Dham004035.1
Basic Information
- Insect
- Drosophila hamatofila
- Gene Symbol
- retn
- Assembly
- GCA_035045345.1
- Location
- JAWNPA010000012.1:16175530-16186190[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-26 6.6e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 0.44 9.9e+02 0.4 0.4 7 47 257 302 231 315 0.70
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACACCGATTAATCGGCTGCCCATCATGGCCAAATCGGTGCTGGATCTATATGAACTATATAATCTGGTGATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGCGCCGCCTTCACGCTGCGCACACAATACATGAAGTATTTGTACCCATACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGACGGCAATCGACGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCGCTGACACCCATTTCGCGAGCTCCTCTGCCTGGGGGCATGCAACAGATGTCGCCCTTGGCTCTGGTCACACATGCCGCGGCCGCCAACAATCAGCAGGcgcaggcagcggcagcagccgccgcagcgcACCGCCGACTGATGGGCGGGCCGGCGTTTGGTCAGATGCCGAATCTGATGACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAATGCTAATCCTGTGCTGGCTGCCACACAcaatcaccagcagcagcagcagcagcaacaacaacagcagcagcagcaacatcaacagcagcagcaacagtcgctgcatcatcaccagcagcagcagcagcgacagcgctCCCAGAGCCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCACATGTATCACAATAGCAGTCCAAACGGTTCGGCGCACACCTCACCACAGCAGCGCGAAGCTTTGAACCTTTCCGATTCGCCGCCAACTCTGAATCTGAATCACATAAAACGTGAACGCGAACGCGATCCGACGCCGGAGCCTGCGGATCAGGATGAGGCTACGCACCAGCCGCCACCAGCGAAACGTGTTGGCAGCGGCCTGATGCCGCCCGGTTTTCCCGCCAACTTCTATTTGAATCCACACAACATGGccgctgtggcagctgccgcCGGCTTCCATCACCAggcgaacagcaacagccatcATCAtctgcaccagcagcagcagcaccagctgctgcagcagcaacaggacgCAGCGTCCGACGGTGAGCCAGAGGATGACTATGGCAATGCTGAGCACAATACCACCGGCAATTCCTCGTCGATGCACGACGACAgcgagccgcagcagctgaacGGTCATCATGACCTCGaccatcatcaccatcatcatcatcatcaccatcagaATCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACCACAGCGTCAGCATCGGGCGGCCATCGTCACAGTTCGCCGGTCTCCACCAAGAAGAAGAGCACAGCCGGCAAGGCACAGTCCAGTCCCAAGGACACGCAGCACGACAGCTGCACAGCTGTGGGCGGcggcaccaccagcagcagcagcgagggtggaggcggcagcggcggtgtAGGCGGCAGTGGCGTCAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAATGGCGAGCAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATCCAGGCGAGCGCCAGCGtcacaacggcaacggcaacggcaacgacgacgacgatgatgacgacgacaacgactcCGACCCCGTGCCAGATGCCGTTGCAGTTGCGGCGCCCGCTGCAGCCGCGGAAGCAGGCGGCGCCAGCGAGGAGCCAGCGCCGGAGGAGGCCAACGCGAGTGGCCAGGAAGTGGGCCAGAATGAGGCAAACGACGTGGAGGCGCAGTCAACTGAAGACATTGTCAATGGGAGTGGGGGTGGGGGCGTAGGTTtaggtgtgggcgtggctgtggggTCGCTGTTAAAAGATGCTGTCGCCAGTTCGTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRAPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQNANPVLAATHNHQQQQQQQQQQQQQQHQQQQQQSLHHHQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQDEATHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHHHLHQQQQHQLLQQQQDAASDGEPEDDYGNAEHNTTGNSSSMHDDSEPQQLNGHHDLDHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSTAGKAQSSPKDTQHDSCTAVGGGTTSSSSEGGGGSGGVGGSGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANPGERQRHNGNGNGNDDDDDDDDNDSDPVPDAVAVAAPAAAAEAGGASEEPAPEEANASGQEVGQNEANDVEAQSTEDIVNGSGGGGVGLGVGVAVGSLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512501;
- 90% Identity
- iTF_00551365;
- 80% Identity
- -