Basic Information

Insect: Tetramorium immigrans
Gene Symbol: -
Assembly: GCA_011636585.1
Location: VBVO01002895.1:6184-11486[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.29 37 5.6 7.5 2 23 277 299 276 299 0.97

2 18 0.036 4.5 8.5 2.2 1 23 348 370 348 370 0.97

3 18 1.1 1.4e+02 3.8 1.1 1 23 419 441 419 441 0.97

4 18 0.064 8.1 7.7 0.2 1 21 489 509 489 510 0.92

5 18 0.0052 0.65 11.1 3.2 1 23 550 572 550 572 0.98

6 18 0.00036 0.045 14.8 0.3 1 23 620 642 620 642 0.96

7 18 0.00054 0.068 14.2 0.1 1 23 648 670 648 670 0.97

8 18 1.9e-05 0.0023 18.8 0.2 1 23 714 737 714 737 0.96

9 18 0.017 2.2 9.5 2.7 1 23 743 766 743 766 0.95

10 18 2.2e-06 0.00027 21.8 1.0 2 23 774 796 773 796 0.97

11 18 0.00021 0.026 15.6 0.0 1 23 804 826 804 826 0.93

12 18 0.18 23 6.3 0.2 1 20 886 905 886 905 0.96

13 18 0.0017 0.21 12.7 0.1 2 23 925 946 924 946 0.96

14 18 4.3e-06 0.00053 20.9 1.2 1 23 959 981 959 981 0.98

15 18 0.00028 0.035 15.2 3.0 1 23 1003 1026 1003 1026 0.93

16 18 0.0064 0.8 10.9 0.7 2 23 1089 1111 1088 1111 0.92

17 18 0.00058 0.073 14.1 1.0 1 23 1132 1155 1132 1155 0.93

18 18 0.0011 0.14 13.2 0.1 2 23 1243 1265 1243 1265 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.29	37	5.6	7.5	2	23	277	299	276	299	0.97
2	18	0.036	4.5	8.5	2.2	1	23	348	370	348	370	0.97
3	18	1.1	1.4e+02	3.8	1.1	1	23	419	441	419	441	0.97
4	18	0.064	8.1	7.7	0.2	1	21	489	509	489	510	0.92
5	18	0.0052	0.65	11.1	3.2	1	23	550	572	550	572	0.98
6	18	0.00036	0.045	14.8	0.3	1	23	620	642	620	642	0.96
7	18	0.00054	0.068	14.2	0.1	1	23	648	670	648	670	0.97
8	18	1.9e-05	0.0023	18.8	0.2	1	23	714	737	714	737	0.96
9	18	0.017	2.2	9.5	2.7	1	23	743	766	743	766	0.95
10	18	2.2e-06	0.00027	21.8	1.0	2	23	774	796	773	796	0.97
11	18	0.00021	0.026	15.6	0.0	1	23	804	826	804	826	0.93
12	18	0.18	23	6.3	0.2	1	20	886	905	886	905	0.96
13	18	0.0017	0.21	12.7	0.1	2	23	925	946	924	946	0.96
14	18	4.3e-06	0.00053	20.9	1.2	1	23	959	981	959	981	0.98
15	18	0.00028	0.035	15.2	3.0	1	23	1003	1026	1003	1026	0.93
16	18	0.0064	0.8	10.9	0.7	2	23	1089	1111	1088	1111	0.92
17	18	0.00058	0.073	14.1	1.0	1	23	1132	1155	1132	1155	0.93
18	18	0.0011	0.14	13.2	0.1	2	23	1243	1265	1243	1265	0.96

Sequence Information

Coding Sequence: ATGGACGAGGACGTGGTGGAGATCCGGAACGCGGAAAACGTCTGCAGACTGTGCCTTTCCACGGACGGGCCTAGGTCCTCGGTGTTTGACAAGCAGGAGGACGGGGAGAAGGACTCCGGCGTGCCGCTGGCCGCCAAGATTCAGGCCTGCCTGTCGATCCACattttaacaACCGATAAATTGTCTACACTGATATGCGAAAGTTGCGTGAAAAACGTTAATCAATGGCATACCTATAAGGAGTCTTGTCTCCGCACTCAGGATAAGCTGCAAGAATGGCTAGCAAATCAATTGCAATCAAATCCTacgGTTATCACGATCAAGGATGAACCATTGGATGAACCAATGGATGTAGATTATGAAGATAATGTGGAGATTATCTCAGAGATCACcaataatgtagaaaaatcaCAATCACCAATTCAAACAGTAGAGGATAACATTAGAAACGAATCTAATACTGAGAAAGTGCAAGATGTAGCAGATAACAATGATGCAAATGATACTAACAAAGAGACATGTGAGACAGACTCACTTACAGTGGAAAAGGAGACTGACAAGGAAGAAAATCAAACGGATCAACAGGATTCTGTAGCTTTGTGTTCAATTAAAAGCGAACCACAGGATGATGGCGATATCGATACTATAGAAATCGAATCCTCGAACAGTAGTGAGTTGCTATTGAATCCTATGGCAACCAGCGGGACAGAAGATACAATCATGGAAGCCGATTCCACGCAGAAGTCTAATGCGACCGGCTTACcagctaaaaagaaattgagacGTGGTCCTCACACTCATTTTAGAGGAACGCGTGTTTTTAAGCAGAAATGTACGCACTGCCAGATATTCCTGCACTCTAAGTACTCTTACATGAAGCACATGAAGAGATTTCACAGTAAACAAAACGGTATCGAAAATTTGGAGCAGAACGATGACGAAGAGGAGATGATTGAAGATCTAGAAGATGAACTGGTCAGCATGGAAAAGGACTCATCGCTGACACAAGTCCAACAGGACATTATTAGTCAACTGAAAACTTTCTCTTGCTACTCTTGCGAACAGACGTTCAACGATAGACGCAGTACTCTATCTCACATACGTCAACATATGCCGGATTTGAGACCGTACACGTGTATCGCTTGTCTGAGCGAATTTCCAGATCGATCAATGTATCAGTCACATTGCGGCGCGTCCTTCGAATGCGCCATGAAGATCGCCTTAGTGATACCGAAATACGGTAGCGAACGGTACTTTACATGCAACATGTGTTTGCGCTCGATGCAAGGTAGGAAGGAGTTGCTCAGCCACTTATCGAAGCACTCTGACAAACAGTACGAAGAGATGATGTCGCCAATGCGAGCACCGCCAAAACTGAAGCCAATGGCGCCATTGCCACCGAAAAACAACCTTTCTGATAAGATTATGAGCGGACCCTACAAGAACGGCGATCCGGCGCACAATCATGCCTGCGACCTGTGCGGTATGATTTACCGATACCGGCCCAATATGCTCAAGCACAAGATGCTTTGCATGCGAGTAGATCCGGAAAACAGAACGTTGTACAGATGCGTACATTGTTTCATGACGTTCATCGTGTTCAAGAAGTTCCACTATCACGTCACGGCCGAACATAAGAAGAAGGATTTTACTTGTTCCATATGCTTTTCCCAATTTCGTTCGCCCAGTGACTTCCTGACCCATCATGAGACCCATCGCACGACAATGCAAGATAATCGACAAATGCAGCATGATGATATCTCGCAGAATGTTCAAGAAGCTGCACCACTGAAGGAACGCAATGCATACGAAACAAATGCCAAGTCGAGAATCAGCTCGCGAATGTCAAATAAGAAGTACAGTTGTCCTCTTTGCGCCCAGGAGTTCTCCACAAAAGACGAGCTGAACGAGCATAAGACTCTCCATCTCAAAGTGAAGATATACTCGTGTGCCATTTGTCGTAGTATGTTCAGCAGTGCCGGCGCCTTGGAGATTCATATGAAGGATCACGGAATCGAGGATCCGAATGAAAGAAACGCCAATATTTCCTGCGTGGAATACGGCAGCTTGGACGAAGACGTGAGGATCGAGAAAGATGTGATGAATGCTAGTTCCATCTCGGATCCTGGTACGCAAGCTCATGAGTGTGGCGAGTGCGGTAAGGTGCTATCAAGTTACGCTAATCTTCGGCGACATGCTAAGATCGCTCATCGGAATTGTAAGATGTACGATTGTGTCCAGTGCTCACGTATGTTTATGCGTAAAGATTTGTACGATCATCATATGCAGCTGAAGCACAACTCTACCAAGACAATGCTACAGTGTCCGCAATGCCCCAAGAGTTTCGTCTTCCAATCAAATTTCACCTCTCACTTCCGTACTGCCCATGTTGAGAAATCGCAGAATGGTTATGCCTGCGACATCTGCGGCAAAGTCTTCGAAGAGGAAGCTTCTTTGAAAATACACAGAGGCTGGCACAATCGTGCAAACTCGCGTCTGAATACTCGATTCATACTAGGTAATCGGAAGACGTCCAATAGCGCGCAGAAAGAACCAAGTAATGTCGAGTTAGGTGAGAATTCAGAACGGCCAGCGAGAGCACGGAAGTCTTTCCCTAATCCTCCACCTCAATCGCCAGTGAAGACATCGGGAAATTTCCAGTGTCAAGTATGCAATGACAAATTTAACGATGTTATCGAGCTAAGAACCCATCTATGGGACGTCCACTGCGCCCGTAACAAAGCGGAGAAAAGTTTTACCAATGATGAGCTTCAATGCGAACTCTGCACAAACATTTTCCCCGATCAGGAAACTCTGGCATCTCATATGCAATGGCACAAGGACAATCCTATTCTTAGCAACATACAAAAGACATTCACCTGCGAGATATGCGGCAAATCTTACAGTTCGAAGAAGGTTCTATGGAAGCACAAGAGGCTTCACAAGGCTACGGTTGTAGCCTCGATCAAGTTCCAGTCTTTAGCCAGAAAACCGATGGCCTCACAATTTCTGTGCACCTTTTGCCGTAAAGTCTTCTCGAGCAGCCAGTCTCTGCAACGGCACAAACTTTCCTTTCACAGTGATTTACAGCTACAGAACCAACAACGCGCTCAGCAACAATTATACAACAGCAATCGAGCATCGTCGTTTGAGGACGAGCCGAGACCAAAGCGCTTAAAGTTCGAGGTCGATTACAGTGATAATTCGCAGGCCAAGTTGTCGCCTTTCGCCATGGACTTTGCCGGTGAGAAAAGGAAACCGGTCATGTGTCACGTTTGCACGAAAATGTTCCCCAATATGAGCGTGCTGTACAAGCATAAGCAAGCGGTCCACAAGCCTCGTGTAAAAAAAGACGTGCCCGAATGCATTCCGATGTCGACTCAGGATGGCAAGTTTTCATGCAACATCTGCTTCAAGGAATTTCCCGGTCTGTCGAATCTGCGACAGCATTTCACGATCAAACACAAGAAAACATCCGAAACCGTTAGCATGCCGAGAAATGACAGAGTGGAGCTTCCGTCACCCGAACGACTAAAGGACTACGATTCGTACTACAATAACGTGATGTACAGCTGCAAGTTGTGCAAGCAGTGTCACGTCTTCAATAAAGAGTCCATCACGAGCCACATCACCAATGTGCACAACGCAGTGTATCAGGCCGACAGTAAGACGTTCCATAGGGAGACCAATCTGAGCACTTACACAGTGAAGCACGCGATCGGAGCTACTTGTCCGGAATGTGACGTGAAATATCCTAATAACAGAGCTCTGAAGATACACTATATTAAGCTCCACGAGAATGCCGATTAA
Protein Sequence: MDEDVVEIRNAENVCRLCLSTDGPRSSVFDKQEDGEKDSGVPLAAKIQACLSIHILTTDKLSTLICESCVKNVNQWHTYKESCLRTQDKLQEWLANQLQSNPTVITIKDEPLDEPMDVDYEDNVEIISEITNNVEKSQSPIQTVEDNIRNESNTEKVQDVADNNDANDTNKETCETDSLTVEKETDKEENQTDQQDSVALCSIKSEPQDDGDIDTIEIESSNSSELLLNPMATSGTEDTIMEADSTQKSNATGLPAKKKLRRGPHTHFRGTRVFKQKCTHCQIFLHSKYSYMKHMKRFHSKQNGIENLEQNDDEEEMIEDLEDELVSMEKDSSLTQVQQDIISQLKTFSCYSCEQTFNDRRSTLSHIRQHMPDLRPYTCIACLSEFPDRSMYQSHCGASFECAMKIALVIPKYGSERYFTCNMCLRSMQGRKELLSHLSKHSDKQYEEMMSPMRAPPKLKPMAPLPPKNNLSDKIMSGPYKNGDPAHNHACDLCGMIYRYRPNMLKHKMLCMRVDPENRTLYRCVHCFMTFIVFKKFHYHVTAEHKKKDFTCSICFSQFRSPSDFLTHHETHRTTMQDNRQMQHDDISQNVQEAAPLKERNAYETNAKSRISSRMSNKKYSCPLCAQEFSTKDELNEHKTLHLKVKIYSCAICRSMFSSAGALEIHMKDHGIEDPNERNANISCVEYGSLDEDVRIEKDVMNASSISDPGTQAHECGECGKVLSSYANLRRHAKIAHRNCKMYDCVQCSRMFMRKDLYDHHMQLKHNSTKTMLQCPQCPKSFVFQSNFTSHFRTAHVEKSQNGYACDICGKVFEEEASLKIHRGWHNRANSRLNTRFILGNRKTSNSAQKEPSNVELGENSERPARARKSFPNPPPQSPVKTSGNFQCQVCNDKFNDVIELRTHLWDVHCARNKAEKSFTNDELQCELCTNIFPDQETLASHMQWHKDNPILSNIQKTFTCEICGKSYSSKKVLWKHKRLHKATVVASIKFQSLARKPMASQFLCTFCRKVFSSSQSLQRHKLSFHSDLQLQNQQRAQQQLYNSNRASSFEDEPRPKRLKFEVDYSDNSQAKLSPFAMDFAGEKRKPVMCHVCTKMFPNMSVLYKHKQAVHKPRVKKDVPECIPMSTQDGKFSCNICFKEFPGLSNLRQHFTIKHKKTSETVSMPRNDRVELPSPERLKDYDSYYNNVMYSCKLCKQCHVFNKESITSHITNVHNAVYQADSKTFHRETNLSTYTVKHAIGATCPECDVKYPNNRALKIHYIKLHENAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765843;
90% Identity: iTF_01423102; iTF_01423839; iTF_01421732;
80% Identity: -