Tuni004410.1
Basic Information
- Insect
- Temnothorax unifasciatus
- Gene Symbol
- -
- Assembly
- GCA_030770225.1
- Location
- JASTWK010000053.1:459352-464912[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.3 2e+02 4.0 9.7 2 23 356 378 355 378 0.97 2 18 0.047 7.5 8.5 2.3 1 23 426 448 426 448 0.97 3 18 0.39 62 5.6 0.6 1 23 497 519 497 519 0.97 4 18 0.047 7.4 8.5 0.2 1 21 567 587 567 588 0.92 5 18 0.0048 0.77 11.6 2.9 1 23 628 650 628 650 0.98 6 18 0.00013 0.021 16.5 0.3 1 23 703 725 703 725 0.98 7 18 0.00091 0.14 13.8 0.1 1 23 731 753 731 753 0.97 8 18 1.9e-05 0.003 19.1 0.2 1 23 797 820 797 820 0.96 9 18 0.0011 0.17 13.6 0.9 1 23 826 849 826 849 0.96 10 18 6.7e-06 0.0011 20.6 1.0 2 23 857 879 856 879 0.97 11 18 0.00033 0.052 15.2 0.0 1 23 887 909 887 909 0.92 12 18 0.097 15 7.5 0.3 1 20 968 987 968 987 0.97 13 18 0.0023 0.36 12.6 0.1 2 23 1007 1028 1006 1028 0.96 14 18 1.6e-05 0.0025 19.4 1.2 1 23 1041 1063 1041 1063 0.98 15 18 0.0003 0.048 15.3 3.0 1 23 1085 1108 1085 1108 0.93 16 18 0.00084 0.13 14.0 2.3 2 23 1169 1191 1168 1191 0.96 17 18 0.00079 0.12 14.0 1.0 1 23 1211 1234 1211 1234 0.93 18 18 0.0039 0.61 11.9 0.2 2 23 1328 1350 1328 1350 0.96
Sequence Information
- Coding Sequence
- ATGGACGAGGACGTGGTGGAGATGGAGATGGAGTTCGGGAACGTGAAGAACGTCTGCAGACTGTGCCTTTCCGCGGACGGGCCTAGATCCTCGGTGTTCGCAACGCAGGAGGACGAAGAGAAGGAGGACTCGTCCGGCCACCGCGTGCCGCTGGCCGCCAAGATTCAGGCTTGCCTGTCGATCCAGatttcagCAACCGACAGGTTGTCCACATTGATATGCGCAAATTGCGTGAAGAGCGTTAATCAATGGCACACCTACAAGGAGTCGTGCCTGCGTTCCCAGGACAAACTGCAAGAATGGCTGGCAAGTCAGTTGCAATCAAATCCTCcgGTTATTCCAATATTTACGATCAAGGATGAACCAATGGACTTTGACGAAGATAATAATGTAGAATTTATCTCAGAGGTCACCAATAATGTGGAGCAACCACATTCACCAATTCAAACAGTGGAAAACGATGAATGCACTAGTGAGAAAGTGCAAGAAGTAACGAATAACAGCGATGCGAAAGTACAAGAAGTAACAAATAAGAGCGATGCGACAGCACAAGAAGTAACAAATAACAGCGATGCGACGGTACAAGAAGTAACAAATAACAGCGATGCGACGGTACAAGAAGTAACAAATAACAGCGATGCGACAGTACAAGAAGCAACAAATAACAGCGATGCGACAGTACAAGAAGTAACAAATAACAGCGACGCGACAGTACAAGAAGTAACAAATAACAGCGATGATACTAACAAAGATCCTGAACCAGTCCCATCTGCGGTGGAGAAGGAACCTAAtaaggaagaaaataaagcGGATCAGCAGGATCCTGTAGCTCTGTGTTCCATTAAAAGCGAGCCACAGGATGAAGACGATACCTATAGTACTATAGAAGTAGAATCCACGAATAGCAGTGAGTTGCTGTTGAATCCTATGGCAGCCAGCGGGACAGAGGACACGATCATGGAGGCCGATTCCACGCAGAGGTCTAACGCGGCCGGCGGACCGCCCAAGAAGAAATTGAGACGCGGTCCTCATACCCATTTTAGAGGAGCGCGCGTTTTTAAGCAGAAGTGCCATCACTGCCAGATATTCCTGCACTCCAAGTACACGTACATGAAGCACATGAAGCGGTTCCACAGTAAAGAAAACGGCATTGACAATTCGGGATCGCAAAACGACGACGAGGAGATTGAAGATGTGGAAGATGAACTGATTAGCATGGAAAAGGATTCACCGCTGACGCAAGTCCAACAGGACATTATTAGTCAGCTGAAAACATTCTCTTGTTACTCCTGCGAACAGACGTTTAACGATCGACGCAGCACTCTCACTCACATACGTCAACATATGCCAGATTTGAGACCGTATACATGTATCGCCTGCCTAACGGAGTTTCCAGATCGATCGATGTATCAGTTACATTGTGGAGCTTCCTTCGAGTGCGCCATGAAGATCGCCCTAGTTGTACCGAAACATGGTCACGAACAATACTTTACGTGCAACATGTGCCTGCGCTCGATGCCTGGTAGGAAGGAATTACTCAGCCACTTGTCCAAGCATTCTGACAAACAGTACGAAGAGATGATGTCGCCAACGCGAGCTCCGCCCAAGCTGAAACCGATGGCGCCGTTGCCATCGAAAAATAACCTTCCCGATCGGATCATTAAAGGACCTTACAAGAACGGCGATCCGGCGCATAATCATGCCTGCGATCTATGCGGCATGATCTATCGATACCAGCCCAATATGGTCAAGCACAAGCAGATGTGCATGCGATTAGATCCGGAAAGCAGAGTCCTGTACAGATGCGTACATTGTTACATGACGTTCCTCGTGTTTAAGAAATTCCACTACCACATCACGGCCGACCATAAAAAGAAGGATTTTACTTGTTTCATATGCTTTTCCGTATTTCGATCGCCGAGTGATTTTCTGACACATCACGAGACTCATCGCTCAACAACaccaacaacaacaacaacgcAGGCTAATCGACAAGTGCAACACGACGATACCTCGCAGAATGCAGCTCAAGCGCCATTGAAGGAACGCAACGCTTACGAAGCAAATGTCAAGTCGAGAATCAGTTCGCGAATATCAAGTCAGAAGTATAGCTGTCCCCTTTGTGCCCAGACATTCTCCACGAGGGTCGAGCTGAACGAGCATCGGAATCTCCATCTCAAAGTGAAGATATATTCGTGCGTCATTTGCCGCAGTATGTTCAGCAGCGCCGGCGCCTTGGAGATACATATGAAGGATCACGGCATCGACGACCCGAACGAGAGAAACGCCAATGTTTCCTGCATGGAATACGGCAGCTTGGACGAGGACGTGAGGATCGAGAAAGATTCGGTGAATACTAGTGCCATCTCGGATCCTGGTCCGCAGATTCACGAGTGTGGCGAGTGCGGTAAGGTGCTATCCAATTACGCTAATCTCCGGCGACATGCTAAAATCGCTCACCGAAACTGTAAGATGTACGATTGTACCGAGTGCTCGCGTATGTTCATGCGTAAAGATCTGTATGATCAACATATGTTAATTAAACACAACTCCACGAAGACAATGCTGCAGTGTCCGCAGTGCCCTAAGAGTTTCGTCTTCCAATCAAATTTCACTTATCATTTCCGTACCGCCCACCTCGAGAAATCGCAGAACGGTTATGCCTGCGACATCTGCGGCAAGGTCTTCGTCGAGGAAGCGTCATTGAAAATACACAAGGGCTGGCACAACCGTGCAAACTCGCGTCTCAGCACTCGATTCATACTCGGCAATCAAAAGGCGGCCAACGGACCGCAGAAAGAATCTAGTAGCGTCGAGTCTGGTGAGAATTCAGAACGACCGGCGAGAGCACGGAAGTCTTTCCCAAATCCTCCACCTCAGTCACCGTCGAAATCGGGAAGTTTCCAATGTCAGGTATGCAATGACAAATTCAACGATGTCACGGAGCTGAGGACCCATCTGTGGGACGTCCACTGCGCTCGTAACAAGCCGGAGAAGAGTTTCTCCAACGACGATCTTCAGTGCGAACTCTGCACGAACATTTTCCCCGATCAGGAGACCCTGGCATCTCATATGCAATGGCACAAGGCCAATCCCATTCTCAGCGACATACAAAAGACATTCTCCTGCGACGTGTGCGGCAAGTCTTACAGTTCGAAGAAGGTTCTGTGGAAGCACAAGAGGCTTCACAAGGCTACCGCTGTGGCATCGATCAAATTCCAATCCTTAGCCAGAAAACCGATGGCCACACAGTTCCTGTGCAACTTTTGCCGCAAGGTCTTCTCGAGCAATCAGTCTCTGCAACGGCATAAACTTTCCTTCCACAGTAGCGAATCGCAGAACCAACAGCGCGCGCAGCAACAACTGTATAACAGCAATCGAATATCGTCCTACGAGGACGAGCCAAAAACGAAGCGCATGAAGTTCGAGCTCGAAAGTGAAAATTCGCAGGCCAAGCTGTCGCCTTTCGCCATGGACTTCGCCGGTGAGAGAAGGAAGCCAGTCATGTGCCACGTTTGCAAGAAAATGTTCTCCAATATGAGCGTGCTGTACAAGCACAAGCAAACAGTCCATAAACCCCGTAAAAAAGACTTGCCCGAATGCATTCCGATGTCGACTCAAGATGGCAAGTTTTCATGCAACATCTGCTTCAAGGAATTCCCCGGTCTGTCGAATCTGCGACAGCATTTCACGATCAAGCACAAGAAGACGGCAGCTGCCGAAGCCGGCAGTGCGTCGAGAAATGACAGACTGGTGCTCCCGACACCGGTCAAGACACCCGAACGGCCAAGGGAATTCGAAGTGGCCTACAATAACGTGATGTACAGCTGCAAGCTGTGCAAGCAGTGCCACGTCTTCAATAAGGAGTCCATCATGAGCCATATCACCAATGTGCACAACACAGTGTACCAGGCCGACAGCAAGATGTTCCATAGAGAGACCAATCTGGGCACTTACACAGTGAAGGACGCGATCGGAGCTACTTGCCCGCTATGTGACGTCAAGTATCCTAATAACAGAGCTCTGAAGATACACTATATTAAATTCCACGACGATGCTGATTAA
- Protein Sequence
- MDEDVVEMEMEFGNVKNVCRLCLSADGPRSSVFATQEDEEKEDSSGHRVPLAAKIQACLSIQISATDRLSTLICANCVKSVNQWHTYKESCLRSQDKLQEWLASQLQSNPPVIPIFTIKDEPMDFDEDNNVEFISEVTNNVEQPHSPIQTVENDECTSEKVQEVTNNSDAKVQEVTNKSDATAQEVTNNSDATVQEVTNNSDATVQEVTNNSDATVQEATNNSDATVQEVTNNSDATVQEVTNNSDDTNKDPEPVPSAVEKEPNKEENKADQQDPVALCSIKSEPQDEDDTYSTIEVESTNSSELLLNPMAASGTEDTIMEADSTQRSNAAGGPPKKKLRRGPHTHFRGARVFKQKCHHCQIFLHSKYTYMKHMKRFHSKENGIDNSGSQNDDEEIEDVEDELISMEKDSPLTQVQQDIISQLKTFSCYSCEQTFNDRRSTLTHIRQHMPDLRPYTCIACLTEFPDRSMYQLHCGASFECAMKIALVVPKHGHEQYFTCNMCLRSMPGRKELLSHLSKHSDKQYEEMMSPTRAPPKLKPMAPLPSKNNLPDRIIKGPYKNGDPAHNHACDLCGMIYRYQPNMVKHKQMCMRLDPESRVLYRCVHCYMTFLVFKKFHYHITADHKKKDFTCFICFSVFRSPSDFLTHHETHRSTTPTTTTTQANRQVQHDDTSQNAAQAPLKERNAYEANVKSRISSRISSQKYSCPLCAQTFSTRVELNEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIDDPNERNANVSCMEYGSLDEDVRIEKDSVNTSAISDPGPQIHECGECGKVLSNYANLRRHAKIAHRNCKMYDCTECSRMFMRKDLYDQHMLIKHNSTKTMLQCPQCPKSFVFQSNFTYHFRTAHLEKSQNGYACDICGKVFVEEASLKIHKGWHNRANSRLSTRFILGNQKAANGPQKESSSVESGENSERPARARKSFPNPPPQSPSKSGSFQCQVCNDKFNDVTELRTHLWDVHCARNKPEKSFSNDDLQCELCTNIFPDQETLASHMQWHKANPILSDIQKTFSCDVCGKSYSSKKVLWKHKRLHKATAVASIKFQSLARKPMATQFLCNFCRKVFSSNQSLQRHKLSFHSSESQNQQRAQQQLYNSNRISSYEDEPKTKRMKFELESENSQAKLSPFAMDFAGERRKPVMCHVCKKMFSNMSVLYKHKQTVHKPRKKDLPECIPMSTQDGKFSCNICFKEFPGLSNLRQHFTIKHKKTAAAEAGSASRNDRLVLPTPVKTPERPREFEVAYNNVMYSCKLCKQCHVFNKESIMSHITNVHNTVYQADSKMFHRETNLGTYTVKDAIGATCPLCDVKYPNNRALKIHYIKFHDDAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765843;
- 90% Identity
- iTF_01408481; iTF_01405963; iTF_01407592;
- 80% Identity
- -