Dmer016253.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- retn
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000171.1:13932189-13941906[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-26 6.5e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 0.56 1.3e+03 0.1 0.4 7 47 255 301 238 314 0.66
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGACGATTTGTTTTCGTTTATGCAAAAGCGCGGCACACCCATCAATCGGCTGCCCATCATGGCCAAATCGGTGCTGGATCTGTATGAACTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGCGCCGCCTTCACGCTGCGCACACAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTCCAAGCGGCCATCGATGGCAATCGGCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCGCTGACTCCCATCTCGCGTCCTCCGCTGCCTGGTGGCATGCAACAGATGTCGCCTCTGGCTCTGGTCACACACGCCGCGGCGGCCAACAATCAGCAGGcgcaggcagcggcagcagccgccgcagcgcACCGCCGACTGATGGGCGGGCCGGCGTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCCAAGAAGGAGCAGAGCGCCAATCCCGTGCTGGCTGCCACACACAatcaccaacagcagcagcagcaacagcagcagcagcaacatcaacagcagcagcagcagcagtcgctgcatcatcaccagcagcagcagcagcagcggcagcgctcCCAGAGCCCAGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCACATGTATCACAACAGCAGTCCAAACGGTTCGGCGCACACCTCACCACAGCAGCGCGAAGCTTTGAACCTTTCCGATTCGCCGCCAACTTTGAATCTGAATCACATAAAACGTGAGCGGGAACGCGATCCGACGCCGGAGCCAACGGATCAGGATGAGGCACCACATCAGCCACCACCAGCGAAACGTGTGGGCAGCGGCCTGATGCCGCCCGGTTTTCCCGCCAACTTCTATTTGAATCCACACAATATGGCCGCTGTGGCAGCCGCCGCAGGCTTCCATCACCAggcgaacagcaacagccatcATCAtctgcaccagcagcagctgcagcagcagcaacagcaacagcaacaggacgCAGCGTCCGACGGCGAGCCAGAGGATGACTACGGCAATGCTGAGCACAATACTACCGGCAATTCCTCGTCCATGCATGACGACAgcgagccgcagcagctgaacGGCCATCACGAGCTCGACCATCATCACCACCaccttcatcatcatcatcaccatcagaATCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACCACGGCGTCCGCCTCGGGCGGCCATCGTCACAGCTCGCCGGTCTCCACCAAGAAGAAGAGCGCAGCCGGCAAGGCACAGTCCAGTCCCAAGGACAGCAGCACagccggcggcagcagcgcggGCAACGGAGGAGGTGGTGGGAGCAGCGagggcggcggtggcggcgtcAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAACGGCGAGCAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATGCCGGTGCGGGCGGGTTGGCGCCTCGTGACGACCCCGACCCAGACACCGATGCAGTTGGGGCGCCCGTTGCAGCGGCAGACGGAGGCGCCAGCGAAGAGCCAGCGCTcgagcaggaggcggcggcCAACGACAGCGGGCAGGAAGTGGGCCAGCAGGAGGCaaacgaggaggaggaggaggtgcAGCCAGCTGAAGACATTGTCAATGGAGGCAGTGGggatgtgggcgtgggcgtggacatgggcgtgggcatgggcttaggtgtgggtgtgggcgtAGCTGTGGGCTCGCTGCTGAAAGATGCTGTAGCCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSANPVLAATHNHQQQQQQQQQQQHQQQQQQQSLHHHQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDQDEAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHHHLHQQQLQQQQQQQQQDAASDGEPEDDYGNAEHNTTGNSSSMHDDSEPQQLNGHHELDHHHHHLHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSAAGKAQSSPKDSSTAGGSSAGNGGGGGSSEGGGGGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAGAGGLAPRDDPDPDTDAVGAPVAAADGGASEEPALEQEAAANDSGQEVGQQEANEEEEEVQPAEDIVNGGSGDVGVGVDMGVGMGLGVGVGVAVGSLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512501;
- 90% Identity
- iTF_00545001;
- 80% Identity
- -