Dsor010581.1
Basic Information
- Insect
- Drosophila sordidula
- Gene Symbol
- retn
- Assembly
- GCA_035047465.1
- Location
- JAWNPQ010000186.1:824501-834373[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-26 5.4e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 1.3 2.5e+03 -1.2 0.1 20 39 261 287 207 303 0.61
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTATGAAATCAACGATGATCCCAAGCGCAAGGAGTTCCTCGACgatttgttttcgtttatgCAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATTATGGCTAAATCGGTGCTGGACCTGTACGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAAAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCGTCCAGCATCACCAGCGCCGCCTTCACGCTGCGTACCCAATACATGAAGTATCTGTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTCCAGGCGGCCATTGATGGCAACCGGCGTGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCGCGGCCACAGCTGCCCGGTGGCATGCAGCAGATgtcgccgctggcgctggTCACGCACGCCGCGGCGGCCACCAACCAGCAGGCGCAggcggcggccgcggcggcggcggcgcaccGCCGGCTGATGGGCGGCCCGGCTTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATCGAGAACCGGATGATGGAGTACCTGCAGCTGATACAGGCCAAGAAGGAGCAGAGCGGGCCCGTGCTGGGCGCCACGCAcacccaccagcagcagcagcagcagcagcagcaacagtcgctgcaccaccaccagcagcagcagcagcagcagcagcagcagcggcagcgctcGCAGAGTCCCGAGCTGAGCACGCGCGACGCGCTGAGTGCGCAGGTGGCGCTGTGGCACATGTACCACAACAGCAGTCCAACCGGTTCGGCGCACACCTCGCCGCAGCAGCGCGAAGCCCTGAACCTCTCCGATTCGCCGCCGACTCTCAACTTGAACCACATCAAACGGGAACGCGAACGCGATCCGACGCCGGAGCCGGCGGACCAGGAGGAGACTACGCAccagccgccgccggcgaAGCGTGTGGGCAGCGGCCTGATGCCGCCCGGTTTCCCCGCCAACTTCTACTTGAATCCACACAACATGGCCGCCGTGGCGGCCGCCGCGGGCTTCCATCACcaggccaacagcaacagccacctgaaccaccatcaccaccagcagcagcagcaacagcagcagcagcaacagcaacagcagcaacagcagcagcaggatgcGGCCTCCGACGGGGAGCCGGAGGATGAGTACGCCAATGCGGAGCACAATACCACCGGCAATTCCTCGTCCATGCACGAGGACATGGAGCCGCCGCAGCTGAACGGAcaccatcatcaccatcacGAGGAGCACCATGAccaccaccatcatcatcaccatcagaATCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACCTCCACaacggcgtcggcgtcgggcGGCAATCGCCACAGCTCGCCGGTGTCCACCAAGAAGAAGGGCGCCAGCGCGAAGGAAGACAAcgccggcagcggcgtcggcagcggcagcggcagcgacggcggcgttGGCGGGGGCAGCAGCGGAGGGGGATTGGCCGGCATCAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCCAAcggcgagcagcagctgattgTCAATCTGGCCCTGAATGGCATTAAGTACTCGGGTGTGCTGGTGGCCAATGCGACCCGGCCGGCGCGCACCGCGGACGCCGACACGCCCAACGTCGCCGTCAGCGCCGCGGAGCTGGCGAACCACGACCGggaggaggacgacgacgaagaggaggaggaggaggcggaggcggaggcggtgGCGGAGGCCAAGCGAGAAGCCGCCCAGAACGAGGCCAACGACGAGGACACGCAGCAGCCCACGGATGACACTGCTGCCAATGGAGGCGGCCTGGGGGGCGGGGTCGCGGGCGGGGGCAACGGAGGAGGCGTGGGCGTATCCCTGCTGAAGGATGCTGTGGTCAGCTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPQLPGGMQQMSPLALVTHAAAATNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSGPVLGATHTHQQQQQQQQQQSLHHHQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQEETTHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHLNHHHHQQQQQQQQQQQQQQQQQQQDAASDGEPEDEYANAEHNTTGNSSSMHEDMEPPQLNGHHHHHHEEHHDHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGNRHSSPVSTKKKGASAKEDNAGSGVGSGSGSDGGVGGGSSGGGLAGIKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLALNGIKYSGVLVANATRPARTADADTPNVAVSAAELANHDREEDDDEEEEEEAEAEAVAEAKREAAQNEANDEDTQQPTDDTAANGGGLGGGVAGGGNGGGVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512501;
- 90% Identity
- -
- 80% Identity
- -