Dgau014449.1
Basic Information
- Insect
- Drosophila gaucha
- Gene Symbol
- retn
- Assembly
- GCA_035045545.1
- Location
- JAWNOY010000375.1:2833455-2842328[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-26 5.9e-23 81.2 0.0 2 89 20 105 19 105 0.96 2 2 1.9 4e+03 -1.6 0.2 20 38 267 290 233 306 0.52
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATAATGGCCAAATCTGTGCTGGATCTATATGAGCTATACAATCTGGTGATAGCACGCGGCGGCCTTGTCGATGTTATCAACAAGAAGCTGTGGCAGGAGATTATCAAGGGACTGCATTTGCCATCGAGCATCACCAGTGCCGCCTTCACGTTGCGTACCCAATACATGAAGTATTTGTACCCTTACGAGTGCGAGAAGAAGAACCTCAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCACTGACTCCCATTTCGCGACCTCCGCTGCCTGGTGGCATGCAACAGATGTCGCCCTTGGCACTGGTCACGCACGCCGCGGCGGCCAACAATCAGCAGGcgcaggcagcggcagcggccgcAGCAGCGCACCGCCGACTGATGGGCGGGCCGGCGTTTGGCCAGATGCCCAATCTGGTGACGCAGGAGATCGAGAATCGTATGATGGAGTATCTGCAGCTTATACAGGCCAAGAAGGAACAGAGTGCGGGTCCAGTGCTGGGTGCCACACACaatcaccagcagcagcagcagcaacatcaacagcagcaacagtcgctgcACCttcaccaacagcagcagcagcaacagcaacagcagcagcgacaacgcTCCCAAAGCCCAGAGCTCAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTGTGGCATATGTATCACAACAGTAGTCCAACCGGTTCGGCGCACACCTCACCCCAGCAACGTGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTCTCAATTTGAACCACATAAAACGTGAACGTGAACGCGATCCTACGCCGGAGCCGACGGATCATGATGAGACACCGCACCAGCCGCCACCAGCGAAGAGGGTGGGCAGTGGTTTGATGCCGCCCGGGTTTCCCGCAAACTTCTATTTGAATCCACACAACATGGCCGCCGTGGCAGCTGCCGCGGGCTTCCATCACCAggcgaacagcaacagccatcATCatctgcatcagcagcagcagcaacaggacgCAGCGTCCGACGGCGAGCCAGAGGATGACTATGGCAATGCGGAGCACAATACTACCGGCAATTCCTCGTCCATGCATGACGACAGCGAGCCGCAGCAGCTGAACGGGCACCATCACGAcgaccaccaccaccaccaccatcatcatcatcagaaTCATTTGGACAAGTCAGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACCACGGCGTCGGCATCGGGCGGCCATCGTCACAGCTCGCCAGTGTCTACCAAGAAAAAGAGCGTGGCCAGCAAGGCGCAGTCCAGTCCCAAGGACACACAGCACGACAACTGTACagccggcggcagcagcagcgggggCATAGGTGGGGGAGGCGGCGTCAAGCTTAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCGAACggcgagcagcagctgattgTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCATGCTGGTGGCCAATGCAACCGGGCCAGAGCACAACGAGGACCCCGACCCGGACACAGACCCAGCTACACCCACCGTGGCCGCGGGCGGAGTCGAGGAGCCATCGCACGGGGAGGCcagcaatgcggctgcacacGAGAGTAGCCAGGAAGTCAGCCAGAACGAGGCAAACGACGAGGAGACGCAACAGCCCACAGATGACATTATCAACGGGGGTAGTGGGGCCGTGggagtgggcgtgggcgtgggtaTAGGAGTGGGTGTGGGGTCGCTGTTAAAAGATGCTGTAGCCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAGPVLGATHNHQQQQQQHQQQQQSLHLHQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDHDETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHHHLHQQQQQQDAASDGEPEDDYGNAEHNTTGNSSSMHDDSEPQQLNGHHHDDHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSVASKAQSSPKDTQHDNCTAGGSSSGGIGGGGGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGMLVANATGPEHNEDPDPDTDPATPTVAAGGVEEPSHGEASNAAAHESSQEVSQNEANDEETQQPTDDIINGGSGAVGVGVGVGIGVGVGSLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00516036; iTF_00551365; iTF_00573096; iTF_00545001; iTF_00559274; iTF_00472844; iTF_00597933; iTF_00530737; iTF_00540146; iTF_00613970; iTF_00476403; iTF_00532150; iTF_00495642; iTF_00544250; iTF_00520412; iTF_00508884; iTF_00509598; iTF_01555904;
- 90% Identity
- -
- 80% Identity
- -