Equa028907.1
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- Zfy1
- Assembly
- GCA_963859945.1
- Location
- OY982585.1:3022898-3026180[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.074 7.4 8.2 7.1 1 23 148 171 148 171 0.95 2 18 3.7e-05 0.0037 18.6 1.1 1 23 180 203 180 203 0.96 3 18 0.014 1.4 10.5 0.4 2 23 216 238 216 238 0.97 4 18 0.00039 0.039 15.4 0.8 1 23 247 270 247 270 0.97 5 18 0.0032 0.32 12.5 3.2 1 23 282 305 282 305 0.96 6 18 0.00014 0.014 16.8 0.7 2 23 337 359 336 359 0.97 7 18 0.0014 0.14 13.7 1.2 2 23 369 391 368 391 0.96 8 18 0.13 13 7.4 1.7 3 20 397 414 395 416 0.90 9 18 0.00086 0.086 14.3 0.5 2 21 421 440 420 443 0.94 10 18 0.064 6.4 8.4 1.8 3 23 453 474 452 474 0.96 11 18 0.0051 0.51 11.8 2.5 1 23 479 502 479 502 0.93 12 18 0.00025 0.025 16.0 1.3 2 23 514 536 513 536 0.96 13 18 0.18 18 7.0 2.9 1 23 560 583 560 584 0.94 14 18 0.049 4.9 8.8 0.1 2 23 588 609 587 609 0.96 15 18 0.032 3.2 9.3 2.0 2 23 615 636 614 636 0.97 16 18 0.96 96 4.7 0.5 2 23 643 666 642 666 0.90 17 18 0.0068 0.68 11.5 0.3 1 23 702 724 702 724 0.97 18 18 0.085 8.5 8.0 2.0 1 23 730 753 730 753 0.97
Sequence Information
- Coding Sequence
- ATGGCAGAGAATGAAATTAAAGTAGAAGTAGAAGTAAAAGTTGAAAGAAAAGATCCTACCTCATTTTTGCCTGAAGAGCCAATGtcttatgaaattaaaaagaagaagaaaaaaaagaaaaaaaataatattgaggaTCCATTTAAAGATATTGATGATAAAATGGATCTGAAGCCTGTAATAACAGAAATAGTACCATCGGCTTTAGACCCGGAAGTTAAtattaaagttgaaaaaattgAAGTTGAATTGGACTTTCATGattttACTGATAATTCAGGCCTTATGTTAGAGGGGCCACATAGTGAGGATAGCCAGGAGCCAGCTGTGAAAATTGAGAATCAAAACCATGAAGCTGTCTTGCTCACTTTTGAGAGTGTAATCAATCCAAGGAAAATGTTGCCTCCAAACGAAGAGCTAGATATGGTACCTAAACCAGAACACTTTTGCAAAGTGTGTCATCTGGTCTTCCAGTCTACGAAAACACTAAGAATGCATCAGAAAAGAAAGCACAAAGTGTTTAGAAAgtcatttaaacatatttgtgatTACTGTGGTATGtcttatgaaacaaaaaacagtttAGTGGCACACATCAAACGTAAACATGGACCAGATTCAATGCCAGATGATAAAGAAGAAAGGACTTGCGAGATATGTGCATTAGTGTTTAAAGGCATGGCCAGGTTACGTATGCATATGAGACGGAAGCATGGATCATTCCAGGACTCCTTTAAGCATGTATGTGAAGACTGTGGTCTGACTTATGATAAATATAGAAGTTTAATAGTCCATATACAACGTAAACATTCTAATCAAACTAAGCCAGAGATTAGTCAGTGGTACAACTGTATGTTTTGTCAGAAGATGTTCACTAAAAGAGAAACGTATGCAAGACATGTTCAGAGAAAGCATAGAATTGCTGATGATAATATAAAGCAAGAAAATCTTGTGGAAAACTTAGAAGCCGATTTGGAAAGTTGTAAAAATCAGCAAACAGGAGAAATCACTTGCAAGGAATGTCCTCTTGTCTTTTCTTCAATCAATTTCCTAAAACTACATATGCGAAGAAAACATAATGCATTAAAGGAGGACTTCAGATTGAAATGTAGGATTTGTAACTTGTCTTATGATAAGATTGAAAGTCTTAAACGCCATGTGAGACGAAAACATGATAAAGGATCACATTGCGAAGTGTGCAATAAACAATTTGATTCCAgagaaatgtatttaaatcactCGCACACAAAAGTTATAAAAGAGTGCTCAATTTGTGGACTCATCTTTGCTTCTCAAGGTGGTTTAGCGAAACATTTAAGGTGTACGCACAAAGTAGACACACCGAAAACGGTCTTCTGCAACTTGTGCAATGAAGGCTTTCATGACAAACGGCAGTTGAAACCACATCTCATGAAAGTGCATTTAAAAGTTTCTTATACATGTATTTACTGCAAGAAAGTGTTTAAAGCAAAAGAGAGTTATCGGCGACATATTCTGTTCAAGCATCCTACTTCAAACTATGTTAACACTCAACTGCAGAAATGTGAGCAATGTTCTGAGATGTTTAAGGATGAATTTGAACTTTgcaaacatataaacatagcTCACAGACACACAGATGAGAGTATGTCAGATGGCATACACATAAAAAGGGAGGATGAAGACATTAAGAACAATTTCCAGTGCACCAAGTGTCCAGAGATATATTTGACCTGGGAACTATTAAAATTGCATTATGAACAATGTCACCACCAACAAACTCAGTGTCAAATTTGTGGGGAAATACTACAAGGAAATGAATTggaaaaacatataaaaactttACATACCAATAATGAGAAGcaatgtaaatattgtgaatttaaaacaaatattaaaataagtctaACACAGCACATGCTGAGACACAAAAATGCAGCAACAATACGTTGCGAGTACCCAGGTTGTCGATATAAGACGTTTTATGAAGGTGCTATGGAAAAACATAGAAGAAAGCACCTTGATCAAGGAGTCAAACTCCAATGTACTCAATGCCCGTTCCAAACCATGAATAAGTACATTTTGAAATATCACGAGGAAGCACATGAAACaggtaaaaaaaggtatacatGCAACCAGTGTGATTATGCTACAATTCTGCCGGCAAATTTAGTGCAACATAAGTATAAACATTCGACAGAAAAACGGTTCAAATGCGACGTGTGCCCATTCGCAACAAAGTACAATACGTCCTTAAGGTTTCATGTAAGAAAAAAACACTGTGATCTCCCAACATTCagctaa
- Protein Sequence
- MAENEIKVEVEVKVERKDPTSFLPEEPMSYEIKKKKKKKKKNNIEDPFKDIDDKMDLKPVITEIVPSALDPEVNIKVEKIEVELDFHDFTDNSGLMLEGPHSEDSQEPAVKIENQNHEAVLLTFESVINPRKMLPPNEELDMVPKPEHFCKVCHLVFQSTKTLRMHQKRKHKVFRKSFKHICDYCGMSYETKNSLVAHIKRKHGPDSMPDDKEERTCEICALVFKGMARLRMHMRRKHGSFQDSFKHVCEDCGLTYDKYRSLIVHIQRKHSNQTKPEISQWYNCMFCQKMFTKRETYARHVQRKHRIADDNIKQENLVENLEADLESCKNQQTGEITCKECPLVFSSINFLKLHMRRKHNALKEDFRLKCRICNLSYDKIESLKRHVRRKHDKGSHCEVCNKQFDSREMYLNHSHTKVIKECSICGLIFASQGGLAKHLRCTHKVDTPKTVFCNLCNEGFHDKRQLKPHLMKVHLKVSYTCIYCKKVFKAKESYRRHILFKHPTSNYVNTQLQKCEQCSEMFKDEFELCKHINIAHRHTDESMSDGIHIKREDEDIKNNFQCTKCPEIYLTWELLKLHYEQCHHQQTQCQICGEILQGNELEKHIKTLHTNNEKQCKYCEFKTNIKISLTQHMLRHKNAATIRCEYPGCRYKTFYEGAMEKHRRKHLDQGVKLQCTQCPFQTMNKYILKYHEEAHETGKKRYTCNQCDYATILPANLVQHKYKHSTEKRFKCDVCPFATKYNTSLRFHVRKKHCDLPTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00405296;
- 90% Identity
- iTF_01502377; iTF_00823337;
- 80% Identity
- -