Dust005384.1
Basic Information
- Insect
- Drosophila ustulata
- Gene Symbol
- retn
- Assembly
- GCA_035047365.1
- Location
- JAWNPT010000057.1:38425213-38433778[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-26 5.3e-23 81.2 0.0 2 89 20 105 19 105 0.96 2 2 0.84 1.4e+03 -0.2 0.8 7 42 259 298 196 314 0.64
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTACGAAATCAACGATGATCCCAAGCGTAAAGAGTTTCTCGATgatttgttttcgtttatgCAAAAGCGCGGCACGCCAATCAATCGGCTGCCCATAATGGCCAAGTCGGTGCTGGATCTGTATGAGCTATACAATTTGGTGATAGCTCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGCGCCGCATTCACACTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAAAAGAAGAACCTCAGCACCCCAGCCGAACTGCAGGCCGCCATCGACGGCAATCGTCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGCCCATCACTGCcgggtggcatgcaacaaatGTCGCCACTGGCGCTGGTCACACACGCCGCAGCAGCCAACAATCAGCAGGCGGCTGCCGCGGCAGCAGCCGCGCATCGACGATTGATGGGCGGTCCGGCATTTGGCCAGATGCCCAATCTGGTGACACAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCCAAGAAGGAGCAGGGTGGCGGCCCCATTCTCGGCGCCACACATccccaccagcagcagcagcagcagcaacagcaacaacaacagcagcaacagcagtcgctgcaccatcaccagcagcaacagcagctgcagcagcagcaacagcagcagcgacagcgctcTCAGAGCCCCGAGCTGAGCACGCGCGATGCCCTGAGCGCACAAGTGGCGCTCTGGCACATGTATCACAACAGCAGTCCCAATGGTTCGGCACACACCTCACCACAGCAGCGCGAAGCCCTGAACCTCTCCGACTCGCCACCGAACCTGAATCTCAGCCACATCAAGCGCGAACGCGAACGTGATCCAACCCCAGAGCCGGCGGATCACGAGGATGCCACGCATCAGCCGCCGCCAGCCAAGCGCGTGGGCAGCGGCCTGATGCCGCCCGGCTTTCCCGCCAACTTCTACTTGAATCCACACAAcatggcggcggtggcggccatcacccatcaccatcaccatcagcagcagcagcagcaacaggacgCCGTGTCGGAGGGCGAGCCCGAGGATGACTATGGCAATGCGGAGCACAATACCACGGGCAACTCGTCGTCGATGCACGACGACATTGAGCCGCAGCAACTGAATGGAcaccatcatcaccatcatctgCACCATCAGCAGAATCATCTGGACAAATCGGATGATTCGGCCATTGAGAATTCACCCAGCACTTCCACAACGGCGTCCGCATCGGGCGGCCATCGTCACAGCTCGCCGGTGTCCACCAAAAAGAAGAGTGCCAGCAGTAAAGGTCAGTCCAGTGGCAAGGATGCCGAGCACGACGACGACAATTGCACAGGGAGCGGGGAACGCGTCGCCAAGCTGAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGAACTGGTGCGAATGGTGAGCAGCAGTTGATTGTCAACCTGGAGCTAAACGGCATTAAGTACTCGGGTGTGCTGGTCGCCAATGCAGCCAGAGTGGAGCCCAGAGccgactcggactcggacgcACCGAATGCCCCGGCCGAGGAGCCAGCGTCCGAGGAGGTCAAGCATGAGAATAGCCAGGAAGTCAACCAGAACGAGGCAGttgacgaggacgacgacgaggagacGGAGCAGCCCACTGATGACTCTGTGAACGGTGTGGGAGGGGTAGTTGGTGGCGGTGGCGTTGGTGTTGGTGGTGGGGCTGTAGCGGTGGGCGTGTCTGTGCTTAAAGATGCCGTGGTCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQGGGPILGATHPHQQQQQQQQQQQQQQQQSLHHHQQQQQLQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDATHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITHHHHHQQQQQQQDAVSEGEPEDDYGNAEHNTTGNSSSMHDDIEPQQLNGHHHHHHLHHQQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSASSKGQSSGKDAEHDDDNCTGSGERVAKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAARVEPRADSDSDAPNAPAEEPASEEVKHENSQEVNQNEAVDEDDDEETEQPTDDSVNGVGGVVGGGGVGVGGGAVAVGVSVLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512501;
- 90% Identity
- iTF_00508884; iTF_00520412;
- 80% Identity
- -