Cmes001520.1
Basic Information
- Insect
- Cybosia mesomella
- Gene Symbol
- Zfy1
- Assembly
- GCA_946251875.1
- Location
- CAMIUH010000042.1:292169-301094[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.075 15 8.2 7.1 1 23 138 161 138 161 0.95 2 18 3.8e-05 0.0074 18.6 1.1 1 23 170 193 170 193 0.96 3 18 0.014 2.8 10.5 0.4 2 23 206 228 206 228 0.97 4 18 0.00058 0.12 14.9 1.1 1 23 237 260 237 260 0.97 5 18 0.00054 0.11 15.0 3.2 1 23 272 295 272 295 0.97 6 18 0.00013 0.026 16.9 0.7 2 23 327 349 326 349 0.97 7 18 0.00091 0.18 14.2 1.6 2 23 359 381 358 381 0.96 8 18 0.13 26 7.4 1.7 3 20 387 404 385 406 0.90 9 18 0.00087 0.17 14.3 0.5 2 21 411 430 410 433 0.94 10 18 0.038 7.5 9.1 1.3 3 23 443 464 441 464 0.95 11 18 0.00023 0.046 16.1 3.6 1 23 469 492 469 492 0.93 12 18 0.00018 0.035 16.5 3.5 2 23 505 527 504 527 0.96 13 18 0.029 5.8 9.5 1.5 1 23 551 574 551 574 0.94 14 18 0.15 29 7.3 0.1 2 23 578 599 577 599 0.93 15 18 0.006 1.2 11.7 1.5 2 23 605 626 604 626 0.97 16 18 9.2 1.8e+03 1.6 1.2 2 23 633 656 632 656 0.86 17 18 0.016 3.1 10.4 0.1 1 23 692 714 692 714 0.97 18 18 0.31 62 6.3 2.8 1 23 720 743 720 743 0.97
Sequence Information
- Coding Sequence
- ATGGAAGACACTGATGTCAAAGTGAAAGTTAAAATTGAAAGAAAAGATCCTACCTCATTTTTGCCTGACGAACCTATGTcttatgaaattaaaaagaaaaagaagaaaaagaaaaagaaggcCATTGAAGATCCATTTAAAGATATTGATGATAAAAGCGTACAACCGGTTACTATAGAAATAGCACCAACCGCTTTCGACCCAGAAGTTAATATAAAAgcagaaaatattgaagttgaaATAGATTTTCATGATATGTTAGAGGGACCGTACAGTGATGAAAGCCTGCGAGATGAGCCAGCTGTGAAAATCGAGAACCAAAATGCCCTTCTGCTCACTTTTGAGAATGTCATCAGTGACAAAAAACTATTGACCCCCAAGGAAGAATTAGATATCCCATCTAAACCGGAACACTTTTGCAAAGTGTGTCATCTAGTTTTCCAATCCACAAAAACGCTAAGAATGCATCAGAAACGGAAACACAAAGTGTTTAGAAAGTCATTCAAACATATTTGTGATTACTGTGGTATGtcatatgaaacaaaaaatagttTAGTGGCACATATTAAGCGGAAACATGGACCAGATTCGACACCTGATGATAAGGAGGAAAGAACTTGTGAAATATGTGCTTTAGTATTTAAAGGTATGGCCAGGCTACGTATGCATATGAGACGGAAACACGGGTCATTCCAGGACTCTTTCATGCATGTTTGTCAAGACTGTGGTCTGACTTATGAGAAATACAGAAGCTTAATAGTTCATATACAACGTAAAcattcaaatcaaataaaaccaGAGATTAGTCAATGGTATAAATGTATGTTTTGTCAAAAGGTGTTTACTAAGAGAGAAACCTATGCAAGACATGTgcaaagaaaacataaaattgcAGATGATACTATAAAGCAAGAGAACCTTGTTGAGAACTCAGAGGCTGATTTGGAGAATTGTAAAAATGAGCAGACAGGTGAAATCACTTGCAAGGAATGTCCTCTAGTCTTTTCATCAGTGAATTTCCTGAAACTGCATATGCGAAGAAAACATAATGCGTTGAAAGAAGACTTCAGATTGAAATGTAGAATTTGCAACTTGTCTTATAACAAGATTGAAAGTCTTAAACGCCACGTAAGACGGAAACATGATAAGGGATCGCATTGCGAAGTGTGCAATAAACAATTTGATTCCAGAGAAATGTATTTGAATCATTCACACACAAAAGTTGTAAAAGAATGCTCAATCTGTGGGCTCATCTTTGCTTCTCAAGGTGGTTTAGCTAAACACTTACGGTGTACGCACAAAATAGACTCACCAAAAACGATATTCTGTAATCTGTGCAATGAAGGTTTTCATGATAAACGTCAACTGAAACCGCATTTAATGAAGGTGCATTTAAAAGTTTCTTACACATGTAAATACtgcaaaaaagtttttaaagcaAAAGAGAGTTACCGAAGACATGTTCTGTTTAAGCATCCTACTACCAATCATGTTAACCACACTCAGTTACAAAAATGTGAGCACTGTACTGAAACATTTAAGGATGAATTTGAACTTTgcaaacatataaatatagtCCACCGGCATATCGATGAGAATTTGCCCAATGAGGTACACATCAAGAAGGAAGatgaagatataaaaaataatttccaGTGCACCAAGTGTCCAGAAATATATTTAACATGGGAACAgttaaaattacattacatacaaTGTCACAATACGACTCAATGTCAGATCTGTGGCGAGGTATTACCTGGAAATGAATTACAAAAGCATATaagaaatttacataaatttcctGAGATGCAATGTAAATATTGCGAGTTTAAAACTAATGTTAAAATTAGCTTGACTCAGCATATGTTGAGACATAAAAACGCTGCAACAATACGTTGTAACTACCCGTTTTGTAGATATAAGACATTCTATGAAGGTGCTATGGAGAAACACAAGAAAAAGCATCTTGAGCAGGGAGTCAAACTCCAATGTACTCAGTGTCCATTTCAAACTATGAATAAGTACATTTTAAAGTATCATGAAGAGGCACATGCAACCGGTATAAAAAGGTATATGTGTGATCAGTGTGATTATGCAACTGTTCTGCCTGCAAACTTAGTGCAGCATAAGTATAAACATTCTACGGAAAAAAGGTTTAAATGCGACGTATGCTCTTTCGCGACGAAGTACAATACGTCATTAAGGTTCCATGTTAGAAAGAAGCACTGTGATCTCCCGACATTCaactaa
- Protein Sequence
- MEDTDVKVKVKIERKDPTSFLPDEPMSYEIKKKKKKKKKKAIEDPFKDIDDKSVQPVTIEIAPTAFDPEVNIKAENIEVEIDFHDMLEGPYSDESLRDEPAVKIENQNALLLTFENVISDKKLLTPKEELDIPSKPEHFCKVCHLVFQSTKTLRMHQKRKHKVFRKSFKHICDYCGMSYETKNSLVAHIKRKHGPDSTPDDKEERTCEICALVFKGMARLRMHMRRKHGSFQDSFMHVCQDCGLTYEKYRSLIVHIQRKHSNQIKPEISQWYKCMFCQKVFTKRETYARHVQRKHKIADDTIKQENLVENSEADLENCKNEQTGEITCKECPLVFSSVNFLKLHMRRKHNALKEDFRLKCRICNLSYNKIESLKRHVRRKHDKGSHCEVCNKQFDSREMYLNHSHTKVVKECSICGLIFASQGGLAKHLRCTHKIDSPKTIFCNLCNEGFHDKRQLKPHLMKVHLKVSYTCKYCKKVFKAKESYRRHVLFKHPTTNHVNHTQLQKCEHCTETFKDEFELCKHINIVHRHIDENLPNEVHIKKEDEDIKNNFQCTKCPEIYLTWEQLKLHYIQCHNTTQCQICGEVLPGNELQKHIRNLHKFPEMQCKYCEFKTNVKISLTQHMLRHKNAATIRCNYPFCRYKTFYEGAMEKHKKKHLEQGVKLQCTQCPFQTMNKYILKYHEEAHATGIKRYMCDQCDYATVLPANLVQHKYKHSTEKRFKCDVCSFATKYNTSLRFHVRKKHCDLPTFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909122; iTF_00795080; iTF_01360976; iTF_00157473; iTF_00823337; iTF_00441840; iTF_00824129; iTF_01198080; iTF_00636790; iTF_01166994; iTF_00638011; iTF_00707232; iTF_01502377;
- 90% Identity
- iTF_00909122;
- 80% Identity
- -