Zlin018601.1
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- retn
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000705.1:283248-294153[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-26 6.2e-23 81.2 0.0 2 89 20 105 19 105 0.96 2 2 0.66 1.2e+03 0.1 0.2 8 45 248 289 235 302 0.64
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTATGAAATTAATGATGATCCCAAGCGAAAGGAGTTCCTCGatgatttgttttcatttatgcaAAAACGCGGCACGCCCATCAATCGCCTGCCCATAATGGCGAAGTCTGTTCTGGATCTATATGAACTATATAATCTGGTGATCGCACGGGGCGGACTCGTGGATGTCATCAACAAGAAGCTTTGGCAGGAGATCATCAAGGGACTGCATCTGCCTTCGAGCATCACCAGTGCTGCATTTACGCTCCGCACACAATACATGAAGTATTTGTACCCATATGAATGCGAGAAGAAGAATCTCAGCACACCGGCGGAGCTGCAGGCGGCCATTGATGGCAACCGCCGCGAAGGACGCCGTTCCAGCTATGGTCAATATGAGGCTATGCACAATCAGATGCCGCTGACTCCTATTTCGCGACCACCGATGCCgggtggcatgcaacaaatgTCGCCACTGGCACTGGTCACACACGCCGCAGCGGCTAATAATcaacaggcacaggcagcagcagccgctgcagcagcgcaCCGCCGACTGATGGGTGGTCCAGCGTTCGGTCAGATGCCGAATCTGGTGACACAAGAGATTGAGAATCGCATGATGGAATATCTTCAGCTAATGCAGGCCAAGAAGGACCAGGGTGGCCCAGTCCTGGGCGCCACACATccccaccagcagcaacagcagcagcagcagcagcaacaacaatcgctccaccatcaccagcaacagcaacggcagcgctCCCAAAGCCCCGAGCTGAGCACGCGCGACGCACTGAGTGCGCAGGTAGCCCTGTGGCACATGTATCACAACAGCAGTCCAACCGGTTCGGCACACACCTCACCACAGCAACGCGAAGCGTTGAACCTCTCAGATTCGCCGCCGAATATTCATTTGAACCACATAAAACGCGAACGTGAACGTGATCCAACGCCGGAGCCGGTGGATCATGAGGACTCCCCACACCAGCCACCGCCAGCTAAACGTGTGGGCAGCGGTCTAATGCCTCCCGGATTTCCTGCAAACTTCTATTTAAATCCACACAACATGGCAGCtgtggccgctgctgctggattTCATCATCaggcaagcagcaacagccatcatcatcatcaccagcagcaacaggatgCTGCATCGGAAGGCGAACCAGAGGATGACTATGGAAATGCGGAGCACAATACCACAGGCAATTCGTCGACTATGCATGACGACAATGAGCCACAGCAGTTGAATGGACACCACCAcctccatcatcatcatcatcatcatcataaccAGAATCATTTGGACAAGTCCGATGATTCGGCCATTGAGAACTCACCTAGCACTTCCACAACGGCATCAGCTTCGGGTGGCCATCGTCACAGTTCGCCGGTGTCCACTAAAAAGAAGAGTGCCAGCAACAAAACTCAATCCAATCCCAAGGACACGCAGCACGAcaactgcagcggcaacagcgccAAGCTAAATCCCCTCGAGACACTCAGCCTTCTGTCGGGCATGCAGTTTCAAGTAGCACGCAATGGCACCGGCACAAATGGTGAACAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGTGTGCTGGTGGCGAATGCAACCAGAGCAACGGACCAGCAGAGCCACAACGAGGACACAGATACACCGAATGCGACCAAGAGCGAGGAGCCATCCCCAATTGAGGAGGCTGGCAATGCGGTCAAACAGGAGACTAGCCAGGAAGTCATTCAGATCCAAAACGAGGAAATCGACGATGAGGATGCGGCACAGACCGCAGATGACATTGTGAATGGAAGCAACAGTGGGACAACAAATGTTGGTGCGGGCTCAGGATTGGtaatgggtgtgggtgtaggtgtaggtgtgggtgtgggtgtgggtgcagGTGCAAGTGCTGTGGGGGGTGTTGGTGGCAATGTGGCTGTGGGCGTATCACTGCTTAAAGATGCTGTGGTCGGTTCATAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLMQAKKDQGGPVLGATHPHQQQQQQQQQQQQSLHHHQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNIHLNHIKRERERDPTPEPVDHEDSPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQASSNSHHHHHQQQQDAASEGEPEDDYGNAEHNTTGNSSTMHDDNEPQQLNGHHHLHHHHHHHHNQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSASNKTQSNPKDTQHDNCSGNSAKLNPLETLSLLSGMQFQVARNGTGTNGEQQLIVNLELNGIKYSGVLVANATRATDQQSHNEDTDTPNATKSEEPSPIEEAGNAVKQETSQEVIQIQNEEIDDEDAAQTADDIVNGSNSGTTNVGAGSGLVMGVGVGVGVGVGVGAGASAVGGVGGNVAVGVSLLKDAVVGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512501;
- 90% Identity
- -
- 80% Identity
- -