Dfor012633.1
Basic Information
- Insect
- Drosophila formosana
- Gene Symbol
- retn
- Assembly
- GCA_035045625.1
- Location
- JAWNOW010000654.1:6757408-6766081[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-26 5.2e-23 81.2 0.0 2 89 20 105 19 105 0.96 2 3 3.6 6.3e+03 -2.4 1.2 27 50 206 229 194 275 0.50 3 3 0.96 1.7e+03 -0.5 0.2 9 47 262 304 245 315 0.62
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTACGAAATCAACGATGATCCCAAGCGTAAAGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCAATCAATCGGCTACCCATAATGGCCAAGTCCGTGCTGGATCTGTATGAGCTGTACAATTTGGTGATAGCTCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGCGCCGCATTCACACTGCGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAAAAGAAGAACCTCAGCACCCCAGCCGAACTGCAGGCCGCCATCGACGGCAATCGTCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGCCCATCACTGCcgggtggcatgcaacaaatgTCGCCACTGGCGCTGGTCACACACGCCGCAGCAGCCAACAATCAGCAGGCGGCTGCCGCGGCAGCAGCCGCGCATCGACGATTGATGGGCGGTCCGGCATTTGGCCAGATGCCCAATCTGGTGACACAGGAGATTGAGAATCGCATGATGGAGTATCTACAGCTCATACAGGCCAAGAAGGAGCAGGGCGGCGGCCCCATTCTCGGCGCCACACATccccaccagcagcagcagcagcagcagcaacagcaacaacagcagcagcaacagcagtcgctgcaccatcaccagcagcaacagcagctgcagcaccagcaacagcagcagcgacagcgctCCCAGAGCCCCGAGCTGAGCACGCGCGATGCCCTGAGCGCACAAGTGGCGCTCTGGCACATGTATCACAACAGCAGTCCCAATGGTTCGGCACACACCTCACCACAGCAGCGCGAAGCCCTGAACCTCTCCGACTCGCCACCGAACCTGAATCTCAGCCACATCAAGCGCGAACGCGAACGTGATCCAACCCCAGAGCCGGCGGATCACGAGGATACCACGCATCAGCCGCCGCCAGCCAAGCGCGTGGGCAGCGGCCTGATGCCGCCCGGCTTTCCCGCCAACTTCTACTTGAATCCTCACAACATGGCGGCGGTGGCTGCCATCacccatcatcatcaccatcagcagcagcagcagcagcaacaggacgCCGTGTCGGAGGGCGAGCCAGAGGATGACTTTGGCAATGCGGAGCACAATACCACAGGCAACTCGTCGTCGATACACGACGACATTGAGCCGCAGCAACTGAATGGAcaccatcatcaccatcatctgCACCATCAGCAGAATCATCTGGACAAATCGGATGATTCGGCCATTGAGAATTCACCCAGCACTTCCACAACGGCGTCCGCATCGGGCGGCCATCGTCACAGCTCGCCGGTGTCCACCAAAAAGAAGAGTGCCAGCAGTAAAGGTCAGTCCAGTGGCAAGGATGCCGAGCACGACGACGACAATTGCACAGGGAACGGTGAACGCGTCGCCAAGCTGAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGAACTGGTGCGAATGGTGAGCAGCAGTTGATTGTCAACCTGGAGCTAAACGGCATTAAGTACTCGGGTGTGCTGGTCGCCAATGCAGCCAGAGTGGAGCCCAGAGccgactcggactcggacaCGCCGAACGCTAGTGCTGCCACGTCCGAGGAGCCAGCGTCCGAGGAGGTCAAGCATGAGAATAGCCAGGAAGTCAACCAGAACGAGGCAGttgacgaggacgacgacgaggagacGGAGCAGCCCACTGATGACTCTGTGAACGGTGTGGGAGGCGGTGTGGGCGTGGTAGTTGGTGGCGGTGgcgttggtgttggtgttggtggtGGGGCTGTAGCGGTGGGCGTGTCTGTGCTTAAAGATGCCGTGGTCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQGGGPILGATHPHQQQQQQQQQQQQQQQQQSLHHHQQQQQLQHQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDTTHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITHHHHHQQQQQQQQDAVSEGEPEDDFGNAEHNTTGNSSSIHDDIEPQQLNGHHHHHHLHHQQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSASSKGQSSGKDAEHDDDNCTGNGERVAKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAARVEPRADSDSDTPNASAATSEEPASEEVKHENSQEVNQNEAVDEDDDEETEQPTDDSVNGVGGGVGVVVGGGGVGVGVGGGAVAVGVSVLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00512501;
- 90% Identity
- iTF_00613970;
- 80% Identity
- -