTCTGCACGAACATTTTCCCCGATCAGGAGACCCTGGCATCTCATATGCAATGGCACAAGGCCAATCCGATTCTCAGCGACATACAAAAGGCGTTCGCCTGCGATATATGCGGCAAGTCTTACAGTTCGAAGAAGGTTCTGTGGAAGCACAAAAGGCTTCACAAGGCTACGGTTGTGGCCTCGCTCAAGTTCCAATCTTTAGCCAGAAAACCGATGGCCACACAGTTCCTGTGCAACTTTTGCCGCAAGGTCTTCTCGAGCAACCAGTCTCTGCAGCGTCACAAACTTTCCTTCCACAGTGGTGAATCACTGAACCAACAGCGGGCGCAACAACAACTATACAACAGCAATCGAACCTCGTCGTACGAGGACGAGCCGAAAGCGAAGCGTTTGAAGTTCGAGATCGAAAATGACAATTCGCAGGCCAAGCTATCGCCTTTCGCAATGGACTTCGCCGGTGAGAGAAGGAAGCCAGTCATGTGCCACGTATGCAAGAAAATGTTCCCCAATATGAGCGTGCTGTACAAGCACAAGCAAATGGTCCATAAAGCCCGAAAAGGGCTGGTGCCCGAATGCATTCCGATGTCGACTCAGGATGGCAAGTTTTCATGCAACATCTGCTTCAAGGAATTCCCCGGTCTGTCGAATCTGCGACAGCATTTTACGATCAAGCACAAGAAGACGGCAGCTGCCGAAGCCGGCAACACATCGAGCAATGAGAGATTGGTGCTCCCGACACCGACTAAGGTACCCGAACGGCCAAAGGAATTTGAAGTGTCCTACAATAACGTGATGTACAGTTGCAAGCTGTGCAAGCAGTGCCACGTCTTCAATAAGGAGTCCATCATGAGCCATATCACTAATGTGCACAACACAGTGTACCAGGCCGACAGCAAGACGTTCCATAGAGAGACCAATCTGAGCACTTACGTAGTGAAGGACGCGATCGGAGCTACTTGCCCGCAATGTGACGTCAAGTATCCTAATAACAGGGCTCTGAAGATACACTATGTTAAATTCCACGATGATACCGATTAA
Protein Sequence: MDEDVVEMVEMVESRNVENVCRLCLSADGPRSSVFETQEDEEKDSSGVPLAAKIQACLSIQITATDRLSTLICENCVKSVNQWHIYKESCLRSQDKLQEWLANQMQSNPKVVTIKDEPMDLDEDNVEIISETTNNLEQPHSPIRTVEKDGCNSEKGQDVTDNTDANDTNEEPEPERIASDPEPEPIASDPEPIPSAVEKELDKKESKTDKQSSVTLCSIKSEPQEEDDTHSTIEVESTNSSEILNPMAVSGTEDTIMEADSTQRSNVAGAPSKKKLRRGPHTHFRGTRVFKQKCHHCQIFLHSKYTYMKHMKRFHSKQNGIENSGSQNDDEEIEDLEDELISMEKDSPLTQVQQDIISQLKTFSCYSCEQTFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYQLHCGASFECAMKIALVVPKHGNEQYFTCNMCLRSMPGRKELLSHLSKHSDKQYEEMMSPTRAPPKLKPMAPLPSKNKNRDKIINGPYKNGDPAHNHACDLCGMIYRYQPNMVKHKQMCMRLDPESRVLYRCVHCYMTFLVFKKFHYHVTADHKKKNVTCSECYAEFRSPSDFLTHYETHRATMQANRQMQHDGTSQNAVQAPLKERNAYETNVKSRISSRISSQKYSCPLCAEKFSTRVELNEHRTLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANVSCMEYGSLDEDVRIEKDSMNASATSDPGTQIHECGECGKVLSSYANLRRHAKIAHRNCKMYDCVECSRMFMRKDLYEQHMLVKHNSTKTMLQCPQCPKSFVFQSNFTYHFRTAHLEKSQNGYACDICGKVFVEEASLKIHRGWHNRANSRLSTRFILGNQKVSNDPQKESNSVESGENSERPARARKSFPNPPPQSPTKTSGSFQCQVCNDKFNDVTELRTHLWDVHCARNKAEKSFSNDDLQCELCTNIFPDQETLASHMQWHKANPILSDIQKAFACDICGKSYSSKKVLWKHKRLHKATVVASLKFQSLARKPMATQFLCNFCRKVFSSNQSLQRHKLSFHSGESLNQQRAQQQLYNSNRTSSYEDEPKAKRLKFEIENDNSQAKLSPFAMDFAGERRKPVMCHVCKKMFPNMSVLYKHKQMVHKARKGLVPECIPMSTQDGKFSCNICFKEFPGLSNLRQHFTIKHKKTAAAEAGNTSSNERLVLPTPTKVPERPKEFEVSYNNVMYSCKLCKQCHVFNKESIMSHITNVHNTVYQADSKTFHRETNLSTYVVKDAIGATCPQCDVKYPNNRALKIHYVKFHDDTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01422403; iTF_01421732; iTF_01423102; iTF_01423839; iTF_01405963; iTF_01408481; iTF_01407592; iTF_01409401; iTF_00885336; iTF_00385787;
90% Identity: iTF_00885336;
80% Identity: -